RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 PNISRQ8TF01 805 aaKnown RBP10.13□□□□□ -0.79
APOBEC3A-203ENST00000488758 ANKRD26Q9UPS8 1709 aa10.13□□□□□ -0.79
APOBEC3A-203ENST00000488758 PPM1GO15355 546 aaPredicted RBP10.12□□□□□ -0.79
APOBEC3A-203ENST00000488758 WDR43Q15061 677 aaKnown RBP eCLIP10.12□□□□□ -0.79
APOBEC3A-203ENST00000488758 USP31Q70CQ4 1352 aa10.12□□□□□ -0.79
APOBEC3A-203ENST00000488758 NRKQ7Z2Y5 1582 aa10.11□□□□□ -0.79
APOBEC3A-203ENST00000488758 EVX2Q03828 476 aa10.11□□□□□ -0.79
APOBEC3A-203ENST00000488758 SP7Q8TDD2 431 aaPredicted RBP10.11□□□□□ -0.79
APOBEC3A-203ENST00000488758 DDX17Q92841 729 aaKnown RBP10.11□□□□□ -0.79
APOBEC3A-203ENST00000488758 SOX12O15370 315 aa10.1□□□□□ -0.79
APOBEC3A-203ENST00000488758 PLEKHG5O94827 1062 aa10.1□□□□□ -0.79
APOBEC3A-203ENST00000488758 FBLN1P23142 703 aa10.1□□□□□ -0.79
APOBEC3A-203ENST00000488758 POLKQ9UBT6 870 aa10.1□□□□□ -0.79
APOBEC3A-203ENST00000488758 NUDCQ9Y266 331 aa10.1□□□□□ -0.79
APOBEC3A-203ENST00000488758 AATKQ6ZMQ8 1374 aa10.1□□□□□ -0.79
APOBEC3A-203ENST00000488758 ROBO1Q9Y6N7 1651 aa10.09□□□□□ -0.79
APOBEC3A-203ENST00000488758 CD44P16070 742 aaKnown RBP10.09□□□□□ -0.79
APOBEC3A-203ENST00000488758 PLCD3Q8N3E9 789 aa10.09□□□□□ -0.79
APOBEC3A-203ENST00000488758 KCNH5Q8NCM2 988 aa10.09□□□□□ -0.79
APOBEC3A-203ENST00000488758 SBNO1A3KN83 1393 aa10.09□□□□□ -0.79
APOBEC3A-203ENST00000488758 OVOS2A0A0J9YW53 1432 aa10.08□□□□□ -0.8
APOBEC3A-203ENST00000488758 OVOS2Q6IE36 1432 aa10.08□□□□□ -0.8
APOBEC3A-203ENST00000488758 MAP2P11137 1827 aaKnown RBP10.08□□□□□ -0.8
APOBEC3A-203ENST00000488758 RRS1Q15050 365 aaKnown RBP10.08□□□□□ -0.8
APOBEC3A-203ENST00000488758 PIK3C2AO00443 1686 aa10.07□□□□□ -0.8
APOBEC3A-203ENST00000488758 DIAPH1O60610 1272 aaKnown RBP10.07□□□□□ -0.8
APOBEC3A-203ENST00000488758 AMPHP49418 695 aa10.07□□□□□ -0.8
APOBEC3A-203ENST00000488758 ADAMTS8Q9UP79 889 aa10.07□□□□□ -0.8
APOBEC3A-203ENST00000488758 EMILIN1Q9Y6C2 1016 aa10.07□□□□□ -0.8
APOBEC3A-203ENST00000488758 SOS2Q07890 1332 aaPredicted RBP10.07□□□□□ -0.8
APOBEC3A-203ENST00000488758 SPATA31A3Q5VYP0 1347 aa10.07□□□□□ -0.8
APOBEC3A-203ENST00000488758 ARHGEF10O15013 1369 aa10.06□□□□□ -0.8
APOBEC3A-203ENST00000488758 GCP02774 474 aa10.06□□□□□ -0.8
APOBEC3A-203ENST00000488758 HNRNPUQ00839 825 aaKnown RBP eCLIP10.06□□□□□ -0.8
APOBEC3A-203ENST00000488758 PHLPP1O60346 1717 aa10.05□□□□□ -0.8
APOBEC3A-203ENST00000488758 TRPM3Q9HCF6 1732 aaPredicted RBP10.05□□□□□ -0.8
APOBEC3A-203ENST00000488758 ZBTB7CA1YPR0 619 aa10.05□□□□□ -0.8
APOBEC3A-203ENST00000488758 U2SURPO15042 1029 aaKnown RBP10.05□□□□□ -0.8
APOBEC3A-203ENST00000488758 U2AF1L5P0DN76 240 aaPredicted RBP10.05□□□□□ -0.8
APOBEC3A-203ENST00000488758 U2AF1Q01081 240 aaKnown RBP eCLIP10.05□□□□□ -0.8
APOBEC3A-203ENST00000488758 TNS3Q68CZ2 1445 aa10.05□□□□□ -0.8
APOBEC3A-203ENST00000488758 MAP3K19Q56UN5 1328 aa10.05□□□□□ -0.8
APOBEC3A-203ENST00000488758 PXDNQ92626 1479 aa10.04□□□□□ -0.8
APOBEC3A-203ENST00000488758 INSRP06213 1382 aa10.04□□□□□ -0.8
APOBEC3A-203ENST00000488758 PNPLA6Q8IY17 1366 aa10.04□□□□□ -0.8
APOBEC3A-203ENST00000488758 CENPBP07199 599 aaPredicted RBP10.04□□□□□ -0.8
APOBEC3A-203ENST00000488758 VASPP50552 380 aaPredicted RBP10.04□□□□□ -0.8
APOBEC3A-203ENST00000488758 HAP1P54257 671 aaPredicted RBP10.04□□□□□ -0.8
APOBEC3A-203ENST00000488758 LRRC59Q96AG4 307 aaKnown RBP10.04□□□□□ -0.8
APOBEC3A-203ENST00000488758 USP54Q70EL1 1684 aa10.03□□□□□ -0.8
APOBEC3A-203ENST00000488758 SMG6Q86US8 1419 aaKnown RBP10.03□□□□□ -0.8
APOBEC3A-203ENST00000488758 PNNQ9H307 717 aaKnown RBP10.03□□□□□ -0.8
APOBEC3A-203ENST00000488758 USP19O94966 1318 aa10.03□□□□□ -0.8
APOBEC3A-203ENST00000488758 KIF24Q5T7B8 1368 aa10.02□□□□□ -0.8
APOBEC3A-203ENST00000488758 HOXC9P31274 260 aa10.02□□□□□ -0.81
APOBEC3A-203ENST00000488758 IL13P35225 146 aa10.02□□□□□ -0.81
APOBEC3A-203ENST00000488758 ZC3H6P61129 1189 aaKnown RBP10.02□□□□□ -0.81
APOBEC3A-203ENST00000488758 HSP90AB2PQ58FF8 381 aa10.02□□□□□ -0.81
APOBEC3A-203ENST00000488758 CABLES1Q8TDN4 633 aa10.02□□□□□ -0.81
APOBEC3A-203ENST00000488758 CDK12Q9NYV4 1490 aaPredicted RBP10.02□□□□□ -0.81
APOBEC3A-203ENST00000488758 ALS2Q96Q42 1657 aa10.02□□□□□ -0.81
APOBEC3A-203ENST00000488758 FLT4P35916 1363 aa10.01□□□□□ -0.81
APOBEC3A-203ENST00000488758 NHSL1Q5SYE7 1610 aa10.01□□□□□ -0.81
APOBEC3A-203ENST00000488758 NEFMP07197 916 aa10.01□□□□□ -0.81
APOBEC3A-203ENST00000488758 ARHGEF25Q86VW2 580 aa10.01□□□□□ -0.81
APOBEC3A-203ENST00000488758 CCDC146Q8IYE0 955 aa10.01□□□□□ -0.81
APOBEC3A-203ENST00000488758 IP6K1Q92551 441 aa10.01□□□□□ -0.81
APOBEC3A-203ENST00000488758 RUNDC1Q96C34 613 aa10.01□□□□□ -0.81
APOBEC3A-203ENST00000488758 MARF1Q9Y4F3 1742 aaKnown RBP10.01□□□□□ -0.81
APOBEC3A-203ENST00000488758 SLIT3O75094 1523 aa10.01□□□□□ -0.81
APOBEC3A-203ENST00000488758 COL3A1P02461 1466 aaPredicted RBP10□□□□□ -0.81
APOBEC3A-203ENST00000488758 EIF4A2Q14240 407 aaKnown RBP10□□□□□ -0.81
APOBEC3A-203ENST00000488758 LTV1Q96GA3 475 aaPredicted RBP10□□□□□ -0.81
APOBEC3A-203ENST00000488758 ZBTB47Q9UFB7 747 aaPredicted RBP10□□□□□ -0.81
APOBEC3A-203ENST00000488758 RTL1A6NKG5 1358 aa10□□□□□ -0.81
APOBEC3A-203ENST00000488758 NFAT5O94916 1531 aa9.99□□□□□ -0.81
APOBEC3A-203ENST00000488758 SENP3-EIF4A1A0A087X0R7 540 aa9.99□□□□□ -0.81
APOBEC3A-203ENST00000488758 FCHSD2O94868 740 aa9.99□□□□□ -0.81
APOBEC3A-203ENST00000488758 SALL2Q9Y467 1007 aaPredicted RBP9.99□□□□□ -0.81
APOBEC3A-203ENST00000488758 AHDC1Q5TGY3 1603 aaPredicted RBP9.99□□□□□ -0.81
APOBEC3A-203ENST00000488758 SHPRHQ149N8 1683 aa9.99□□□□□ -0.81
APOBEC3A-203ENST00000488758 BLMP54132 1417 aaPredicted RBP9.99□□□□□ -0.81
APOBEC3A-203ENST00000488758 HMOX1P09601 288 aa9.98□□□□□ -0.81
APOBEC3A-203ENST00000488758 ZBED9Q6R2W3 1325 aa9.98□□□□□ -0.81
APOBEC3A-203ENST00000488758 MAPK8IP3Q9UPT6 1336 aa9.98□□□□□ -0.81
APOBEC3A-203ENST00000488758 LRP6O75581 1613 aa9.97□□□□□ -0.81
APOBEC3A-203ENST00000488758 COL16A1Q07092 1604 aaPredicted RBP9.97□□□□□ -0.81
APOBEC3A-203ENST00000488758 PEAK1Q9H792 1746 aa9.97□□□□□ -0.81
APOBEC3A-203ENST00000488758 LTN1O94822 1766 aa9.97□□□□□ -0.81
APOBEC3A-203ENST00000488758 APAF1O14727 1248 aa9.97□□□□□ -0.81
APOBEC3A-203ENST00000488758 SULT6B1Q6IMI4 303 aa9.97□□□□□ -0.81
APOBEC3A-203ENST00000488758 NGEFQ8N5V2 710 aa9.97□□□□□ -0.81
APOBEC3A-203ENST00000488758 UPF1Q92900 1129 aaKnown RBP eCLIP9.97□□□□□ -0.81
APOBEC3A-203ENST00000488758 PRKAR2BP31323 418 aa9.96□□□□□ -0.82
APOBEC3A-203ENST00000488758 CHRNA2Q15822 529 aa9.96□□□□□ -0.82
APOBEC3A-203ENST00000488758 ZNF579Q8NAF0 562 aaKnown RBP9.96□□□□□ -0.82
APOBEC3A-203ENST00000488758 ANKRD24Q8TF21 1146 aa9.96□□□□□ -0.82
APOBEC3A-203ENST00000488758 EYA1Q99502 592 aa9.96□□□□□ -0.82
APOBEC3A-203ENST00000488758 RSPH6AQ9H0K4 717 aa9.96□□□□□ -0.82
APOBEC3A-203ENST00000488758 PRDM11Q9NQV5 511 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms