RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 RTL5Q5HYW3 569 aaPredicted RBP17.39■□□□□ 0.37
CHD1L-208ENST00000488864 PNPLA6Q8IY17 1366 aa17.39■□□□□ 0.37
CHD1L-208ENST00000488864 CCDC146Q8IYE0 955 aa17.38■□□□□ 0.37
CHD1L-208ENST00000488864 KCNH5Q8NCM2 988 aa17.38■□□□□ 0.37
CHD1L-208ENST00000488864 USP19O94966 1318 aa17.38■□□□□ 0.37
CHD1L-208ENST00000488864 U2AF1L5P0DN76 240 aaPredicted RBP17.38■□□□□ 0.37
CHD1L-208ENST00000488864 U2AF1Q01081 240 aaKnown RBP eCLIP17.38■□□□□ 0.372e-6■■□□□ 13.9
CHD1L-208ENST00000488864 NHSL1Q5SYE7 1610 aa17.38■□□□□ 0.37
CHD1L-208ENST00000488864 ARHGEF10O15013 1369 aa17.37■□□□□ 0.37
CHD1L-208ENST00000488864 COL3A1P02461 1466 aaPredicted RBP17.37■□□□□ 0.37
CHD1L-208ENST00000488864 SALL2Q9Y467 1007 aaPredicted RBP17.37■□□□□ 0.37
CHD1L-208ENST00000488864 MED1Q15648 1581 aaPredicted RBP17.37■□□□□ 0.37
CHD1L-208ENST00000488864 PEAK1Q9H792 1746 aa17.36■□□□□ 0.37
CHD1L-208ENST00000488864 USP54Q70EL1 1684 aa17.36■□□□□ 0.37
CHD1L-208ENST00000488864 CDK12Q9NYV4 1490 aaPredicted RBP17.36■□□□□ 0.37
CHD1L-208ENST00000488864 NPM2Q86SE8 214 aaKnown RBP17.36■□□□□ 0.37
CHD1L-208ENST00000488864 NFAT5O94916 1531 aa17.35■□□□□ 0.37
CHD1L-208ENST00000488864 EXOC6Q8TAG9 804 aa17.35■□□□□ 0.37
CHD1L-208ENST00000488864 LTV1Q96GA3 475 aaPredicted RBP17.35■□□□□ 0.37
CHD1L-208ENST00000488864 FLT4P35916 1363 aa17.35■□□□□ 0.37
CHD1L-208ENST00000488864 SHPRHQ149N8 1683 aa17.35■□□□□ 0.37
CHD1L-208ENST00000488864 HOXC9P31274 260 aa17.35■□□□□ 0.37
CHD1L-208ENST00000488864 HAP1P54257 671 aaPredicted RBP17.35■□□□□ 0.37
CHD1L-208ENST00000488864 EIF4A2Q14240 407 aaKnown RBP17.35■□□□□ 0.37
CHD1L-208ENST00000488864 LRRC59Q96AG4 307 aaKnown RBP17.35■□□□□ 0.37
CHD1L-208ENST00000488864 IL13P35225 146 aa17.34■□□□□ 0.37
CHD1L-208ENST00000488864 ARHGEF25Q86VW2 580 aa17.34■□□□□ 0.37
CHD1L-208ENST00000488864 SLIT3O75094 1523 aa17.34■□□□□ 0.37
CHD1L-208ENST00000488864 INSRP06213 1382 aa17.33■□□□□ 0.37
CHD1L-208ENST00000488864 HMOX1P09601 288 aa17.33■□□□□ 0.36
CHD1L-208ENST00000488864 RRP1P56182 461 aaKnown RBP17.33■□□□□ 0.36
CHD1L-208ENST00000488864 CHRNA2Q15822 529 aa17.33■□□□□ 0.36
CHD1L-208ENST00000488864 AHDC1Q5TGY3 1603 aaPredicted RBP17.32■□□□□ 0.36
CHD1L-208ENST00000488864 AXIN2Q9Y2T1 843 aa17.31■□□□□ 0.36
CHD1L-208ENST00000488864 LTN1O94822 1766 aa17.31■□□□□ 0.36
CHD1L-208ENST00000488864 IQSEC2Q5JU85 1478 aa17.31■□□□□ 0.36
CHD1L-208ENST00000488864 IP6K1Q92551 441 aa17.3■□□□□ 0.36
CHD1L-208ENST00000488864 KIAA0232Q92628 1395 aa17.3■□□□□ 0.36
CHD1L-208ENST00000488864 PHLPP1O60346 1717 aa17.29■□□□□ 0.36
CHD1L-208ENST00000488864 PDE4AP27815 886 aa17.29■□□□□ 0.36
CHD1L-208ENST00000488864 LAS1LQ9Y4W2 734 aaKnown RBP17.29■□□□□ 0.36
CHD1L-208ENST00000488864 PHRF1Q9P1Y6 1649 aaKnown RBP17.29■□□□□ 0.36
CHD1L-208ENST00000488864 BLMP54132 1417 aaPredicted RBP17.28■□□□□ 0.36
CHD1L-208ENST00000488864 APAF1O14727 1248 aa17.28■□□□□ 0.36
CHD1L-208ENST00000488864 TCERG1O14776 1098 aaKnown RBP17.28■□□□□ 0.36
CHD1L-208ENST00000488864 AEBP1Q8IUX7 1158 aa17.28■□□□□ 0.36
CHD1L-208ENST00000488864 IL27Q8NEV9 243 aa17.28■□□□□ 0.36
CHD1L-208ENST00000488864 ANO8Q9HCE9 1232 aaPredicted RBP17.27■□□□□ 0.36
CHD1L-208ENST00000488864 PRDM11Q9NQV5 511 aa17.27■□□□□ 0.36
CHD1L-208ENST00000488864 RCAN3Q9UKA8 241 aa17.27■□□□□ 0.36
CHD1L-208ENST00000488864 NEUROD2Q15784 382 aa17.27■□□□□ 0.35
CHD1L-208ENST00000488864 SULT6B1Q6IMI4 303 aa17.27■□□□□ 0.35
CHD1L-208ENST00000488864 EYA1Q99502 592 aa17.27■□□□□ 0.35
CHD1L-208ENST00000488864 RRP7AQ9Y3A4 280 aaKnown RBP17.27■□□□□ 0.35
CHD1L-208ENST00000488864 COL16A1Q07092 1604 aaPredicted RBP17.26■□□□□ 0.35
CHD1L-208ENST00000488864 RTL1A6NKG5 1358 aa17.26■□□□□ 0.35
CHD1L-208ENST00000488864 KIF24Q5T7B8 1368 aa17.26■□□□□ 0.35
CHD1L-208ENST00000488864 CRYBG1Q9Y4K1 1723 aa17.26■□□□□ 0.35
CHD1L-208ENST00000488864 PRKAR2BP31323 418 aa17.26■□□□□ 0.35
CHD1L-208ENST00000488864 USHBP1Q8N6Y0 703 aa17.26■□□□□ 0.35
CHD1L-208ENST00000488864 BACH2Q9BYV9 841 aa17.25■□□□□ 0.35
CHD1L-208ENST00000488864 NUTM2BA6NNL0 878 aaPredicted RBP17.25■□□□□ 0.35
CHD1L-208ENST00000488864 NUTM2EB1AL46 878 aaPredicted RBP17.25■□□□□ 0.35
CHD1L-208ENST00000488864 NUTM2AQ8IVF1 878 aaPredicted RBP17.25■□□□□ 0.35
CHD1L-208ENST00000488864 RUNDC1Q96C34 613 aa17.25■□□□□ 0.35
CHD1L-208ENST00000488864 RSPH6AQ9H0K4 717 aa17.25■□□□□ 0.35
CHD1L-208ENST00000488864 ANKRD24Q8TF21 1146 aa17.24■□□□□ 0.35
CHD1L-208ENST00000488864 FCHSD2O94868 740 aa17.23■□□□□ 0.35
CHD1L-208ENST00000488864 NEFMP07197 916 aa17.23■□□□□ 0.35
CHD1L-208ENST00000488864 TCP11L2Q8N4U5 519 aa17.23■□□□□ 0.35
CHD1L-208ENST00000488864 PLEKHF1Q96S99 279 aa17.23■□□□□ 0.35
CHD1L-208ENST00000488864 ADAMTS2O95450 1211 aa17.22■□□□□ 0.35
CHD1L-208ENST00000488864 NBPF6Q5VWK0 638 aa17.22■□□□□ 0.35
CHD1L-208ENST00000488864 PHACTR3Q96KR7 559 aa17.22■□□□□ 0.35
CHD1L-208ENST00000488864 NBPF4Q96M43 638 aa17.22■□□□□ 0.35
CHD1L-208ENST00000488864 CPDO75976 1380 aa17.22■□□□□ 0.35
CHD1L-208ENST00000488864 FAM83GA6ND36 823 aa17.22■□□□□ 0.35
CHD1L-208ENST00000488864 HSPA1LP34931 641 aa17.22■□□□□ 0.35
CHD1L-208ENST00000488864 MAPK8IP3Q9UPT6 1336 aa17.22■□□□□ 0.35
CHD1L-208ENST00000488864 RGPD5Q99666 1765 aa17.21■□□□□ 0.35
CHD1L-208ENST00000488864 SKAP1Q86WV1 359 aa17.21■□□□□ 0.35
CHD1L-208ENST00000488864 ABCA3Q99758 1704 aa17.21■□□□□ 0.35
CHD1L-208ENST00000488864 PRKCSHP14314 528 aaPredicted RBP17.21■□□□□ 0.35
CHD1L-208ENST00000488864 CDCA7LQ96GN5 454 aa17.21■□□□□ 0.35
CHD1L-208ENST00000488864 ERBB3P21860 1342 aa17.21■□□□□ 0.35
CHD1L-208ENST00000488864 IGSF1Q8N6C5 1336 aa17.21■□□□□ 0.35
CHD1L-208ENST00000488864 CSB-PGBD3P0DP91 1061 aa17.2■□□□□ 0.34
CHD1L-208ENST00000488864 RTN4Q9NQC3 1192 aaKnown RBP17.2■□□□□ 0.34
CHD1L-208ENST00000488864 MS4A1P11836 297 aa17.19■□□□□ 0.34
CHD1L-208ENST00000488864 NLRP2Q9NX02 1062 aa17.19■□□□□ 0.34
CHD1L-208ENST00000488864 PLIN1O60240 522 aa17.18■□□□□ 0.34
CHD1L-208ENST00000488864 STRN4Q9NRL3 753 aa17.18■□□□□ 0.34
CHD1L-208ENST00000488864 PNNQ9H307 717 aaKnown RBP17.18■□□□□ 0.34
CHD1L-208ENST00000488864 RGPD1P0DJD0 1748 aa17.17■□□□□ 0.34
CHD1L-208ENST00000488864 COL18A1P39060 1754 aa17.17■□□□□ 0.34
CHD1L-208ENST00000488864 CAMTA1Q9Y6Y1 1673 aa17.17■□□□□ 0.34
CHD1L-208ENST00000488864 RGPD2P0DJD1 1756 aa17.17■□□□□ 0.34
CHD1L-208ENST00000488864 TMPOP42166 694 aaKnown RBP17.17■□□□□ 0.34
CHD1L-208ENST00000488864 BTG4Q9NY30 223 aa17.16■□□□□ 0.34
CHD1L-208ENST00000488864 COL22A1Q8NFW1 1626 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms