RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 PTPRTO14522 1441 aa12.72□□□□□ -0.37
TRAPPC12-221ENST00000489032 SIGLEC1Q9BZZ2 1709 aa12.72□□□□□ -0.37
TRAPPC12-221ENST00000489032 UHRF1BP1Q6BDS2 1440 aa12.71□□□□□ -0.37
TRAPPC12-221ENST00000489032 APBB1O00213 710 aa12.71□□□□□ -0.37
TRAPPC12-221ENST00000489032 SALL2Q9Y467 1007 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC12-221ENST00000489032 ZMYM4Q5VZL5 1548 aa12.71□□□□□ -0.38
TRAPPC12-221ENST00000489032 ARHGAP35Q9NRY4 1499 aa12.71□□□□□ -0.38
TRAPPC12-221ENST00000489032 CLIP1P30622 1438 aa12.71□□□□□ -0.38
TRAPPC12-221ENST00000489032 FBXO31Q5XUX0 539 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC12-221ENST00000489032 PRR7Q8TB68 274 aa12.7□□□□□ -0.38
TRAPPC12-221ENST00000489032 RNF166Q96A37 237 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC12-221ENST00000489032 MAGI2Q86UL8 1455 aa12.7□□□□□ -0.38
TRAPPC12-221ENST00000489032 LTBP4Q8N2S1 1624 aa12.7□□□□□ -0.38
TRAPPC12-221ENST00000489032 CFAP74Q9C0B2 1584 aa12.69□□□□□ -0.38
TRAPPC12-221ENST00000489032 SETD1BQ9UPS6 1966 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-221ENST00000489032 MCM6Q14566 821 aa12.69□□□□□ -0.38
TRAPPC12-221ENST00000489032 USB1Q9BQ65 265 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-221ENST00000489032 PRM3Q9NNZ6 103 aa12.69□□□□□ -0.38
TRAPPC12-221ENST00000489032 FMN1Q68DA7 1419 aa12.69□□□□□ -0.38
TRAPPC12-221ENST00000489032 ARHGEF12Q9NZN5 1544 aa12.68□□□□□ -0.38
TRAPPC12-221ENST00000489032 RAD21O60216 631 aa12.68□□□□□ -0.38
TRAPPC12-221ENST00000489032 CEBPAP49715 358 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC12-221ENST00000489032 HCSTQ9UBK5 93 aa12.68□□□□□ -0.38
TRAPPC12-221ENST00000489032 BRICD5Q6PL45 260 aa12.67□□□□□ -0.38
TRAPPC12-221ENST00000489032 RNF19BQ6ZMZ0 732 aa12.67□□□□□ -0.38
TRAPPC12-221ENST00000489032 ZMYND15Q9H091 742 aa12.67□□□□□ -0.38
TRAPPC12-221ENST00000489032 CEP162Q5TB80 1403 aa12.66□□□□□ -0.38
TRAPPC12-221ENST00000489032 CFAP99D6REC4 459 aa12.66□□□□□ -0.38
TRAPPC12-221ENST00000489032 SPNS2Q8IVW8 549 aa12.66□□□□□ -0.38
TRAPPC12-221ENST00000489032 MTRQ99707 1265 aa12.66□□□□□ -0.38
TRAPPC12-221ENST00000489032 USP17L8P0C7I0 530 aa12.65□□□□□ -0.38
TRAPPC12-221ENST00000489032 SPSB2Q99619 263 aa12.65□□□□□ -0.38
TRAPPC12-221ENST00000489032 IL21Q9HBE4 155 aa12.65□□□□□ -0.38
TRAPPC12-221ENST00000489032 SNRKQ9NRH2 765 aa12.65□□□□□ -0.38
TRAPPC12-221ENST00000489032 RAPGEF6Q8TEU7 1601 aa12.65□□□□□ -0.38
TRAPPC12-221ENST00000489032 HECW1Q76N89 1606 aa12.64□□□□□ -0.39
TRAPPC12-221ENST00000489032 UBAP1LF5GYI3 381 aa12.64□□□□□ -0.39
TRAPPC12-221ENST00000489032 CTDSPL2Q05D32 466 aa12.64□□□□□ -0.39
TRAPPC12-221ENST00000489032 ZPR1O75312 459 aa12.63□□□□□ -0.39
TRAPPC12-221ENST00000489032 ATP10AO60312 1499 aa12.62□□□□□ -0.39
TRAPPC12-221ENST00000489032 DESI1Q6ICB0 168 aa12.62□□□□□ -0.39
TRAPPC12-221ENST00000489032 THAP11Q96EK4 314 aa12.62□□□□□ -0.39
TRAPPC12-221ENST00000489032 C9orf84Q5VXU9 1444 aa12.62□□□□□ -0.39
TRAPPC12-221ENST00000489032 PLEKHD1A6NEE1 506 aa12.61□□□□□ -0.39
TRAPPC12-221ENST00000489032 MED1Q15648 1581 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC12-221ENST00000489032 NUP153P49790 1475 aaKnown RBP12.59□□□□□ -0.39
TRAPPC12-221ENST00000489032 ADH1BP00325 375 aa12.58□□□□□ -0.4
TRAPPC12-221ENST00000489032 MSS51Q4VC12 460 aa12.58□□□□□ -0.4
TRAPPC12-221ENST00000489032 TJAP1Q5JTD0 557 aa12.58□□□□□ -0.4
TRAPPC12-221ENST00000489032 WWC1Q8IX03 1113 aa12.58□□□□□ -0.4
TRAPPC12-221ENST00000489032 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.57□□□□□ -0.4
TRAPPC12-221ENST00000489032 NCOA1Q15788 1441 aa12.57□□□□□ -0.4
TRAPPC12-221ENST00000489032 SCAPERQ9BY12 1400 aa12.57□□□□□ -0.4
TRAPPC12-221ENST00000489032 JUNDP17535 347 aa12.57□□□□□ -0.4
TRAPPC12-221ENST00000489032 MTMR14Q8NCE2 650 aa12.57□□□□□ -0.4
TRAPPC12-221ENST00000489032 CDK11AQ9UQ88 783 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC12-221ENST00000489032 CASKIN1Q8WXD9 1431 aa12.56□□□□□ -0.4
TRAPPC12-221ENST00000489032 TLL1O43897 1013 aa12.56□□□□□ -0.4
TRAPPC12-221ENST00000489032 LRRN4Q8WUT4 740 aa12.56□□□□□ -0.4
TRAPPC12-221ENST00000489032 CLUAP1Q96AJ1 413 aa12.56□□□□□ -0.4
TRAPPC12-221ENST00000489032 C3P01024 1663 aa12.56□□□□□ -0.4
TRAPPC12-221ENST00000489032 LYPD8Q6UX82 237 aa12.55□□□□□ -0.4
TRAPPC12-221ENST00000489032 PNMA1Q8ND90 353 aa12.55□□□□□ -0.4
TRAPPC12-221ENST00000489032 ZNF516Q92618 1163 aa12.55□□□□□ -0.4
TRAPPC12-221ENST00000489032 ESF1Q9H501 851 aaKnown RBP12.55□□□□□ -0.4
TRAPPC12-221ENST00000489032 TRAPPC8Q9Y2L5 1435 aa12.54□□□□□ -0.4
TRAPPC12-221ENST00000489032 FYCO1Q9BQS8 1478 aa12.54□□□□□ -0.4
TRAPPC12-221ENST00000489032 KCNC4Q03721 635 aa12.54□□□□□ -0.4
TRAPPC12-221ENST00000489032 SLC6A16Q9GZN6 736 aa12.54□□□□□ -0.4
TRAPPC12-221ENST00000489032 NDUFB9Q9Y6M9 179 aa12.54□□□□□ -0.4
TRAPPC12-221ENST00000489032 ZNF335Q9H4Z2 1342 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC12-221ENST00000489032 CCDC18Q5T9S5 1454 aa12.53□□□□□ -0.4
TRAPPC12-221ENST00000489032 A6NJR5 290 aa12.53□□□□□ -0.4
TRAPPC12-221ENST00000489032 HSPA1LP34931 641 aa12.53□□□□□ -0.4
TRAPPC12-221ENST00000489032 FAM160A2Q8N612 972 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC12-221ENST00000489032 PER1O15534 1290 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC12-221ENST00000489032 CTHP32929 405 aa12.52□□□□□ -0.41
TRAPPC12-221ENST00000489032 PTPRNQ16849 979 aa12.52□□□□□ -0.41
TRAPPC12-221ENST00000489032 COG6Q9Y2V7 657 aa12.52□□□□□ -0.41
TRAPPC12-221ENST00000489032 CDK13Q14004 1512 aaKnown RBP12.52□□□□□ -0.41
TRAPPC12-221ENST00000489032 CAMSAP1Q5T5Y3 1602 aa12.51□□□□□ -0.41
TRAPPC12-221ENST00000489032 ABL2P42684 1182 aa12.51□□□□□ -0.41
TRAPPC12-221ENST00000489032 POM121Q96HA1 1249 aa12.51□□□□□ -0.41
TRAPPC12-221ENST00000489032 GDPD2Q9HCC8 539 aa12.51□□□□□ -0.41
TRAPPC12-221ENST00000489032 HMX1Q9NP08 348 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC12-221ENST00000489032 VPS8Q8N3P4 1428 aa12.51□□□□□ -0.41
TRAPPC12-221ENST00000489032 PROSER2Q86WR7 435 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC12-221ENST00000489032 NUDT12Q9BQG2 462 aa12.5□□□□□ -0.41
TRAPPC12-221ENST00000489032 PLCH2O75038 1416 aa12.5□□□□□ -0.41
TRAPPC12-221ENST00000489032 DXOO77932 396 aaKnown RBP12.49□□□□□ -0.41
TRAPPC12-221ENST00000489032 MMP16P51512 607 aa12.49□□□□□ -0.41
TRAPPC12-221ENST00000489032 NR6A1Q15406 480 aa12.49□□□□□ -0.41
TRAPPC12-221ENST00000489032 CCDC24Q8N4L8 307 aa12.49□□□□□ -0.41
TRAPPC12-221ENST00000489032 PRDM9Q9NQV7 894 aa12.49□□□□□ -0.41
TRAPPC12-221ENST00000489032 ZNF518AQ6AHZ1 1483 aa12.48□□□□□ -0.41
TRAPPC12-221ENST00000489032 CCNYL3P0C7X3 344 aa12.48□□□□□ -0.41
TRAPPC12-221ENST00000489032 PIP4K2BP78356 416 aa12.48□□□□□ -0.41
TRAPPC12-221ENST00000489032 MMRN1Q13201 1228 aa12.48□□□□□ -0.41
TRAPPC12-221ENST00000489032 EFCAB2Q5VUJ9 269 aa12.48□□□□□ -0.41
TRAPPC12-221ENST00000489032 TBC1D2BQ9UPU7 963 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms