RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 MAP3K19Q56UN5 1328 aa19.76■□□□□ 0.75
HLA-F-229ENST00000489502 RRS1Q15050 365 aaKnown RBP19.75■□□□□ 0.75
HLA-F-229ENST00000489502 AMER1Q5JTC6 1135 aaPredicted RBP19.75■□□□□ 0.75
HLA-F-229ENST00000489502 ILDR2Q71H61 639 aa19.75■□□□□ 0.75
HLA-F-229ENST00000489502 PER1O15534 1290 aaPredicted RBP19.74■□□□□ 0.75
HLA-F-229ENST00000489502 AXIN2Q9Y2T1 843 aa19.74■□□□□ 0.75
HLA-F-229ENST00000489502 CCDC9Q9Y3X0 531 aaKnown RBP19.74■□□□□ 0.75
HLA-F-229ENST00000489502 TNNT2P45379 298 aaPredicted RBP19.73■□□□□ 0.75
HLA-F-229ENST00000489502 CNGB1Q14028 1251 aaPredicted RBP19.73■□□□□ 0.75
HLA-F-229ENST00000489502 VPS72Q15906 364 aa19.73■□□□□ 0.75
HLA-F-229ENST00000489502 RGS12O14924 1447 aa19.73■□□□□ 0.75
HLA-F-229ENST00000489502 MAP2P11137 1827 aaKnown RBP19.72■□□□□ 0.75
HLA-F-229ENST00000489502 RTL1A6NKG5 1358 aa19.71■□□□□ 0.75
HLA-F-229ENST00000489502 RXRBP28702 533 aa19.71■□□□□ 0.75
HLA-F-229ENST00000489502 RBM6P78332 1123 aaKnown RBP19.71■□□□□ 0.75
HLA-F-229ENST00000489502 CC2D1BQ5T0F9 858 aaKnown RBP19.71■□□□□ 0.75
HLA-F-229ENST00000489502 LARP1Q6PKG0 1096 aaKnown RBP19.71■□□□□ 0.75
HLA-F-229ENST00000489502 EVA1CP58658 441 aa19.7■□□□□ 0.74
HLA-F-229ENST00000489502 MORC1Q86VD1 984 aa19.7■□□□□ 0.74
HLA-F-229ENST00000489502 GJD4Q96KN9 370 aaPredicted RBP19.7■□□□□ 0.74
HLA-F-229ENST00000489502 EMILIN1Q9Y6C2 1016 aa19.7■□□□□ 0.74
HLA-F-229ENST00000489502 BLMP54132 1417 aaPredicted RBP19.69■□□□□ 0.74
HLA-F-229ENST00000489502 AMPHP49418 695 aa19.69■□□□□ 0.74
HLA-F-229ENST00000489502 SPATA31A5Q5VU36 1347 aa19.69■□□□□ 0.74
HLA-F-229ENST00000489502 SPATA31A7Q8IWB4 1347 aa19.69■□□□□ 0.74
HLA-F-229ENST00000489502 CDK12Q9NYV4 1490 aaPredicted RBP19.68■□□□□ 0.74
HLA-F-229ENST00000489502 WNK3Q9BYP7 1800 aa19.68■□□□□ 0.74
HLA-F-229ENST00000489502 HOXC9P31274 260 aa19.68■□□□□ 0.74
HLA-F-229ENST00000489502 DDX10Q13206 875 aaKnown RBP19.68■□□□□ 0.74
HLA-F-229ENST00000489502 ERBB3P21860 1342 aa19.68■□□□□ 0.74
HLA-F-229ENST00000489502 FAM208AQ9UK61 1670 aaKnown RBP19.68■□□□□ 0.74
HLA-F-229ENST00000489502 NPC1L1Q9UHC9 1359 aa19.68■□□□□ 0.74
HLA-F-229ENST00000489502 CRB1P82279 1406 aa19.68■□□□□ 0.74
HLA-F-229ENST00000489502 CSB-PGBD3P0DP91 1061 aa19.67■□□□□ 0.74
HLA-F-229ENST00000489502 IP6K1Q92551 441 aa19.67■□□□□ 0.74
HLA-F-229ENST00000489502 USP35Q9P2H5 1018 aa19.67■□□□□ 0.74
HLA-F-229ENST00000489502 SPATA31A1Q5TZJ5 1347 aa19.67■□□□□ 0.74
HLA-F-229ENST00000489502 WDR17Q8IZU2 1322 aa19.67■□□□□ 0.74
HLA-F-229ENST00000489502 FLT4P35916 1363 aa19.67■□□□□ 0.74
HLA-F-229ENST00000489502 RGPD2P0DJD1 1756 aa19.67■□□□□ 0.74
HLA-F-229ENST00000489502 THSD7AQ9UPZ6 1657 aa19.66■□□□□ 0.74
HLA-F-229ENST00000489502 LTV1Q96GA3 475 aaPredicted RBP19.66■□□□□ 0.74
HLA-F-229ENST00000489502 SMG6Q86US8 1419 aaKnown RBP19.66■□□□□ 0.74
HLA-F-229ENST00000489502 PPM1GO15355 546 aaPredicted RBP19.65■□□□□ 0.74
HLA-F-229ENST00000489502 ANKRD24Q8TF21 1146 aa19.65■□□□□ 0.74
HLA-F-229ENST00000489502 ZNF316A6NFI3 1004 aaPredicted RBP19.64■□□□□ 0.73
HLA-F-229ENST00000489502 FAM98CQ17RN3 349 aaKnown RBP19.64■□□□□ 0.73
HLA-F-229ENST00000489502 TOM1L2Q6ZVM7 507 aa19.64■□□□□ 0.73
HLA-F-229ENST00000489502 POLKQ9UBT6 870 aa19.64■□□□□ 0.73
HLA-F-229ENST00000489502 BRWD3Q6RI45 1802 aa19.64■□□□□ 0.73
HLA-F-229ENST00000489502 KIF24Q5T7B8 1368 aa19.63■□□□□ 0.73
HLA-F-229ENST00000489502 HSP90AB2PQ58FF8 381 aa19.63■□□□□ 0.73
HLA-F-229ENST00000489502 A0A0G2JS52 829 aa19.62■□□□□ 0.73
HLA-F-229ENST00000489502 MYT1Q01538 1121 aa19.62■□□□□ 0.73
HLA-F-229ENST00000489502 INSRP06213 1382 aa19.61■□□□□ 0.73
HLA-F-229ENST00000489502 NLRP2Q9NX02 1062 aa19.61■□□□□ 0.73
HLA-F-229ENST00000489502 LRRC37A3O60309 1634 aa19.61■□□□□ 0.73
HLA-F-229ENST00000489502 TCP11L2Q8N4U5 519 aa19.6■□□□□ 0.73
HLA-F-229ENST00000489502 PARP4Q9UKK3 1724 aaKnown RBP19.59■□□□□ 0.73
HLA-F-229ENST00000489502 SEPT12Q8IYM1 358 aa19.58■□□□□ 0.72
HLA-F-229ENST00000489502 CARD10Q9BWT7 1032 aa19.58■□□□□ 0.72
HLA-F-229ENST00000489502 DISP2A7MBM2 1401 aa19.57■□□□□ 0.72
HLA-F-229ENST00000489502 BARGINQ6ZT62 677 aa19.56■□□□□ 0.72
HLA-F-229ENST00000489502 USHBP1Q8N6Y0 703 aa19.55■□□□□ 0.72
HLA-F-229ENST00000489502 PARD3Q8TEW0 1356 aa19.55■□□□□ 0.72
HLA-F-229ENST00000489502 ONECUT3O60422 494 aaPredicted RBP19.54■□□□□ 0.72
HLA-F-229ENST00000489502 THRAP3Q9Y2W1 955 aaKnown RBP19.54■□□□□ 0.72
HLA-F-229ENST00000489502 COL3A1P02461 1466 aaPredicted RBP19.54■□□□□ 0.72
HLA-F-229ENST00000489502 MTHFSP49914 203 aa19.53■□□□□ 0.72
HLA-F-229ENST00000489502 EIF4A2Q14240 407 aaKnown RBP19.53■□□□□ 0.72
HLA-F-229ENST00000489502 NBPF6Q5VWK0 638 aa19.53■□□□□ 0.72
HLA-F-229ENST00000489502 NBPF4Q96M43 638 aa19.53■□□□□ 0.72
HLA-F-229ENST00000489502 EP400Q96L91 3159 aa19.52■□□□□ 0.72
HLA-F-229ENST00000489502 MEGF6O75095 1541 aa19.52■□□□□ 0.72
HLA-F-229ENST00000489502 RGPD1P0DJD0 1748 aa19.51■□□□□ 0.71
HLA-F-229ENST00000489502 TNS2Q63HR2 1409 aa19.51■□□□□ 0.71
HLA-F-229ENST00000489502 PPP2R1AP30153 589 aa19.5■□□□□ 0.71
HLA-F-229ENST00000489502 NCAPD2Q15021 1401 aa19.5■□□□□ 0.71
HLA-F-229ENST00000489502 SHANK3Q9BYB0 1731 aa19.48■□□□□ 0.71
HLA-F-229ENST00000489502 IL2RBP14784 551 aa19.48■□□□□ 0.71
HLA-F-229ENST00000489502 FAM182BQ5T319 152 aa19.48■□□□□ 0.71
HLA-F-229ENST00000489502 KRT27Q7Z3Y8 459 aa19.48■□□□□ 0.71
HLA-F-229ENST00000489502 EYA1Q99502 592 aa19.48■□□□□ 0.71
HLA-F-229ENST00000489502 OVOS2A0A0G2JMS6 1433 aa19.46■□□□□ 0.71
HLA-F-229ENST00000489502 DDB1Q16531 1140 aa19.46■□□□□ 0.71
HLA-F-229ENST00000489502 CDCA7Q9BWT1 371 aaPredicted RBP19.46■□□□□ 0.71
HLA-F-229ENST00000489502 IGSF1Q8N6C5 1336 aa19.46■□□□□ 0.71
HLA-F-229ENST00000489502 IL13P35225 146 aa19.44■□□□□ 0.7
HLA-F-229ENST00000489502 PKD1L3Q7Z443 1732 aa19.44■□□□□ 0.7
HLA-F-229ENST00000489502 PDE3BQ13370 1112 aa19.43■□□□□ 0.7
HLA-F-229ENST00000489502 RALBP1Q15311 655 aa19.43■□□□□ 0.7
HLA-F-229ENST00000489502 DIAPH1O60610 1272 aaKnown RBP19.42■□□□□ 0.7
HLA-F-229ENST00000489502 AEBP1Q8IUX7 1158 aa19.42■□□□□ 0.7
HLA-F-229ENST00000489502 RAPGEF4Q8WZA2 1011 aa19.42■□□□□ 0.7
HLA-F-229ENST00000489502 CFAP53Q96M91 514 aa19.41■□□□□ 0.7
HLA-F-229ENST00000489502 SOCS7O14512 581 aa19.4■□□□□ 0.7
HLA-F-229ENST00000489502 TATP17735 454 aaPredicted RBP19.4■□□□□ 0.7
HLA-F-229ENST00000489502 MARCH10Q8NA82 808 aaPredicted RBP19.4■□□□□ 0.7
HLA-F-229ENST00000489502 PRKRIP1Q9H875 184 aaPredicted RBP19.4■□□□□ 0.7
HLA-F-229ENST00000489502 MYBBP1AQ9BQG0 1328 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms