RNA–Protein interactions for RNA: ENST00000488631.1

PDPN-206, Transcript of podoplanin, humanhuman

TSL 3

Gene PDPN, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-206ENST00000488631 SSH2Q76I76 1423 aa13.52□□□□□ -0.25
PDPN-206ENST00000488631 CD163L1Q9NR16 1453 aa13.51□□□□□ -0.25
PDPN-206ENST00000488631 LARP1Q6PKG0 1096 aaKnown RBP13.51□□□□□ -0.25
PDPN-206ENST00000488631 LTV1Q96GA3 475 aaPredicted RBP13.51□□□□□ -0.25
PDPN-206ENST00000488631 NSD3Q9BZ95 1437 aa13.5□□□□□ -0.25
PDPN-206ENST00000488631 CPDO75976 1380 aa13.5□□□□□ -0.25
PDPN-206ENST00000488631 CGNL1Q0VF96 1302 aa13.5□□□□□ -0.25
PDPN-206ENST00000488631 PPM1GO15355 546 aaPredicted RBP13.5□□□□□ -0.25
PDPN-206ENST00000488631 ARHGEF25Q86VW2 580 aa13.5□□□□□ -0.25
PDPN-206ENST00000488631 RGS12O14924 1447 aa13.49□□□□□ -0.25
PDPN-206ENST00000488631 FYB1O15117 783 aa13.49□□□□□ -0.25
PDPN-206ENST00000488631 TNNT2P45379 298 aaPredicted RBP13.49□□□□□ -0.25
PDPN-206ENST00000488631 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
PDPN-206ENST00000488631 KNSTRNQ9Y448 316 aa13.49□□□□□ -0.25
PDPN-206ENST00000488631 COL14A1Q05707 1796 aaKnown RBP13.49□□□□□ -0.25
PDPN-206ENST00000488631 AATKQ6ZMQ8 1374 aa13.48□□□□□ -0.25
PDPN-206ENST00000488631 USP31Q70CQ4 1352 aa13.48□□□□□ -0.25
PDPN-206ENST00000488631 SPATA31A5Q5VU36 1347 aa13.48□□□□□ -0.25
PDPN-206ENST00000488631 SPATA31A7Q8IWB4 1347 aa13.48□□□□□ -0.25
PDPN-206ENST00000488631 C11orf95C9JLR9 678 aaPredicted RBP13.48□□□□□ -0.25
PDPN-206ENST00000488631 CARD14Q9BXL6 1004 aa13.48□□□□□ -0.25
PDPN-206ENST00000488631 NLRP2Q9NX02 1062 aa13.48□□□□□ -0.25
PDPN-206ENST00000488631 MARF1Q9Y4F3 1742 aaKnown RBP13.47□□□□□ -0.25
PDPN-206ENST00000488631 KIF7Q2M1P5 1343 aa13.47□□□□□ -0.25
PDPN-206ENST00000488631 NRKQ7Z2Y5 1582 aa13.47□□□□□ -0.25
PDPN-206ENST00000488631 FBLN1P23142 703 aa13.47□□□□□ -0.25
PDPN-206ENST00000488631 PDE3BQ13370 1112 aa13.47□□□□□ -0.25
PDPN-206ENST00000488631 KRT27Q7Z3Y8 459 aa13.47□□□□□ -0.25
PDPN-206ENST00000488631 TCP11L2Q8N4U5 519 aa13.47□□□□□ -0.25
PDPN-206ENST00000488631 AKAP12Q02952 1782 aa13.47□□□□□ -0.25
PDPN-206ENST00000488631 ABCA3Q99758 1704 aa13.47□□□□□ -0.25
PDPN-206ENST00000488631 PIK3C2AO00443 1686 aa13.47□□□□□ -0.25
PDPN-206ENST00000488631 PHRF1Q9P1Y6 1649 aaKnown RBP13.46□□□□□ -0.25
PDPN-206ENST00000488631 SPATA31A1Q5TZJ5 1347 aa13.46□□□□□ -0.25
PDPN-206ENST00000488631 SF3B2Q13435 895 aaKnown RBP13.46□□□□□ -0.25
PDPN-206ENST00000488631 RRS1Q15050 365 aaKnown RBP13.46□□□□□ -0.25
PDPN-206ENST00000488631 AXIN2Q9Y2T1 843 aa13.46□□□□□ -0.25
PDPN-206ENST00000488631 CDK12Q9NYV4 1490 aaPredicted RBP13.46□□□□□ -0.25
PDPN-206ENST00000488631 PLCH1Q4KWH8 1693 aa13.46□□□□□ -0.26
PDPN-206ENST00000488631 SLIT3O75094 1523 aa13.45□□□□□ -0.26
PDPN-206ENST00000488631 ZEB1P37275 1124 aaPredicted RBP13.45□□□□□ -0.26
PDPN-206ENST00000488631 ANKRD24Q8TF21 1146 aa13.45□□□□□ -0.26
PDPN-206ENST00000488631 MON2Q7Z3U7 1717 aa13.44□□□□□ -0.26
PDPN-206ENST00000488631 MORC1Q86VD1 984 aa13.44□□□□□ -0.26
PDPN-206ENST00000488631 WDR17Q8IZU2 1322 aa13.43□□□□□ -0.26
PDPN-206ENST00000488631 IP6K1Q92551 441 aa13.43□□□□□ -0.26
PDPN-206ENST00000488631 THRAP3Q9Y2W1 955 aaKnown RBP13.43□□□□□ -0.26
PDPN-206ENST00000488631 CAMTA1Q9Y6Y1 1673 aa13.43□□□□□ -0.26
PDPN-206ENST00000488631 MAP3K19Q56UN5 1328 aa13.42□□□□□ -0.26
PDPN-206ENST00000488631 NWD2Q9ULI1 1742 aa13.42□□□□□ -0.26
PDPN-206ENST00000488631 OVOS2A0A0J9YW53 1432 aa13.42□□□□□ -0.26
PDPN-206ENST00000488631 CRB1P82279 1406 aa13.42□□□□□ -0.26
PDPN-206ENST00000488631 OVOS2Q6IE36 1432 aa13.42□□□□□ -0.26
PDPN-206ENST00000488631 FAM182BQ5T319 152 aa13.42□□□□□ -0.26
PDPN-206ENST00000488631 UPF1Q92900 1129 aaKnown RBP eCLIP13.42□□□□□ -0.26
PDPN-206ENST00000488631 COL5A2P05997 1499 aaPredicted RBP13.42□□□□□ -0.26
PDPN-206ENST00000488631 DDB1Q16531 1140 aa13.41□□□□□ -0.26
PDPN-206ENST00000488631 BARGINQ6ZT62 677 aa13.41□□□□□ -0.26
PDPN-206ENST00000488631 CARD10Q9BWT7 1032 aa13.41□□□□□ -0.26
PDPN-206ENST00000488631 GLI3P10071 1580 aa13.41□□□□□ -0.26
PDPN-206ENST00000488631 CRYBG1Q9Y4K1 1723 aa13.4□□□□□ -0.26
PDPN-206ENST00000488631 ONECUT3O60422 494 aaPredicted RBP13.4□□□□□ -0.26
PDPN-206ENST00000488631 HOXC9P31274 260 aa13.4□□□□□ -0.26
PDPN-206ENST00000488631 CC2D1BQ5T0F9 858 aaKnown RBP13.4□□□□□ -0.26
PDPN-206ENST00000488631 CCDC7Q96M83 1385 aa13.4□□□□□ -0.26
PDPN-206ENST00000488631 WASHC2AQ641Q2 1341 aa13.39□□□□□ -0.27
PDPN-206ENST00000488631 SMG6Q86US8 1419 aaKnown RBP13.39□□□□□ -0.27
PDPN-206ENST00000488631 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.39□□□□□ -0.27
PDPN-206ENST00000488631 EXOC5O00471 708 aa13.39□□□□□ -0.27
PDPN-206ENST00000488631 CDCA7Q9BWT1 371 aaPredicted RBP13.39□□□□□ -0.27
PDPN-206ENST00000488631 NFAT5O94916 1531 aa13.39□□□□□ -0.27
PDPN-206ENST00000488631 EMILIN1Q9Y6C2 1016 aa13.38□□□□□ -0.27
PDPN-206ENST00000488631 ERBB3P21860 1342 aa13.38□□□□□ -0.27
PDPN-206ENST00000488631 HSP90AB2PQ58FF8 381 aa13.37□□□□□ -0.27
PDPN-206ENST00000488631 NRAPQ86VF7 1730 aa13.36□□□□□ -0.27
PDPN-206ENST00000488631 IL2RBP14784 551 aa13.36□□□□□ -0.27
PDPN-206ENST00000488631 FAM196AQ6ZSG2 479 aa13.36□□□□□ -0.27
PDPN-206ENST00000488631 CCDC125Q86Z20 511 aa13.36□□□□□ -0.27
PDPN-206ENST00000488631 BLMP54132 1417 aaPredicted RBP13.36□□□□□ -0.27
PDPN-206ENST00000488631 NSD2O96028 1365 aa13.35□□□□□ -0.27
PDPN-206ENST00000488631 USHBP1Q8N6Y0 703 aa13.35□□□□□ -0.27
PDPN-206ENST00000488631 RAPGEF4Q8WZA2 1011 aa13.35□□□□□ -0.27
PDPN-206ENST00000488631 MYOM1P52179 1685 aa13.34□□□□□ -0.27
PDPN-206ENST00000488631 RTL1A6NKG5 1358 aa13.34□□□□□ -0.27
PDPN-206ENST00000488631 FLT4P35916 1363 aa13.34□□□□□ -0.27
PDPN-206ENST00000488631 TRIM37O94972 964 aa13.34□□□□□ -0.27
PDPN-206ENST00000488631 DDX54Q8TDD1 881 aaKnown RBP13.34□□□□□ -0.27
PDPN-206ENST00000488631 LMO7Q8WWI1 1683 aa13.34□□□□□ -0.27
PDPN-206ENST00000488631 BAG6P46379 1132 aa13.33□□□□□ -0.28
PDPN-206ENST00000488631 POLKQ9UBT6 870 aa13.33□□□□□ -0.28
PDPN-206ENST00000488631 TATP17735 454 aaPredicted RBP13.32□□□□□ -0.28
PDPN-206ENST00000488631 KIF20BQ96Q89 1820 aa13.32□□□□□ -0.28
PDPN-206ENST00000488631 INSRP06213 1382 aa13.32□□□□□ -0.28
PDPN-206ENST00000488631 APBA3O96018 575 aa13.31□□□□□ -0.28
PDPN-206ENST00000488631 AMER1Q5JTC6 1135 aaPredicted RBP13.31□□□□□ -0.28
PDPN-206ENST00000488631 NBPF6Q5VWK0 638 aa13.31□□□□□ -0.28
PDPN-206ENST00000488631 NBPF4Q96M43 638 aa13.31□□□□□ -0.28
PDPN-206ENST00000488631 ABCC6O95255 1503 aa13.3□□□□□ -0.28
PDPN-206ENST00000488631 DEFB132Q7Z7B7 95 aa13.3□□□□□ -0.28
PDPN-206ENST00000488631 KIF24Q5T7B8 1368 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms