RNA–Protein interactions for RNA: ENST00000488605.1

PHF11-214, Transcript of PHD finger protein 11, humanhuman

TSL 5

Gene PHF11, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-214ENST00000488605 HNRNPUQ00839 825 aaKnown RBP eCLIP13.05□□□□□ -0.32
PHF11-214ENST00000488605 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.05□□□□□ -0.32
PHF11-214ENST00000488605 RBM33Q96EV2 1170 aaKnown RBP13.05□□□□□ -0.32
PHF11-214ENST00000488605 GGNBP2Q9H3C7 697 aa13.05□□□□□ -0.32
PHF11-214ENST00000488605 ACEP12821 1306 aa13.05□□□□□ -0.32
PHF11-214ENST00000488605 ANKRD26Q9UPS8 1709 aa13.05□□□□□ -0.32
PHF11-214ENST00000488605 KIF20BQ96Q89 1820 aa13.04□□□□□ -0.32
PHF11-214ENST00000488605 C14orf37Q86TY3 774 aa13.04□□□□□ -0.32
PHF11-214ENST00000488605 USP6P35125 1406 aa13.04□□□□□ -0.32
PHF11-214ENST00000488605 NRKQ7Z2Y5 1582 aa13.03□□□□□ -0.32
PHF11-214ENST00000488605 TNNT2P45379 298 aaPredicted RBP13.03□□□□□ -0.32
PHF11-214ENST00000488605 CADPS2Q86UW7 1296 aa13.03□□□□□ -0.32
PHF11-214ENST00000488605 POLR3AO14802 1390 aaPredicted RBP13.03□□□□□ -0.32
PHF11-214ENST00000488605 MS4A3Q96HJ5 214 aa13.02□□□□□ -0.33
PHF11-214ENST00000488605 STRCP1A6NGW2 1772 aa13.02□□□□□ -0.33
PHF11-214ENST00000488605 PRKCSHP14314 528 aaPredicted RBP13.01□□□□□ -0.33
PHF11-214ENST00000488605 NME9Q86XW9 330 aa13.01□□□□□ -0.33
PHF11-214ENST00000488605 NGDNQ8NEJ9 315 aaKnown RBP13.01□□□□□ -0.33
PHF11-214ENST00000488605 FBXO22Q8NEZ5 403 aa13.01□□□□□ -0.33
PHF11-214ENST00000488605 PMFBP1Q8TBY8 1022 aa13.01□□□□□ -0.33
PHF11-214ENST00000488605 PHF8Q9UPP1 1060 aa13.01□□□□□ -0.33
PHF11-214ENST00000488605 TTC21BQ7Z4L5 1316 aa13.01□□□□□ -0.33
PHF11-214ENST00000488605 INSRP06213 1382 aa13.01□□□□□ -0.33
PHF11-214ENST00000488605 TMEM94Q12767 1356 aa13.01□□□□□ -0.33
PHF11-214ENST00000488605 NCOA3Q9Y6Q9 1424 aa13.01□□□□□ -0.33
PHF11-214ENST00000488605 WDR43Q15061 677 aaKnown RBP eCLIP13□□□□□ -0.33
PHF11-214ENST00000488605 TRPC6Q9Y210 931 aa13□□□□□ -0.33
PHF11-214ENST00000488605 DCCP43146 1447 aa12.99□□□□□ -0.33
PHF11-214ENST00000488605 BLMP54132 1417 aaPredicted RBP12.99□□□□□ -0.33
PHF11-214ENST00000488605 SSH2Q76I76 1423 aa12.99□□□□□ -0.33
PHF11-214ENST00000488605 SOX12O15370 315 aa12.99□□□□□ -0.33
PHF11-214ENST00000488605 PPP1R37O75864 691 aa12.99□□□□□ -0.33
PHF11-214ENST00000488605 NLRP6P59044 892 aa12.99□□□□□ -0.33
PHF11-214ENST00000488605 NBR1Q14596 966 aa12.99□□□□□ -0.33
PHF11-214ENST00000488605 ZBED9Q6R2W3 1325 aa12.98□□□□□ -0.33
PHF11-214ENST00000488605 TTC21AQ8NDW8 1320 aa12.98□□□□□ -0.33
PHF11-214ENST00000488605 MTHFSP49914 203 aa12.98□□□□□ -0.33
PHF11-214ENST00000488605 COG3Q96JB2 828 aa12.98□□□□□ -0.33
PHF11-214ENST00000488605 CFAP53Q96M91 514 aa12.98□□□□□ -0.33
PHF11-214ENST00000488605 TMEM106CQ9BVX2 250 aa12.98□□□□□ -0.33
PHF11-214ENST00000488605 C19orf44Q9H6X5 657 aa12.98□□□□□ -0.33
PHF11-214ENST00000488605 RGPD8O14715 1765 aaPredicted RBP12.98□□□□□ -0.33
PHF11-214ENST00000488605 OVOS2A0A0J9YW53 1432 aa12.96□□□□□ -0.33
PHF11-214ENST00000488605 OVOS2Q6IE36 1432 aa12.96□□□□□ -0.33
PHF11-214ENST00000488605 ZNF335Q9H4Z2 1342 aaPredicted RBP12.96□□□□□ -0.33
PHF11-214ENST00000488605 C1orf167Q5SNV9 1468 aa12.96□□□□□ -0.34
PHF11-214ENST00000488605 MSH6P52701 1360 aa12.95□□□□□ -0.34
PHF11-214ENST00000488605 ATF3P18847 181 aa12.95□□□□□ -0.34
PHF11-214ENST00000488605 ESCO1Q5FWF5 840 aa12.95□□□□□ -0.34
PHF11-214ENST00000488605 ADAMTS8Q9UP79 889 aa12.95□□□□□ -0.34
PHF11-214ENST00000488605 AATKQ6ZMQ8 1374 aa12.94□□□□□ -0.34
PHF11-214ENST00000488605 LRRC7Q96NW7 1537 aa12.94□□□□□ -0.34
PHF11-214ENST00000488605 SHPRHQ149N8 1683 aa12.94□□□□□ -0.34
PHF11-214ENST00000488605 COL3A1P02461 1466 aaPredicted RBP12.94□□□□□ -0.34
PHF11-214ENST00000488605 MST1RQ04912 1400 aa12.94□□□□□ -0.34
PHF11-214ENST00000488605 SMG6Q86US8 1419 aaKnown RBP12.94□□□□□ -0.34
PHF11-214ENST00000488605 USP31Q70CQ4 1352 aa12.93□□□□□ -0.34
PHF11-214ENST00000488605 PIK3C2AO00443 1686 aa12.93□□□□□ -0.34
PHF11-214ENST00000488605 KIF1AQ12756 1690 aa12.93□□□□□ -0.34
PHF11-214ENST00000488605 ORAI2Q96SN7 254 aa12.92□□□□□ -0.34
PHF11-214ENST00000488605 POLKQ9UBT6 870 aa12.92□□□□□ -0.34
PHF11-214ENST00000488605 PNPLA6Q8IY17 1366 aa12.92□□□□□ -0.34
PHF11-214ENST00000488605 CDK12Q9NYV4 1490 aaPredicted RBP12.91□□□□□ -0.34
PHF11-214ENST00000488605 GOLGA2Q08379 1002 aa12.91□□□□□ -0.34
PHF11-214ENST00000488605 TPRNQ4KMQ1 711 aa12.91□□□□□ -0.34
PHF11-214ENST00000488605 FBLN1P23142 703 aa12.9□□□□□ -0.34
PHF11-214ENST00000488605 MS4A4AQ96JQ5 239 aa12.9□□□□□ -0.34
PHF11-214ENST00000488605 EMILIN1Q9Y6C2 1016 aa12.9□□□□□ -0.34
PHF11-214ENST00000488605 XIRP1Q702N8 1843 aaKnown RBP12.9□□□□□ -0.34
PHF11-214ENST00000488605 USP54Q70EL1 1684 aa12.89□□□□□ -0.35
PHF11-214ENST00000488605 SENP3-EIF4A1A0A087X0R7 540 aa12.89□□□□□ -0.35
PHF11-214ENST00000488605 PSME1Q06323 249 aa12.89□□□□□ -0.35
PHF11-214ENST00000488605 NUDCQ9Y266 331 aa12.89□□□□□ -0.35
PHF11-214ENST00000488605 PPM1GO15355 546 aaPredicted RBP12.88□□□□□ -0.35
PHF11-214ENST00000488605 RRS1Q15050 365 aaKnown RBP12.88□□□□□ -0.35
PHF11-214ENST00000488605 CCDC146Q8IYE0 955 aa12.88□□□□□ -0.35
PHF11-214ENST00000488605 FOXO3O43524 673 aa12.87□□□□□ -0.35
PHF11-214ENST00000488605 DIAPH1O60610 1272 aaKnown RBP12.87□□□□□ -0.35
PHF11-214ENST00000488605 ABTB2Q8N961 1025 aa12.87□□□□□ -0.35
PHF11-214ENST00000488605 WDR70Q9NW82 654 aa12.87□□□□□ -0.35
PHF11-214ENST00000488605 U2AF1L5P0DN76 240 aaPredicted RBP12.86□□□□□ -0.35
PHF11-214ENST00000488605 U2AF1Q01081 240 aaKnown RBP eCLIP12.86□□□□□ -0.35
PHF11-214ENST00000488605 NUTM2GQ5VZR2 741 aa12.86□□□□□ -0.35
PHF11-214ENST00000488605 SALL2Q9Y467 1007 aaPredicted RBP12.86□□□□□ -0.35
PHF11-214ENST00000488605 TRPM3Q9HCF6 1732 aaPredicted RBP12.85□□□□□ -0.35
PHF11-214ENST00000488605 MARF1Q9Y4F3 1742 aaKnown RBP12.85□□□□□ -0.35
PHF11-214ENST00000488605 TTLL13PA6NNM8 815 aa12.85□□□□□ -0.35
PHF11-214ENST00000488605 U2SURPO15042 1029 aaKnown RBP12.85□□□□□ -0.35
PHF11-214ENST00000488605 GALR2O43603 387 aaPredicted RBP12.85□□□□□ -0.35
PHF11-214ENST00000488605 TIE1P35590 1138 aa12.85□□□□□ -0.35
PHF11-214ENST00000488605 XPCQ01831 940 aaPredicted RBP12.85□□□□□ -0.35
PHF11-214ENST00000488605 KRT28Q7Z3Y7 464 aa12.85□□□□□ -0.35
PHF11-214ENST00000488605 DCBLD2Q96PD2 775 aa12.85□□□□□ -0.35
PHF11-214ENST00000488605 MAP2P11137 1827 aaKnown RBP12.85□□□□□ -0.35
PHF11-214ENST00000488605 IQSEC2Q5JU85 1478 aa12.85□□□□□ -0.35
PHF11-214ENST00000488605 CLCN6P51797 869 aa12.84□□□□□ -0.35
PHF11-214ENST00000488605 MKRN3Q13064 507 aaKnown RBP12.84□□□□□ -0.35
PHF11-214ENST00000488605 RUNDC1Q96C34 613 aa12.84□□□□□ -0.35
PHF11-214ENST00000488605 BMP2KQ9NSY1 1161 aaPredicted RBP12.84□□□□□ -0.35
PHF11-214ENST00000488605 MAP3K19Q56UN5 1328 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms