RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 MDM2Q00987 491 aaPredicted RBP11.91□□□□□ -0.5
SMC6-209ENST00000489535 PRG4Q92954 1404 aaPredicted RBP11.91□□□□□ -0.5
SMC6-209ENST00000489535 LRRC9Q6ZRR7 1453 aa11.9□□□□□ -0.5
SMC6-209ENST00000489535 MAP2K5Q13163 448 aa11.9□□□□□ -0.5
SMC6-209ENST00000489535 KCTD17Q8N5Z5 321 aa11.9□□□□□ -0.5
SMC6-209ENST00000489535 PURBQ96QR8 312 aaKnown RBP11.9□□□□□ -0.5
SMC6-209ENST00000489535 ABCA8O94911 1581 aa11.89□□□□□ -0.51
SMC6-209ENST00000489535 CCNYL3P0C7X3 344 aa11.89□□□□□ -0.51
SMC6-209ENST00000489535 NNTQ13423 1086 aa11.89□□□□□ -0.51
SMC6-209ENST00000489535 EPRSP07814 1512 aaKnown RBP11.88□□□□□ -0.51
SMC6-209ENST00000489535 CDK13Q14004 1512 aaKnown RBP11.88□□□□□ -0.51
SMC6-209ENST00000489535 EHBP1L1Q8N3D4 1523 aa11.88□□□□□ -0.51
SMC6-209ENST00000489535 TIMP2P16035 220 aa11.88□□□□□ -0.51
SMC6-209ENST00000489535 SCARF1Q14162 830 aa11.88□□□□□ -0.51
SMC6-209ENST00000489535 MPNDQ8N594 471 aa11.88□□□□□ -0.51
SMC6-209ENST00000489535 LINC01559Q495D7 138 aa11.87□□□□□ -0.51
SMC6-209ENST00000489535 KANK4Q5T7N3 995 aaPredicted RBP11.87□□□□□ -0.51
SMC6-209ENST00000489535 UNC93B1Q9H1C4 597 aa11.87□□□□□ -0.51
SMC6-209ENST00000489535 MS4A1P11836 297 aa11.86□□□□□ -0.51
SMC6-209ENST00000489535 BAP1Q92560 729 aa11.86□□□□□ -0.51
SMC6-209ENST00000489535 KLF16Q9BXK1 252 aaPredicted RBP11.86□□□□□ -0.51
SMC6-209ENST00000489535 MAGI3Q5TCQ9 1506 aa11.86□□□□□ -0.51
SMC6-209ENST00000489535 NUP153P49790 1475 aaKnown RBP11.85□□□□□ -0.51
SMC6-209ENST00000489535 PLB1Q6P1J6 1458 aa11.85□□□□□ -0.51
SMC6-209ENST00000489535 IRF6O14896 467 aa11.85□□□□□ -0.51
SMC6-209ENST00000489535 PCDHGC3Q9UN70 934 aa11.85□□□□□ -0.51
SMC6-209ENST00000489535 PLEKHG3A1L390 1219 aa11.84□□□□□ -0.51
SMC6-209ENST00000489535 ADH1CP00326 375 aa11.84□□□□□ -0.51
SMC6-209ENST00000489535 VARSP26640 1264 aaKnown RBP11.84□□□□□ -0.51
SMC6-209ENST00000489535 WDR4P57081 412 aaKnown RBP11.84□□□□□ -0.51
SMC6-209ENST00000489535 PTPRNQ16849 979 aa11.84□□□□□ -0.51
SMC6-209ENST00000489535 EVA1BQ9NVM1 165 aa11.84□□□□□ -0.51
SMC6-209ENST00000489535 ADCY10Q96PN6 1610 aa11.84□□□□□ -0.51
SMC6-209ENST00000489535 ZNF511Q8NB15 262 aa11.82□□□□□ -0.52
SMC6-209ENST00000489535 FAM217BQ9NTX9 383 aaPredicted RBP11.82□□□□□ -0.52
SMC6-209ENST00000489535 MTUS2Q5JR59 1369 aa11.81□□□□□ -0.52
SMC6-209ENST00000489535 FDX1P10109 184 aa11.81□□□□□ -0.52
SMC6-209ENST00000489535 ZCCHC11Q5TAX3 1644 aaKnown RBP11.81□□□□□ -0.52
SMC6-209ENST00000489535 ITSN2Q9NZM3 1697 aa11.81□□□□□ -0.52
SMC6-209ENST00000489535 PTPRGP23470 1445 aa11.8□□□□□ -0.52
SMC6-209ENST00000489535 C6orf229H3BNL8 230 aa11.8□□□□□ -0.52
SMC6-209ENST00000489535 KCNH2Q12809 1159 aa11.8□□□□□ -0.52
SMC6-209ENST00000489535 PPFIA3O75145 1194 aa11.79□□□□□ -0.52
SMC6-209ENST00000489535 NUTM1Q86Y26 1132 aa11.79□□□□□ -0.52
SMC6-209ENST00000489535 CDC42BPAQ5VT25 1732 aa11.79□□□□□ -0.52
SMC6-209ENST00000489535 ABCC2Q92887 1545 aa11.79□□□□□ -0.52
SMC6-209ENST00000489535 ARID3CA6NKF2 412 aa11.78□□□□□ -0.52
SMC6-209ENST00000489535 TMEM151AQ8N4L1 468 aa11.78□□□□□ -0.52
SMC6-209ENST00000489535 GPCPD1Q9NPB8 672 aa11.78□□□□□ -0.52
SMC6-209ENST00000489535 KIF14Q15058 1648 aa11.78□□□□□ -0.52
SMC6-209ENST00000489535 RRBP1Q9P2E9 1410 aaKnown RBP11.77□□□□□ -0.52
SMC6-209ENST00000489535 NCOA2Q15596 1464 aa11.77□□□□□ -0.52
SMC6-209ENST00000489535 ARHGEF11O15085 1522 aa11.77□□□□□ -0.52
SMC6-209ENST00000489535 RASSF7Q02833 373 aa11.77□□□□□ -0.53
SMC6-209ENST00000489535 UACAQ9BZF9 1416 aa11.77□□□□□ -0.53
SMC6-209ENST00000489535 MAN1A2O60476 641 aa11.76□□□□□ -0.53
SMC6-209ENST00000489535 MINK1Q8N4C8 1332 aaPredicted RBP11.76□□□□□ -0.53
SMC6-209ENST00000489535 PHLDB1Q86UU1 1377 aa11.76□□□□□ -0.53
SMC6-209ENST00000489535 PTPN23Q9H3S7 1636 aa11.75□□□□□ -0.53
SMC6-209ENST00000489535 GDF11O95390 407 aa11.75□□□□□ -0.53
SMC6-209ENST00000489535 CCDC102AQ96A19 550 aa11.75□□□□□ -0.53
SMC6-209ENST00000489535 ZFAND3Q9H8U3 227 aa11.75□□□□□ -0.53
SMC6-209ENST00000489535 ATP10BO94823 1461 aa11.75□□□□□ -0.53
SMC6-209ENST00000489535 CLCN1P35523 988 aa11.74□□□□□ -0.53
SMC6-209ENST00000489535 KRT76Q01546 638 aa11.74□□□□□ -0.53
SMC6-209ENST00000489535 MYO5CQ9NQX4 1742 aa11.74□□□□□ -0.53
SMC6-209ENST00000489535 UHRF1BP1LA0JNW5 1464 aa11.73□□□□□ -0.53
SMC6-209ENST00000489535 ZIC2O95409 532 aaPredicted RBP11.73□□□□□ -0.53
SMC6-209ENST00000489535 C6orf118Q5T5N4 469 aa11.73□□□□□ -0.53
SMC6-209ENST00000489535 CDK15Q96Q40 435 aa11.73□□□□□ -0.53
SMC6-209ENST00000489535 CDC42BPBQ9Y5S2 1711 aa11.72□□□□□ -0.53
SMC6-209ENST00000489535 RIMBP3CA6NJZ7 1639 aa11.72□□□□□ -0.53
SMC6-209ENST00000489535 RIMBP3BA6NNM3 1639 aa11.72□□□□□ -0.53
SMC6-209ENST00000489535 RIMBP3Q9UFD9 1639 aa11.72□□□□□ -0.53
SMC6-209ENST00000489535 TROQ12816 1431 aaPredicted RBP11.72□□□□□ -0.53
SMC6-209ENST00000489535 CCNB3Q8WWL7 1395 aa11.72□□□□□ -0.53
SMC6-209ENST00000489535 FAM174AQ8TBP5 190 aa11.72□□□□□ -0.53
SMC6-209ENST00000489535 ITPKCQ96DU7 683 aa11.72□□□□□ -0.53
SMC6-209ENST00000489535 MYOM3Q5VTT5 1437 aa11.71□□□□□ -0.53
SMC6-209ENST00000489535 PRR7Q8TB68 274 aa11.71□□□□□ -0.53
SMC6-209ENST00000489535 CDK11AQ9UQ88 783 aaPredicted RBP11.71□□□□□ -0.53
SMC6-209ENST00000489535 FGD6Q6ZV73 1430 aa11.7□□□□□ -0.54
SMC6-209ENST00000489535 DESI1Q6ICB0 168 aa11.7□□□□□ -0.54
SMC6-209ENST00000489535 ADAMTS8Q9UP79 889 aa11.7□□□□□ -0.54
SMC6-209ENST00000489535 PREX2Q70Z35 1606 aa11.69□□□□□ -0.54
SMC6-209ENST00000489535 NR3C2P08235 984 aa11.69□□□□□ -0.54
SMC6-209ENST00000489535 GPR161Q8N6U8 529 aaKnown RBP11.69□□□□□ -0.54
SMC6-209ENST00000489535 CROCC2H7BZ55 1655 aa11.68□□□□□ -0.54
SMC6-209ENST00000489535 RNF225M0QZC1 329 aaPredicted RBP11.68□□□□□ -0.54
SMC6-209ENST00000489535 NDUFV2P19404 249 aa11.68□□□□□ -0.54
SMC6-209ENST00000489535 SPIRE2Q8WWL2 714 aa11.68□□□□□ -0.54
SMC6-209ENST00000489535 KDM5BQ9UGL1 1544 aa11.68□□□□□ -0.54
SMC6-209ENST00000489535 FOXJ1Q92949 421 aa11.67□□□□□ -0.54
SMC6-209ENST00000489535 DNMT3LQ9UJW3 386 aa11.67□□□□□ -0.54
SMC6-209ENST00000489535 ADGBQ8N7X0 1667 aa11.67□□□□□ -0.54
SMC6-209ENST00000489535 TTC37Q6PGP7 1564 aa11.67□□□□□ -0.54
SMC6-209ENST00000489535 SOS2Q07890 1332 aaPredicted RBP11.66□□□□□ -0.54
SMC6-209ENST00000489535 TCOF1Q13428 1488 aaKnown RBP11.66□□□□□ -0.54
SMC6-209ENST00000489535 BMP2P12643 396 aa11.66□□□□□ -0.54
SMC6-209ENST00000489535 LINC00528Q8N1L1 170 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms