RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 LRRC37A3O60309 1634 aa12.18□□□□□ -0.46
EXOSC3-206ENST00000489414 RGPD8O14715 1765 aaPredicted RBP12.18□□□□□ -0.46
EXOSC3-206ENST00000489414 E9PCH4 1651 aa12.16□□□□□ -0.46
EXOSC3-206ENST00000489414 CTCFP49711 727 aaPredicted RBP12.16□□□□□ -0.46
EXOSC3-206ENST00000489414 MYOM3Q5VTT5 1437 aa12.16□□□□□ -0.46
EXOSC3-206ENST00000489414 C10orf71Q711Q0 1435 aa12.15□□□□□ -0.46
EXOSC3-206ENST00000489414 PHF8Q9UPP1 1060 aa12.15□□□□□ -0.46
EXOSC3-206ENST00000489414 THRAP3Q9Y2W1 955 aaKnown RBP12.14□□□□□ -0.47
EXOSC3-206ENST00000489414 KIAA0232Q92628 1395 aa12.14□□□□□ -0.47
EXOSC3-206ENST00000489414 PRPF38BQ5VTL8 546 aaKnown RBP12.13□□□□□ -0.47
EXOSC3-206ENST00000489414 TUBGCP6Q96RT7 1819 aa12.12□□□□□ -0.47
EXOSC3-206ENST00000489414 SLC4A2P04920 1241 aa12.12□□□□□ -0.47
EXOSC3-206ENST00000489414 SMC1BQ8NDV3 1235 aa12.12□□□□□ -0.47
EXOSC3-206ENST00000489414 CD2APQ9Y5K6 639 aa12.12□□□□□ -0.47
EXOSC3-206ENST00000489414 PXDNLA1KZ92 1463 aa12.12□□□□□ -0.47
EXOSC3-206ENST00000489414 PNPLA7Q6ZV29 1317 aa12.11□□□□□ -0.47
EXOSC3-206ENST00000489414 CHRNA2Q15822 529 aa12.11□□□□□ -0.47
EXOSC3-206ENST00000489414 LARP1Q6PKG0 1096 aaKnown RBP12.11□□□□□ -0.47
EXOSC3-206ENST00000489414 AKAP12Q02952 1782 aa12.1□□□□□ -0.47
EXOSC3-206ENST00000489414 LBX1P52954 281 aa12.1□□□□□ -0.47
EXOSC3-206ENST00000489414 CLTCL1P53675 1640 aa12.09□□□□□ -0.47
EXOSC3-206ENST00000489414 KCNA4P22459 653 aa12.09□□□□□ -0.47
EXOSC3-206ENST00000489414 AKT1S1Q96B36 256 aa12.09□□□□□ -0.47
EXOSC3-206ENST00000489414 DLL1O00548 723 aa12.08□□□□□ -0.48
EXOSC3-206ENST00000489414 ABCB7O75027 752 aa12.08□□□□□ -0.48
EXOSC3-206ENST00000489414 ZNF326Q5BKZ1 582 aaKnown RBP12.08□□□□□ -0.48
EXOSC3-206ENST00000489414 IFT172Q9UG01 1749 aa12.08□□□□□ -0.48
EXOSC3-206ENST00000489414 CUL9Q8IWT3 2517 aa12.07□□□□□ -0.48
EXOSC3-206ENST00000489414 TNRC6CQ9HCJ0 1690 aaKnown RBP12.07□□□□□ -0.48
EXOSC3-206ENST00000489414 EVA1CP58658 441 aa12.07□□□□□ -0.48
EXOSC3-206ENST00000489414 AIDAQ96BJ3 306 aa12.07□□□□□ -0.48
EXOSC3-206ENST00000489414 LMO7Q8WWI1 1683 aa12.06□□□□□ -0.48
EXOSC3-206ENST00000489414 BRD4O60885 1362 aaPredicted RBP12.06□□□□□ -0.48
EXOSC3-206ENST00000489414 A0A0C4DFX4 3053 aa12.06□□□□□ -0.48
EXOSC3-206ENST00000489414 DDB1Q16531 1140 aa12.06□□□□□ -0.48
EXOSC3-206ENST00000489414 MARCH10Q8NA82 808 aaPredicted RBP12.06□□□□□ -0.48
EXOSC3-206ENST00000489414 NHSQ6T4R5 1651 aa12.05□□□□□ -0.48
EXOSC3-206ENST00000489414 IGSF1Q8N6C5 1336 aa12.05□□□□□ -0.48
EXOSC3-206ENST00000489414 ANKRD30AQ9BXX3 1397 aa12.05□□□□□ -0.48
EXOSC3-206ENST00000489414 WAPLQ7Z5K2 1190 aa12.04□□□□□ -0.48
EXOSC3-206ENST00000489414 LRRC4BQ9NT99 713 aa12.04□□□□□ -0.48
EXOSC3-206ENST00000489414 KCPQ6ZWJ8 1503 aa12.04□□□□□ -0.48
EXOSC3-206ENST00000489414 WNK3Q9BYP7 1800 aa12.03□□□□□ -0.48
EXOSC3-206ENST00000489414 HSPA8P11142 646 aaKnown RBP12.03□□□□□ -0.48
EXOSC3-206ENST00000489414 ZNF219Q9P2Y4 722 aaPredicted RBP12.03□□□□□ -0.48
EXOSC3-206ENST00000489414 PLEKHH1Q9ULM0 1364 aa12.03□□□□□ -0.48
EXOSC3-206ENST00000489414 DAPK1P53355 1430 aa12.03□□□□□ -0.48
EXOSC3-206ENST00000489414 APLP2Q06481 763 aa12.02□□□□□ -0.49
EXOSC3-206ENST00000489414 MKRN1Q9UHC7 482 aaKnown RBP12.02□□□□□ -0.49
EXOSC3-206ENST00000489414 PITPNM2Q9BZ72 1349 aa12.02□□□□□ -0.49
EXOSC3-206ENST00000489414 PKD1L3Q7Z443 1732 aa12.02□□□□□ -0.49
EXOSC3-206ENST00000489414 PLEKHG2Q9H7P9 1386 aa12.02□□□□□ -0.49
EXOSC3-206ENST00000489414 CFAP44Q96MT7 982 aa12.01□□□□□ -0.49
EXOSC3-206ENST00000489414 WBP1LQ9NX94 342 aa12.01□□□□□ -0.49
EXOSC3-206ENST00000489414 RRAGCQ9HB90 399 aa12□□□□□ -0.49
EXOSC3-206ENST00000489414 KDM2BQ8NHM5 1336 aa12□□□□□ -0.49
EXOSC3-206ENST00000489414 VIRMAQ69YN4 1812 aaKnown RBP12□□□□□ -0.49
EXOSC3-206ENST00000489414 ZC3H6P61129 1189 aaKnown RBP11.99□□□□□ -0.49
EXOSC3-206ENST00000489414 CRB1P82279 1406 aa11.99□□□□□ -0.49
EXOSC3-206ENST00000489414 COL5A2P05997 1499 aaPredicted RBP11.99□□□□□ -0.49
EXOSC3-206ENST00000489414 KNDC1Q76NI1 1749 aa11.99□□□□□ -0.49
EXOSC3-206ENST00000489414 BTAF1O14981 1849 aa11.99□□□□□ -0.49
EXOSC3-206ENST00000489414 CNTNAP1P78357 1384 aa11.98□□□□□ -0.49
EXOSC3-206ENST00000489414 CREBZFQ9NS37 354 aa11.98□□□□□ -0.49
EXOSC3-206ENST00000489414 TFCP2L1Q9NZI6 479 aa11.98□□□□□ -0.49
EXOSC3-206ENST00000489414 TRPM1Q7Z4N2 1603 aa11.97□□□□□ -0.49
EXOSC3-206ENST00000489414 PIK3C2AO00443 1686 aa11.97□□□□□ -0.49
EXOSC3-206ENST00000489414 ANKRD50Q9ULJ7 1429 aa11.96□□□□□ -0.49
EXOSC3-206ENST00000489414 GPRASP1Q5JY77 1395 aa11.96□□□□□ -0.49
EXOSC3-206ENST00000489414 GCC1Q96CN9 775 aa11.96□□□□□ -0.49
EXOSC3-206ENST00000489414 ANKRD30BQ9BXX2 1392 aa11.95□□□□□ -0.5
EXOSC3-206ENST00000489414 ACIN1Q9UKV3 1341 aaKnown RBP11.95□□□□□ -0.5
EXOSC3-206ENST00000489414 MSL1Q68DK7 614 aa11.95□□□□□ -0.5
EXOSC3-206ENST00000489414 SZT2Q5T011 3432 aa11.95□□□□□ -0.5
EXOSC3-206ENST00000489414 VGFO15240 615 aaPredicted RBP11.94□□□□□ -0.5
EXOSC3-206ENST00000489414 CHIC2Q9UKJ5 165 aa11.94□□□□□ -0.5
EXOSC3-206ENST00000489414 ANKARQ7Z5J8 1434 aa11.94□□□□□ -0.5
EXOSC3-206ENST00000489414 CPDO75976 1380 aa11.93□□□□□ -0.5
EXOSC3-206ENST00000489414 HABP4Q5JVS0 413 aaKnown RBP11.93□□□□□ -0.5
EXOSC3-206ENST00000489414 SLC27A3Q5K4L6 730 aa11.93□□□□□ -0.5
EXOSC3-206ENST00000489414 ABCC11Q96J66 1382 aa11.92□□□□□ -0.5
EXOSC3-206ENST00000489414 QRICH2Q9H0J4 1663 aa11.92□□□□□ -0.5
EXOSC3-206ENST00000489414 C9orf131Q5VYM1 1079 aa11.92□□□□□ -0.5
EXOSC3-206ENST00000489414 COL23A1Q86Y22 540 aaPredicted RBP11.92□□□□□ -0.5
EXOSC3-206ENST00000489414 HIRIP3Q9BW71 556 aaPredicted RBP11.92□□□□□ -0.5
EXOSC3-206ENST00000489414 USP6P35125 1406 aa11.9□□□□□ -0.5
EXOSC3-206ENST00000489414 VEGFBP49765 207 aa11.9□□□□□ -0.5
EXOSC3-206ENST00000489414 CDCA7Q9BWT1 371 aaPredicted RBP11.9□□□□□ -0.5
EXOSC3-206ENST00000489414 STK26Q9P289 416 aa11.9□□□□□ -0.5
EXOSC3-206ENST00000489414 KIAA1551Q9HCM1 1747 aa11.89□□□□□ -0.51
EXOSC3-206ENST00000489414 KIF1BO60333 1816 aa11.89□□□□□ -0.51
EXOSC3-206ENST00000489414 PAK3O75914 559 aaPredicted RBP11.89□□□□□ -0.51
EXOSC3-206ENST00000489414 MCOLN1Q9GZU1 580 aa11.89□□□□□ -0.51
EXOSC3-206ENST00000489414 COL18A1P39060 1754 aa11.89□□□□□ -0.51
EXOSC3-206ENST00000489414 ARHGAP27Q6ZUM4 889 aa11.88□□□□□ -0.51
EXOSC3-206ENST00000489414 ACSBG1Q96GR2 724 aa11.88□□□□□ -0.51
EXOSC3-206ENST00000489414 ADAMTS7Q9UKP4 1686 aa11.87□□□□□ -0.51
EXOSC3-206ENST00000489414 FXR1P51114 621 aaKnown RBP eCLIP11.87□□□□□ -0.51
EXOSC3-206ENST00000489414 SAMD1Q6SPF0 538 aaPredicted RBP11.87□□□□□ -0.51
EXOSC3-206ENST00000489414 PPLO60437 1756 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms