RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 RNF123Q5XPI4 1314 aa23.74■■□□□ 1.39
CD40-206ENST00000489304 GCP02774 474 aa23.74■■□□□ 1.39
CD40-206ENST00000489304 CCDC27Q2M243 656 aa23.74■■□□□ 1.39
CD40-206ENST00000489304 FLT4P35916 1363 aa23.73■■□□□ 1.39
CD40-206ENST00000489304 HMOX1P09601 288 aa23.73■■□□□ 1.39
CD40-206ENST00000489304 WWC1Q8IX03 1113 aa23.73■■□□□ 1.39
CD40-206ENST00000489304 MED1Q15648 1581 aaPredicted RBP23.73■■□□□ 1.39
CD40-206ENST00000489304 SOS2Q07890 1332 aaPredicted RBP23.73■■□□□ 1.39
CD40-206ENST00000489304 ZBTB7CA1YPR0 619 aa23.73■■□□□ 1.39
CD40-206ENST00000489304 HOXC9P31274 260 aa23.73■■□□□ 1.39
CD40-206ENST00000489304 SLFN5Q08AF3 891 aa23.73■■□□□ 1.39
CD40-206ENST00000489304 TRMT2AQ8IZ69 625 aaKnown RBP23.73■■□□□ 1.39
CD40-206ENST00000489304 KCNH5Q8NCM2 988 aa23.73■■□□□ 1.39
CD40-206ENST00000489304 RRP7AQ9Y3A4 280 aaKnown RBP23.73■■□□□ 1.39
CD40-206ENST00000489304 RSPH6AQ9H0K4 717 aa23.72■■□□□ 1.39
CD40-206ENST00000489304 KIF24Q5T7B8 1368 aa23.71■■□□□ 1.39
CD40-206ENST00000489304 DUSP27Q5VZP5 1158 aa23.71■■□□□ 1.39
CD40-206ENST00000489304 RGPD1P0DJD0 1748 aa23.71■■□□□ 1.39
CD40-206ENST00000489304 CABLES1Q8TDN4 633 aa23.7■■□□□ 1.39
CD40-206ENST00000489304 MAPK8IP3Q9UPT6 1336 aa23.7■■□□□ 1.38
CD40-206ENST00000489304 LTN1O94822 1766 aa23.68■■□□□ 1.38
CD40-206ENST00000489304 E9PSI1 815 aa23.68■■□□□ 1.38
CD40-206ENST00000489304 PRKAR2BP31323 418 aa23.68■■□□□ 1.38
CD40-206ENST00000489304 NEUROD2Q15784 382 aa23.68■■□□□ 1.38
CD40-206ENST00000489304 TMPOP42166 694 aaKnown RBP23.67■■□□□ 1.38
CD40-206ENST00000489304 ARHGEF25Q86VW2 580 aa23.67■■□□□ 1.38
CD40-206ENST00000489304 AEBP1Q8IUX7 1158 aa23.67■■□□□ 1.38
CD40-206ENST00000489304 WDR63Q8IWG1 891 aa23.67■■□□□ 1.38
CD40-206ENST00000489304 RCAN3Q9UKA8 241 aa23.67■■□□□ 1.38
CD40-206ENST00000489304 NHSL1Q5SYE7 1610 aa23.67■■□□□ 1.38
CD40-206ENST00000489304 IP6K1Q92551 441 aa23.67■■□□□ 1.38
CD40-206ENST00000489304 LTV1Q96GA3 475 aaPredicted RBP23.67■■□□□ 1.38
CD40-206ENST00000489304 ZC3H6P61129 1189 aaKnown RBP23.66■■□□□ 1.38
CD40-206ENST00000489304 SPINK5Q9NQ38 1064 aaPredicted RBP23.66■■□□□ 1.38
CD40-206ENST00000489304 PHRF1Q9P1Y6 1649 aaKnown RBP23.65■■□□□ 1.38
CD40-206ENST00000489304 RTL1A6NKG5 1358 aa23.65■■□□□ 1.38
CD40-206ENST00000489304 ARHGEF10O15013 1369 aa23.65■■□□□ 1.38
CD40-206ENST00000489304 ERICH6BQ5W0A0 696 aa23.64■■□□□ 1.38
CD40-206ENST00000489304 ROBO1Q9Y6N7 1651 aa23.64■■□□□ 1.38
CD40-206ENST00000489304 SULT6B1Q6IMI4 303 aa23.64■■□□□ 1.37
CD40-206ENST00000489304 PHACTR3Q96KR7 559 aa23.64■■□□□ 1.37
CD40-206ENST00000489304 EYA1Q99502 592 aa23.63■■□□□ 1.37
CD40-206ENST00000489304 NEFMP07197 916 aa23.62■■□□□ 1.37
CD40-206ENST00000489304 TRIM35Q9UPQ4 493 aa23.61■■□□□ 1.37
CD40-206ENST00000489304 CRYBG1Q9Y4K1 1723 aa23.61■■□□□ 1.37
CD40-206ENST00000489304 DLG5Q8TDM6 1919 aa23.6■■□□□ 1.37
CD40-206ENST00000489304 IRX6P78412 446 aaPredicted RBP23.6■■□□□ 1.37
CD40-206ENST00000489304 AXIN2Q9Y2T1 843 aa23.6■■□□□ 1.37
CD40-206ENST00000489304 IGSF1Q8N6C5 1336 aa23.59■■□□□ 1.37
CD40-206ENST00000489304 RIPK4P57078 832 aa23.59■■□□□ 1.37
CD40-206ENST00000489304 NFE2L2Q16236 605 aa23.59■■□□□ 1.37
CD40-206ENST00000489304 PIP4K2BP78356 416 aa23.58■■□□□ 1.37
CD40-206ENST00000489304 RRP1P56182 461 aaKnown RBP23.57■■□□□ 1.36
CD40-206ENST00000489304 CHRNA2Q15822 529 aa23.56■■□□□ 1.36
CD40-206ENST00000489304 USHBP1Q8N6Y0 703 aa23.56■■□□□ 1.36
CD40-206ENST00000489304 IL16Q14005 1332 aa23.56■■□□□ 1.36
CD40-206ENST00000489304 AHDC1Q5TGY3 1603 aaPredicted RBP23.55■■□□□ 1.36
CD40-206ENST00000489304 TOM1O60784 492 aa23.55■■□□□ 1.36
CD40-206ENST00000489304 LRRC59Q96AG4 307 aaKnown RBP23.55■■□□□ 1.36
CD40-206ENST00000489304 KDRP35968 1356 aa23.54■■□□□ 1.36
CD40-206ENST00000489304 KIAA0232Q92628 1395 aa23.54■■□□□ 1.36
CD40-206ENST00000489304 NBPF6Q5VWK0 638 aa23.54■■□□□ 1.36
CD40-206ENST00000489304 ANKRD24Q8TF21 1146 aa23.54■■□□□ 1.36
CD40-206ENST00000489304 NBPF4Q96M43 638 aa23.54■■□□□ 1.36
CD40-206ENST00000489304 UBAP1LF5GYI3 381 aa23.53■■□□□ 1.36
CD40-206ENST00000489304 MYH16Q9H6N6 1097 aa23.53■■□□□ 1.36
CD40-206ENST00000489304 COL18A1P39060 1754 aa23.51■■□□□ 1.35
CD40-206ENST00000489304 CPDO75976 1380 aa23.5■■□□□ 1.35
CD40-206ENST00000489304 HAP1P54257 671 aaPredicted RBP23.5■■□□□ 1.35
CD40-206ENST00000489304 RGPD5Q99666 1765 aa23.49■■□□□ 1.35
CD40-206ENST00000489304 ABCA3Q99758 1704 aa23.49■■□□□ 1.35
CD40-206ENST00000489304 RGPD2P0DJD1 1756 aa23.49■■□□□ 1.35
CD40-206ENST00000489304 LMOD3Q0VAK6 560 aa23.48■■□□□ 1.35
CD40-206ENST00000489304 CERKQ8TCT0 537 aa23.48■■□□□ 1.35
CD40-206ENST00000489304 THUMPD2Q9BTF0 503 aaKnown RBP23.47■■□□□ 1.35
CD40-206ENST00000489304 ERBB3P21860 1342 aa23.46■■□□□ 1.35
CD40-206ENST00000489304 CALD1Q05682 793 aaKnown RBP23.46■■□□□ 1.35
CD40-206ENST00000489304 MTHFSDQ2M296 383 aaKnown RBP23.46■■□□□ 1.35
CD40-206ENST00000489304 PPP4R2Q9NY27 417 aa23.46■■□□□ 1.35
CD40-206ENST00000489304 PHLPP1O60346 1717 aa23.45■■□□□ 1.35
CD40-206ENST00000489304 PRDM11Q9NQV5 511 aa23.45■■□□□ 1.34
CD40-206ENST00000489304 FANCIQ9NVI1 1328 aa23.45■■□□□ 1.34
CD40-206ENST00000489304 COL16A1Q07092 1604 aaPredicted RBP23.45■■□□□ 1.34
CD40-206ENST00000489304 FAM83GA6ND36 823 aa23.45■■□□□ 1.34
CD40-206ENST00000489304 DCTN1Q14203 1278 aa23.43■■□□□ 1.34
CD40-206ENST00000489304 CT47B1P0C2W7 299 aaPredicted RBP23.42■■□□□ 1.34
CD40-206ENST00000489304 NCAPD2Q15021 1401 aa23.42■■□□□ 1.34
CD40-206ENST00000489304 CAMTA1Q9Y6Y1 1673 aa23.42■■□□□ 1.34
CD40-206ENST00000489304 ABCC6O95255 1503 aa23.41■■□□□ 1.34
CD40-206ENST00000489304 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.41■■□□□ 1.34
CD40-206ENST00000489304 TSR2Q969E8 191 aaKnown RBP23.41■■□□□ 1.34
CD40-206ENST00000489304 PLIN1O60240 522 aa23.4■■□□□ 1.34
CD40-206ENST00000489304 CSB-PGBD3P0DP91 1061 aa23.4■■□□□ 1.34
CD40-206ENST00000489304 NLRP2Q9NX02 1062 aa23.4■■□□□ 1.34
CD40-206ENST00000489304 COL22A1Q8NFW1 1626 aaPredicted RBP23.39■■□□□ 1.33
CD40-206ENST00000489304 LMO7Q8WWI1 1683 aa23.39■■□□□ 1.33
CD40-206ENST00000489304 ZNF853P0CG23 659 aa23.39■■□□□ 1.33
CD40-206ENST00000489304 IFT57Q9NWB7 429 aa23.39■■□□□ 1.33
CD40-206ENST00000489304 GNAI1P63096 354 aa23.38■■□□□ 1.33
CD40-206ENST00000489304 RARSP54136 660 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 223 ms