RNA–Protein interactions for RNA: ENST00000489365.1

PRDM1-207, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-207ENST00000489365 TRIM35Q9UPQ4 493 aa7.24□□□□□ -1.25
PRDM1-207ENST00000489365 PAXIP1Q6ZW49 1069 aaPredicted RBP7.23□□□□□ -1.25
PRDM1-207ENST00000489365 SPRYD3Q8NCJ5 442 aa7.23□□□□□ -1.25
PRDM1-207ENST00000489365 ADGRB2O60241 1585 aa7.23□□□□□ -1.25
PRDM1-207ENST00000489365 MARF1Q9Y4F3 1742 aaKnown RBP7.23□□□□□ -1.25
PRDM1-207ENST00000489365 USP32Q8NFA0 1604 aa7.23□□□□□ -1.25
PRDM1-207ENST00000489365 TULP4Q9NRJ4 1543 aa7.22□□□□□ -1.25
PRDM1-207ENST00000489365 SOX12O15370 315 aa7.22□□□□□ -1.25
PRDM1-207ENST00000489365 GTPBP6O43824 516 aaPredicted RBP7.22□□□□□ -1.25
PRDM1-207ENST00000489365 GOLGA2Q08379 1002 aa7.22□□□□□ -1.25
PRDM1-207ENST00000489365 VPS72Q15906 364 aa7.22□□□□□ -1.25
PRDM1-207ENST00000489365 MFRPQ9BY79 579 aa7.22□□□□□ -1.25
PRDM1-207ENST00000489365 PRDM11Q9NQV5 511 aa7.22□□□□□ -1.25
PRDM1-207ENST00000489365 BCL9LQ86UU0 1499 aa7.22□□□□□ -1.25
PRDM1-207ENST00000489365 ITSN1Q15811 1721 aa7.21□□□□□ -1.25
PRDM1-207ENST00000489365 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.21□□□□□ -1.25
PRDM1-207ENST00000489365 ADGRB1O14514 1584 aa7.21□□□□□ -1.25
PRDM1-207ENST00000489365 POTEB2H3BUK9 544 aa7.21□□□□□ -1.26
PRDM1-207ENST00000489365 SRPK2P78362 688 aaKnown RBP7.21□□□□□ -1.26
PRDM1-207ENST00000489365 MKRN3Q13064 507 aaKnown RBP7.21□□□□□ -1.26
PRDM1-207ENST00000489365 CABLES1Q8TDN4 633 aa7.21□□□□□ -1.26
PRDM1-207ENST00000489365 NUDT16Q96DE0 195 aaKnown RBP7.21□□□□□ -1.26
PRDM1-207ENST00000489365 CFAP44Q96MT7 982 aa7.21□□□□□ -1.26
PRDM1-207ENST00000489365 RALGAPBQ86X10 1494 aa7.21□□□□□ -1.26
PRDM1-207ENST00000489365 SLIT2O94813 1529 aa7.21□□□□□ -1.26
PRDM1-207ENST00000489365 EVA1CP58658 441 aa7.2□□□□□ -1.26
PRDM1-207ENST00000489365 KRT27Q7Z3Y8 459 aa7.2□□□□□ -1.26
PRDM1-207ENST00000489365 SEPT12Q8IYM1 358 aa7.2□□□□□ -1.26
PRDM1-207ENST00000489365 PELP1Q8IZL8 1130 aaKnown RBP7.2□□□□□ -1.26
PRDM1-207ENST00000489365 BTG4Q9NY30 223 aa7.2□□□□□ -1.26
PRDM1-207ENST00000489365 NWD2Q9ULI1 1742 aa7.2□□□□□ -1.26
PRDM1-207ENST00000489365 RGPD8O14715 1765 aaPredicted RBP7.2□□□□□ -1.26
PRDM1-207ENST00000489365 BLMP54132 1417 aaPredicted RBP7.19□□□□□ -1.26
PRDM1-207ENST00000489365 ATP7BP35670 1465 aa7.19□□□□□ -1.26
PRDM1-207ENST00000489365 NLRP6P59044 892 aa7.19□□□□□ -1.26
PRDM1-207ENST00000489365 FBXO22Q8NEZ5 403 aa7.19□□□□□ -1.26
PRDM1-207ENST00000489365 SLC39A7Q92504 469 aa7.19□□□□□ -1.26
PRDM1-207ENST00000489365 CDK19Q9BWU1 502 aa7.19□□□□□ -1.26
PRDM1-207ENST00000489365 RYDENQ9NUL5 291 aaKnown RBP7.19□□□□□ -1.26
PRDM1-207ENST00000489365 METRNQ9UJH8 293 aa7.19□□□□□ -1.26
PRDM1-207ENST00000489365 CENPJQ9HC77 1338 aaPredicted RBP7.19□□□□□ -1.26
PRDM1-207ENST00000489365 KIAA1210Q9ULL0 1709 aa7.18□□□□□ -1.26
PRDM1-207ENST00000489365 FAM83GA6ND36 823 aa7.18□□□□□ -1.26
PRDM1-207ENST00000489365 BAG6P46379 1132 aa7.18□□□□□ -1.26
PRDM1-207ENST00000489365 FAM98CQ17RN3 349 aaKnown RBP7.18□□□□□ -1.26
PRDM1-207ENST00000489365 IER5LQ5T953 404 aa7.18□□□□□ -1.26
PRDM1-207ENST00000489365 ABTB2Q8N961 1025 aa7.18□□□□□ -1.26
PRDM1-207ENST00000489365 COL14A1Q05707 1796 aaKnown RBP7.18□□□□□ -1.26
PRDM1-207ENST00000489365 PLCH1Q4KWH8 1693 aa7.17□□□□□ -1.26
PRDM1-207ENST00000489365 POTEMA6NI47 508 aa7.17□□□□□ -1.26
PRDM1-207ENST00000489365 C7P10643 843 aa7.17□□□□□ -1.26
PRDM1-207ENST00000489365 NLRP13Q86W25 1043 aa7.17□□□□□ -1.26
PRDM1-207ENST00000489365 STRN4Q9NRL3 753 aa7.17□□□□□ -1.26
PRDM1-207ENST00000489365 ARHGEF28Q8N1W1 1705 aaKnown RBP7.17□□□□□ -1.26
PRDM1-207ENST00000489365 EVC2Q86UK5 1308 aa7.17□□□□□ -1.26
PRDM1-207ENST00000489365 PRR36Q9H6K5 1346 aa7.17□□□□□ -1.26
PRDM1-207ENST00000489365 BRD4O60885 1362 aaPredicted RBP7.17□□□□□ -1.26
PRDM1-207ENST00000489365 C11orf95C9JLR9 678 aaPredicted RBP7.16□□□□□ -1.26
PRDM1-207ENST00000489365 PDE3BQ13370 1112 aa7.16□□□□□ -1.26
PRDM1-207ENST00000489365 NEUROD1Q13562 356 aa7.16□□□□□ -1.26
PRDM1-207ENST00000489365 NBPF8Q3BBV2 869 aa7.16□□□□□ -1.26
PRDM1-207ENST00000489365 MS4A4AQ96JQ5 239 aa7.16□□□□□ -1.26
PRDM1-207ENST00000489365 ACEP12821 1306 aa7.16□□□□□ -1.26
PRDM1-207ENST00000489365 ROCK2O75116 1388 aaKnown RBP7.16□□□□□ -1.26
PRDM1-207ENST00000489365 GLI3P10071 1580 aa7.16□□□□□ -1.26
PRDM1-207ENST00000489365 ABCA3Q99758 1704 aa7.15□□□□□ -1.26
PRDM1-207ENST00000489365 PLEKHG3A1L390 1219 aa7.15□□□□□ -1.26
PRDM1-207ENST00000489365 ONECUT3O60422 494 aaPredicted RBP7.15□□□□□ -1.26
PRDM1-207ENST00000489365 ZC3H6P61129 1189 aaKnown RBP7.15□□□□□ -1.26
PRDM1-207ENST00000489365 IRX5P78411 483 aaPredicted RBP7.15□□□□□ -1.26
PRDM1-207ENST00000489365 NUTM2GQ5VZR2 741 aa7.15□□□□□ -1.26
PRDM1-207ENST00000489365 MAMSTRQ6ZN01 415 aa7.15□□□□□ -1.26
PRDM1-207ENST00000489365 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.15□□□□□ -1.26
PRDM1-207ENST00000489365 SPATA31A5Q5VU36 1347 aa7.15□□□□□ -1.26
PRDM1-207ENST00000489365 SPATA31A7Q8IWB4 1347 aa7.15□□□□□ -1.26
PRDM1-207ENST00000489365 POLR3AO14802 1390 aaPredicted RBP7.15□□□□□ -1.26
PRDM1-207ENST00000489365 KIAA0232Q92628 1395 aa7.15□□□□□ -1.26
PRDM1-207ENST00000489365 PPIP5K1Q6PFW1 1433 aa7.15□□□□□ -1.27
PRDM1-207ENST00000489365 ALS2Q96Q42 1657 aa7.15□□□□□ -1.27
PRDM1-207ENST00000489365 TRPM3Q9HCF6 1732 aaPredicted RBP7.15□□□□□ -1.27
PRDM1-207ENST00000489365 ZBTB7CA1YPR0 619 aa7.14□□□□□ -1.27
PRDM1-207ENST00000489365 SLC24A1O60721 1099 aa7.14□□□□□ -1.27
PRDM1-207ENST00000489365 POTEGQ6S5H5 508 aa7.14□□□□□ -1.27
PRDM1-207ENST00000489365 FAM196AQ6ZSG2 479 aa7.14□□□□□ -1.27
PRDM1-207ENST00000489365 USP35Q9P2H5 1018 aa7.14□□□□□ -1.27
PRDM1-207ENST00000489365 TONSLQ96HA7 1378 aa7.13□□□□□ -1.27
PRDM1-207ENST00000489365 PPP1R37O75864 691 aa7.13□□□□□ -1.27
PRDM1-207ENST00000489365 CHRNA2Q15822 529 aa7.13□□□□□ -1.27
PRDM1-207ENST00000489365 NBPF1Q3BBV0 1214 aa7.13□□□□□ -1.27
PRDM1-207ENST00000489365 TCP11L2Q8N4U5 519 aa7.13□□□□□ -1.27
PRDM1-207ENST00000489365 KCNH5Q8NCM2 988 aa7.13□□□□□ -1.27
PRDM1-207ENST00000489365 L3MBTL2Q969R5 705 aa7.13□□□□□ -1.27
PRDM1-207ENST00000489365 THRAP3Q9Y2W1 955 aaKnown RBP7.13□□□□□ -1.27
PRDM1-207ENST00000489365 SPATA31A1Q5TZJ5 1347 aa7.12□□□□□ -1.27
PRDM1-207ENST00000489365 GCP02774 474 aa7.12□□□□□ -1.27
PRDM1-207ENST00000489365 DEFB132Q7Z7B7 95 aa7.12□□□□□ -1.27
PRDM1-207ENST00000489365 PDCD7Q8N8D1 485 aaKnown RBP7.12□□□□□ -1.27
PRDM1-207ENST00000489365 OCEL1Q9H607 264 aa7.12□□□□□ -1.27
PRDM1-207ENST00000489365 EP400Q96L91 3159 aa7.12□□□□□ -1.27
PRDM1-207ENST00000489365 QRICH2Q9H0J4 1663 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms