RNA–Protein interactions for RNA: ENST00000490299.5

RPS6KC1-204, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best)

Gene RPS6KC1, Length 5,154 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-204ENST00000490299 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.42□□□□□ -1.7
RPS6KC1-204ENST00000490299 NOL10Q9BSC4 688 aaKnown RBP4.42□□□□□ -1.7
RPS6KC1-204ENST00000490299 WDR70Q9NW82 654 aa4.42□□□□□ -1.7
RPS6KC1-204ENST00000490299 RRP7AQ9Y3A4 280 aaKnown RBP4.42□□□□□ -1.7
RPS6KC1-204ENST00000490299 CCDC141Q6ZP82 1450 aa4.42□□□□□ -1.7
RPS6KC1-204ENST00000490299 GOLGA6L10A6NI86 522 aa4.42□□□□□ -1.7
RPS6KC1-204ENST00000490299 POTEB2H3BUK9 544 aa4.42□□□□□ -1.7
RPS6KC1-204ENST00000490299 NEMFO60524 1076 aa4.42□□□□□ -1.7
RPS6KC1-204ENST00000490299 FRAT2O75474 233 aaPredicted RBP4.42□□□□□ -1.7
RPS6KC1-204ENST00000490299 GGT6Q6P531 493 aa4.42□□□□□ -1.7
RPS6KC1-204ENST00000490299 PDZRN3Q9UPQ7 1066 aa4.42□□□□□ -1.7
RPS6KC1-204ENST00000490299 ERBINQ96RT1 1412 aa4.42□□□□□ -1.7
RPS6KC1-204ENST00000490299 SSFA2P28290 1259 aa4.42□□□□□ -1.7
RPS6KC1-204ENST00000490299 MCM4P33991 863 aa4.42□□□□□ -1.7
RPS6KC1-204ENST00000490299 TMEM87AQ8NBN3 555 aa4.42□□□□□ -1.7
RPS6KC1-204ENST00000490299 UBE2Q2Q8WVN8 375 aa4.42□□□□□ -1.7
RPS6KC1-204ENST00000490299 TOMM22Q9NS69 142 aa4.42□□□□□ -1.7
RPS6KC1-204ENST00000490299 CALCOCO1Q9P1Z2 691 aa4.42□□□□□ -1.7
RPS6KC1-204ENST00000490299 CTDP1Q9Y5B0 961 aaPredicted RBP4.42□□□□□ -1.7
RPS6KC1-204ENST00000490299 BCORL1Q5H9F3 1711 aa4.41□□□□□ -1.7
RPS6KC1-204ENST00000490299 TDRD9Q8NDG6 1382 aaKnown RBP4.41□□□□□ -1.7
RPS6KC1-204ENST00000490299 INCENPQ9NQS7 918 aa4.41□□□□□ -1.7
RPS6KC1-204ENST00000490299 C9orf78Q9NZ63 289 aaPredicted RBP4.41□□□□□ -1.7
RPS6KC1-204ENST00000490299 ABCC2Q92887 1545 aa4.41□□□□□ -1.7
RPS6KC1-204ENST00000490299 SNAPC4Q5SXM2 1469 aa4.41□□□□□ -1.7
RPS6KC1-204ENST00000490299 EIF4E1BA6NMX2 242 aaKnown RBP4.41□□□□□ -1.7
RPS6KC1-204ENST00000490299 SMTNL1A8MU46 457 aa4.41□□□□□ -1.7
RPS6KC1-204ENST00000490299 PRM3Q9NNZ6 103 aa4.41□□□□□ -1.7
RPS6KC1-204ENST00000490299 PRPF40AO75400 957 aaKnown RBP4.41□□□□□ -1.7
RPS6KC1-204ENST00000490299 PPP2R1AP30153 589 aa4.41□□□□□ -1.7
RPS6KC1-204ENST00000490299 GRM1Q13255 1194 aa4.41□□□□□ -1.7
RPS6KC1-204ENST00000490299 DEF6Q9H4E7 631 aa4.41□□□□□ -1.7
RPS6KC1-204ENST00000490299 MAGEC2Q9UBF1 373 aaPredicted RBP4.41□□□□□ -1.7
RPS6KC1-204ENST00000490299 IGF1RP08069 1367 aa4.41□□□□□ -1.7
RPS6KC1-204ENST00000490299 SMC2O95347 1197 aa4.41□□□□□ -1.7
RPS6KC1-204ENST00000490299 CCT4P50991 539 aaKnown RBP4.41□□□□□ -1.7
RPS6KC1-204ENST00000490299 GPR162Q16538 588 aa4.41□□□□□ -1.7
RPS6KC1-204ENST00000490299 NGDNQ8NEJ9 315 aaKnown RBP4.41□□□□□ -1.7
RPS6KC1-204ENST00000490299 ADGRL2O95490 1459 aa4.4□□□□□ -1.7
RPS6KC1-204ENST00000490299 PAK3O75914 559 aaPredicted RBP4.4□□□□□ -1.7
RPS6KC1-204ENST00000490299 UVSSAQ2YD98 709 aa4.4□□□□□ -1.7
RPS6KC1-204ENST00000490299 NFXL1Q6ZNB6 911 aa4.4□□□□□ -1.7
RPS6KC1-204ENST00000490299 RALYLQ86SE5 291 aaKnown RBP4.4□□□□□ -1.7
RPS6KC1-204ENST00000490299 ANKRD18AQ8IVF6 992 aa4.4□□□□□ -1.7
RPS6KC1-204ENST00000490299 NUP160Q12769 1436 aa4.4□□□□□ -1.7
RPS6KC1-204ENST00000490299 PLXNC1O60486 1568 aa4.4□□□□□ -1.7
RPS6KC1-204ENST00000490299 DYNC1I1O14576 645 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 TXLNAP40222 546 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 KRT85P78386 507 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 TEFQ10587 303 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 MVPQ14764 893 aaKnown RBP4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 CCDC30Q5VVM6 783 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 PRIMPOLQ96LW4 560 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 BCL2L13Q9BXK5 485 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 LNPKQ9C0E8 428 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 TNMDQ9H2S6 317 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 ZNHIT6Q9NWK9 470 aaKnown RBP4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 ABCC11Q96J66 1382 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 NKTRP30414 1462 aaKnown RBP4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 UBTFL1P0CB47 393 aaPredicted RBP4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 SART3Q15020 963 aaKnown RBP4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 MAP9Q49MG5 647 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 ZMYM4Q5VZL5 1548 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 TTC5Q8N0Z6 440 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 PANK1Q8TE04 598 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 DDX11Q96FC9 970 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 SDF4Q9BRK5 362 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 CFAP45Q9UL16 551 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 TRAK1Q9UPV9 953 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 SOX12O15370 315 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 TUBB4AP04350 444 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 CEP57L1Q8IYX8 460 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 PDILTQ8N807 584 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 CYP46A1Q9Y6A2 500 aa4.4□□□□□ -1.71
RPS6KC1-204ENST00000490299 ARHGAP5Q13017 1502 aa4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 PTPRGP23470 1445 aa4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 SPDYE4A6NLX3 237 aa4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 ZSCAN12O43309 604 aa4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 EPS15P42566 896 aa4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 MICALCLQ6ZW33 695 aa4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 FILIP1Q7Z7B0 1213 aa4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 PPFIBP1Q86W92 1011 aa4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 INSRP06213 1382 aa4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 POLR3GO15318 223 aaPredicted RBP4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 NOP2P46087 812 aaKnown RBP4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 NAP1L1P55209 391 aaKnown RBP4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 FKBP5Q13451 457 aaPredicted RBP4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 KRT32Q14532 448 aa4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 GAS2L2Q8NHY3 880 aa4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 EIF4G3O43432 1585 aaKnown RBP4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 CAMSAP2Q08AD1 1489 aa4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 CDKL5O76039 1030 aa4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 CAVIN2O95810 425 aa4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 GNAI2P04899 355 aa4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 STIM1Q13586 685 aa4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 CCDC183Q5T5S1 534 aa4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 TSPYL4Q9UJ04 414 aa4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 SHTN1A0MZ66 631 aa4.39□□□□□ -1.71
RPS6KC1-204ENST00000490299 CTAGE5O15320 804 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms