RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 MIA2Q96PC5 1412 aa9.2□□□□□ -0.94
CDHR3-213ENST00000488386 CAMSAP1Q5T5Y3 1602 aa9.2□□□□□ -0.94
CDHR3-213ENST00000488386 CFHP08603 1231 aa9.19□□□□□ -0.94
CDHR3-213ENST00000488386 SSTR3P32745 418 aaPredicted RBP9.19□□□□□ -0.94
CDHR3-213ENST00000488386 APLP1P51693 650 aa9.19□□□□□ -0.94
CDHR3-213ENST00000488386 PPP4CP60510 307 aa9.19□□□□□ -0.94
CDHR3-213ENST00000488386 NEUROD2Q15784 382 aa9.19□□□□□ -0.94
CDHR3-213ENST00000488386 RSPH4AQ5TD94 716 aa9.19□□□□□ -0.94
CDHR3-213ENST00000488386 KDM4CQ9H3R0 1056 aa9.19□□□□□ -0.94
CDHR3-213ENST00000488386 CHIC2Q9UKJ5 165 aa9.19□□□□□ -0.94
CDHR3-213ENST00000488386 ABCC5O15440 1437 aa9.19□□□□□ -0.94
CDHR3-213ENST00000488386 CEP152O94986 1710 aa9.19□□□□□ -0.94
CDHR3-213ENST00000488386 FGD6Q6ZV73 1430 aa9.18□□□□□ -0.94
CDHR3-213ENST00000488386 SULF1Q8IWU6 871 aa9.18□□□□□ -0.94
CDHR3-213ENST00000488386 KDM5DQ9BY66 1539 aa9.18□□□□□ -0.94
CDHR3-213ENST00000488386 PLSCR2Q9NRY7 297 aa9.18□□□□□ -0.94
CDHR3-213ENST00000488386 RRP7BPQ9NSQ0 103 aa9.18□□□□□ -0.94
CDHR3-213ENST00000488386 CFAP65Q6ZU64 1925 aaKnown RBP9.17□□□□□ -0.94
CDHR3-213ENST00000488386 DNMT1P26358 1616 aaKnown RBP9.17□□□□□ -0.94
CDHR3-213ENST00000488386 MROH1Q8NDA8 1641 aa9.17□□□□□ -0.94
CDHR3-213ENST00000488386 CEP170BQ9Y4F5 1589 aaPredicted RBP9.17□□□□□ -0.94
CDHR3-213ENST00000488386 DAPK1P53355 1430 aa9.17□□□□□ -0.94
CDHR3-213ENST00000488386 NPATQ14207 1427 aa9.17□□□□□ -0.94
CDHR3-213ENST00000488386 WASHC2CQ9Y4E1 1318 aa9.17□□□□□ -0.94
CDHR3-213ENST00000488386 ZNF142P52746 1687 aaPredicted RBP9.16□□□□□ -0.94
CDHR3-213ENST00000488386 TCOF1Q13428 1488 aaKnown RBP9.16□□□□□ -0.94
CDHR3-213ENST00000488386 NCOA1Q15788 1441 aa9.16□□□□□ -0.94
CDHR3-213ENST00000488386 FAM50AQ14320 339 aaKnown RBP9.16□□□□□ -0.94
CDHR3-213ENST00000488386 RNF17Q9BXT8 1623 aaKnown RBP9.16□□□□□ -0.94
CDHR3-213ENST00000488386 ABCC3O15438 1527 aa9.15□□□□□ -0.94
CDHR3-213ENST00000488386 KIF15Q9NS87 1388 aa9.15□□□□□ -0.94
CDHR3-213ENST00000488386 GCGRP47871 477 aa9.15□□□□□ -0.94
CDHR3-213ENST00000488386 SLC4A3P48751 1232 aa9.15□□□□□ -0.94
CDHR3-213ENST00000488386 FBXO41Q8TF61 875 aa9.15□□□□□ -0.94
CDHR3-213ENST00000488386 HCSTQ9UBK5 93 aa9.15□□□□□ -0.94
CDHR3-213ENST00000488386 PZPP20742 1482 aa9.15□□□□□ -0.95
CDHR3-213ENST00000488386 TNRQ92752 1358 aa9.14□□□□□ -0.95
CDHR3-213ENST00000488386 EIF2AK4Q9P2K8 1649 aaKnown RBP9.14□□□□□ -0.95
CDHR3-213ENST00000488386 BEGAINQ9BUH8 593 aa9.14□□□□□ -0.95
CDHR3-213ENST00000488386 FAM117AQ9C073 453 aa9.14□□□□□ -0.95
CDHR3-213ENST00000488386 DUOX2Q9NRD8 1548 aa9.14□□□□□ -0.95
CDHR3-213ENST00000488386 SHANK2Q9UPX8 1470 aa9.14□□□□□ -0.95
CDHR3-213ENST00000488386 FUT2Q10981 343 aa9.12□□□□□ -0.95
CDHR3-213ENST00000488386 A2ML1A8K2U0 1454 aa9.12□□□□□ -0.95
CDHR3-213ENST00000488386 PTPRTO14522 1441 aa9.12□□□□□ -0.95
CDHR3-213ENST00000488386 ZNF335Q9H4Z2 1342 aaPredicted RBP9.11□□□□□ -0.95
CDHR3-213ENST00000488386 ZC3H13Q5T200 1668 aaKnown RBP9.11□□□□□ -0.95
CDHR3-213ENST00000488386 PLEKHG3A1L390 1219 aa9.11□□□□□ -0.95
CDHR3-213ENST00000488386 ACTN4O43707 911 aaKnown RBP9.11□□□□□ -0.95
CDHR3-213ENST00000488386 ITGAEP38570 1179 aa9.11□□□□□ -0.95
CDHR3-213ENST00000488386 KMT5BQ4FZB7 885 aa9.11□□□□□ -0.95
CDHR3-213ENST00000488386 HLA-CQ95604 372 aa9.11□□□□□ -0.95
CDHR3-213ENST00000488386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.11□□□□□ -0.95
CDHR3-213ENST00000488386 ERVK-7P63135 1459 aa9.1□□□□□ -0.95
CDHR3-213ENST00000488386 LTBP4Q8N2S1 1624 aa9.1□□□□□ -0.95
CDHR3-213ENST00000488386 PUS10Q3MIT2 529 aaKnown RBP9.1□□□□□ -0.95
CDHR3-213ENST00000488386 NECTIN2Q92692 538 aa9.1□□□□□ -0.95
CDHR3-213ENST00000488386 ERBINQ96RT1 1412 aa9.1□□□□□ -0.95
CDHR3-213ENST00000488386 NEURL4Q96JN8 1562 aa9.1□□□□□ -0.95
CDHR3-213ENST00000488386 POLR1AO95602 1720 aaPredicted RBP9.1□□□□□ -0.95
CDHR3-213ENST00000488386 ANKRD30AQ9BXX3 1397 aa9.1□□□□□ -0.95
CDHR3-213ENST00000488386 PRDM15P57071 1507 aaPredicted RBP9.1□□□□□ -0.95
CDHR3-213ENST00000488386 PLA2R1Q13018 1463 aa9.09□□□□□ -0.95
CDHR3-213ENST00000488386 SPATA31D1Q6ZQQ2 1576 aa9.09□□□□□ -0.95
CDHR3-213ENST00000488386 NYAP1Q6ZVC0 841 aa9.09□□□□□ -0.95
CDHR3-213ENST00000488386 SPIRE2Q8WWL2 714 aa9.09□□□□□ -0.95
CDHR3-213ENST00000488386 FAM135AQ9P2D6 1515 aa9.09□□□□□ -0.95
CDHR3-213ENST00000488386 DEPDC5O75140 1603 aa9.09□□□□□ -0.95
CDHR3-213ENST00000488386 UGGT1Q9NYU2 1555 aa9.08□□□□□ -0.96
CDHR3-213ENST00000488386 KDM4AO75164 1064 aa9.08□□□□□ -0.96
CDHR3-213ENST00000488386 GUCA2AQ02747 115 aa9.08□□□□□ -0.96
CDHR3-213ENST00000488386 BLOC1S3Q6QNY0 202 aa9.08□□□□□ -0.96
CDHR3-213ENST00000488386 HOXA2O43364 376 aa9.07□□□□□ -0.96
CDHR3-213ENST00000488386 COPS2P61201 443 aa9.07□□□□□ -0.96
CDHR3-213ENST00000488386 MTRQ99707 1265 aa9.07□□□□□ -0.96
CDHR3-213ENST00000488386 PRR14Q9BWN1 585 aa9.07□□□□□ -0.96
CDHR3-213ENST00000488386 TBC1D2Q9BYX2 928 aa9.07□□□□□ -0.96
CDHR3-213ENST00000488386 PCDHB3Q9Y5E6 796 aa9.07□□□□□ -0.96
CDHR3-213ENST00000488386 ADGRL2O95490 1459 aa9.07□□□□□ -0.96
CDHR3-213ENST00000488386 UBR1Q8IWV7 1749 aa9.06□□□□□ -0.96
CDHR3-213ENST00000488386 TJAP1Q5JTD0 557 aa9.06□□□□□ -0.96
CDHR3-213ENST00000488386 NLRP1Q9C000 1473 aa9.06□□□□□ -0.96
CDHR3-213ENST00000488386 PIK3C2BO00750 1634 aa9.05□□□□□ -0.96
CDHR3-213ENST00000488386 VWDEQ8N2E2 1590 aa9.05□□□□□ -0.96
CDHR3-213ENST00000488386 MORN1Q5T089 497 aa9.05□□□□□ -0.96
CDHR3-213ENST00000488386 NUTM1Q86Y26 1132 aa9.05□□□□□ -0.96
CDHR3-213ENST00000488386 IL27Q8NEV9 243 aa9.05□□□□□ -0.96
CDHR3-213ENST00000488386 ZNF516Q92618 1163 aa9.05□□□□□ -0.96
CDHR3-213ENST00000488386 ANKRD50Q9ULJ7 1429 aa9.05□□□□□ -0.96
CDHR3-213ENST00000488386 SYNMO15061 1565 aa9.04□□□□□ -0.96
CDHR3-213ENST00000488386 KANK1Q14678 1352 aa9.04□□□□□ -0.96
CDHR3-213ENST00000488386 MOXD2PA6NHM9 499 aa9.04□□□□□ -0.96
CDHR3-213ENST00000488386 NDUFV2P19404 249 aa9.04□□□□□ -0.96
CDHR3-213ENST00000488386 ATP6V1AP38606 617 aa9.04□□□□□ -0.96
CDHR3-213ENST00000488386 MYSM1Q5VVJ2 828 aa9.04□□□□□ -0.96
CDHR3-213ENST00000488386 THEMISQ8N1K5 641 aaPredicted RBP9.04□□□□□ -0.96
CDHR3-213ENST00000488386 DDRGK1Q96HY6 314 aa9.04□□□□□ -0.96
CDHR3-213ENST00000488386 NPHP4O75161 1426 aaPredicted RBP9.04□□□□□ -0.96
CDHR3-213ENST00000488386 TLL1O43897 1013 aa9.03□□□□□ -0.96
CDHR3-213ENST00000488386 ANKLE2Q86XL3 938 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms