RNA–Protein interactions for RNA: ENST00000488166.1

ITSN1-230, Transcript of intersectin 1, humanhuman

TSL 3

Gene ITSN1, Length 986 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-230ENST00000488166 OVOS2A0A0J9YW53 1432 aa24.24■■□□□ 1.47
ITSN1-230ENST00000488166 CPSF1Q10570 1443 aaKnown RBP24.24■■□□□ 1.47
ITSN1-230ENST00000488166 OVOS2Q6IE36 1432 aa24.24■■□□□ 1.47
ITSN1-230ENST00000488166 C11orf95C9JLR9 678 aaPredicted RBP24.23■■□□□ 1.47
ITSN1-230ENST00000488166 TTC21AQ8NDW8 1320 aa24.23■■□□□ 1.47
ITSN1-230ENST00000488166 KTN1Q86UP2 1357 aaKnown RBP24.23■■□□□ 1.47
ITSN1-230ENST00000488166 MON2Q7Z3U7 1717 aa24.23■■□□□ 1.47
ITSN1-230ENST00000488166 PEAK1Q9H792 1746 aa24.23■■□□□ 1.47
ITSN1-230ENST00000488166 WDR17Q8IZU2 1322 aa24.22■■□□□ 1.47
ITSN1-230ENST00000488166 AXIN2Q9Y2T1 843 aa24.22■■□□□ 1.47
ITSN1-230ENST00000488166 CSB-PGBD3P0DP91 1061 aa24.21■■□□□ 1.47
ITSN1-230ENST00000488166 ARHGEF25Q86VW2 580 aa24.2■■□□□ 1.46
ITSN1-230ENST00000488166 CARD11Q9BXL7 1154 aa24.18■■□□□ 1.46
ITSN1-230ENST00000488166 RGPD3A6NKT7 1758 aaPredicted RBP24.18■■□□□ 1.46
ITSN1-230ENST00000488166 RGPD4Q7Z3J3 1758 aa24.18■■□□□ 1.46
ITSN1-230ENST00000488166 LTN1O94822 1766 aa24.16■■□□□ 1.46
ITSN1-230ENST00000488166 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.16■■□□□ 1.46
ITSN1-230ENST00000488166 NFAT5O94916 1531 aa24.15■■□□□ 1.46
ITSN1-230ENST00000488166 TMC1Q8TDI8 760 aa24.15■■□□□ 1.46
ITSN1-230ENST00000488166 CDCA7Q9BWT1 371 aaPredicted RBP24.15■■□□□ 1.46
ITSN1-230ENST00000488166 CARD10Q9BWT7 1032 aa24.13■■□□□ 1.45
ITSN1-230ENST00000488166 SBNO2Q9Y2G9 1366 aa24.13■■□□□ 1.45
ITSN1-230ENST00000488166 TONSLQ96HA7 1378 aa24.12■■□□□ 1.45
ITSN1-230ENST00000488166 MARCH10Q8NA82 808 aaPredicted RBP24.11■■□□□ 1.45
ITSN1-230ENST00000488166 BCL11BQ9C0K0 894 aaPredicted RBP24.11■■□□□ 1.45
ITSN1-230ENST00000488166 USP54Q70EL1 1684 aa24.11■■□□□ 1.45
ITSN1-230ENST00000488166 EXOC5O00471 708 aa24.1■■□□□ 1.45
ITSN1-230ENST00000488166 PLSCR1O15162 318 aa24.1■■□□□ 1.45
ITSN1-230ENST00000488166 HDGFL2Q7Z4V5 671 aaPredicted RBP24.1■■□□□ 1.45
ITSN1-230ENST00000488166 ABCC6O95255 1503 aa24.1■■□□□ 1.45
ITSN1-230ENST00000488166 CCDC7Q96M83 1385 aa24.09■■□□□ 1.45
ITSN1-230ENST00000488166 PPP1R1BQ9UD71 204 aaPredicted RBP24.09■■□□□ 1.45
ITSN1-230ENST00000488166 PTF1AQ7RTS3 328 aa24.08■■□□□ 1.45
ITSN1-230ENST00000488166 NME9Q86XW9 330 aa24.08■■□□□ 1.45
ITSN1-230ENST00000488166 KAT6BQ8WYB5 2073 aa24.07■■□□□ 1.44
ITSN1-230ENST00000488166 CD163L1Q9NR16 1453 aa24.07■■□□□ 1.44
ITSN1-230ENST00000488166 SPON1Q9HCB6 807 aa24.07■■□□□ 1.44
ITSN1-230ENST00000488166 USP31Q70CQ4 1352 aa24.06■■□□□ 1.44
ITSN1-230ENST00000488166 SLC12A5Q9H2X9 1139 aa24.06■■□□□ 1.44
ITSN1-230ENST00000488166 KCNQ2O43526 872 aa24.05■■□□□ 1.44
ITSN1-230ENST00000488166 NLRP2Q9NX02 1062 aa24.04■■□□□ 1.44
ITSN1-230ENST00000488166 TERF2IPQ9NYB0 399 aa24.04■■□□□ 1.44
ITSN1-230ENST00000488166 BCL9O00512 1426 aa24.03■■□□□ 1.44
ITSN1-230ENST00000488166 TNS2Q63HR2 1409 aa24.03■■□□□ 1.44
ITSN1-230ENST00000488166 EDC4Q6P2E9 1401 aaKnown RBP24.02■■□□□ 1.44
ITSN1-230ENST00000488166 ANO8Q9HCE9 1232 aaPredicted RBP24.02■■□□□ 1.44
ITSN1-230ENST00000488166 ERBB3P21860 1342 aa24.02■■□□□ 1.44
ITSN1-230ENST00000488166 NHSQ6T4R5 1651 aa24.01■■□□□ 1.43
ITSN1-230ENST00000488166 CASZ1Q86V15 1759 aa24.01■■□□□ 1.43
ITSN1-230ENST00000488166 A0A1W2PP64 1363 aa24■■□□□ 1.43
ITSN1-230ENST00000488166 ANKRD24Q8TF21 1146 aa23.99■■□□□ 1.43
ITSN1-230ENST00000488166 IL2RBP14784 551 aa23.98■■□□□ 1.43
ITSN1-230ENST00000488166 TXNRD1Q16881 649 aa23.98■■□□□ 1.43
ITSN1-230ENST00000488166 PROM2Q8N271 834 aa23.98■■□□□ 1.43
ITSN1-230ENST00000488166 ACSBG1Q96GR2 724 aa23.97■■□□□ 1.43
ITSN1-230ENST00000488166 FAM208AQ9UK61 1670 aaKnown RBP23.96■■□□□ 1.43
ITSN1-230ENST00000488166 STK32BQ9NY57 414 aa23.96■■□□□ 1.43
ITSN1-230ENST00000488166 BTAF1O14981 1849 aa23.96■■□□□ 1.43
ITSN1-230ENST00000488166 DCAF8L1A6NGE4 600 aa23.95■■□□□ 1.42
ITSN1-230ENST00000488166 PUS7Q96PZ0 661 aaKnown RBP23.95■■□□□ 1.42
ITSN1-230ENST00000488166 ST20-MTHFSA0A0A6YYL1 179 aa23.93■■□□□ 1.42
ITSN1-230ENST00000488166 LTV1Q96GA3 475 aaPredicted RBP23.93■■□□□ 1.42
ITSN1-230ENST00000488166 PDGFDQ9GZP0 370 aaPredicted RBP23.93■■□□□ 1.42
ITSN1-230ENST00000488166 NINLQ9Y2I6 1382 aa23.92■■□□□ 1.42
ITSN1-230ENST00000488166 ZBTB7AO95365 584 aa23.92■■□□□ 1.42
ITSN1-230ENST00000488166 SLC15A2Q16348 729 aa23.91■■□□□ 1.42
ITSN1-230ENST00000488166 COG3Q96JB2 828 aa23.91■■□□□ 1.42
ITSN1-230ENST00000488166 RGPD2P0DJD1 1756 aa23.91■■□□□ 1.42
ITSN1-230ENST00000488166 MYOM1P52179 1685 aa23.9■■□□□ 1.42
ITSN1-230ENST00000488166 IP6K1Q92551 441 aa23.9■■□□□ 1.42
ITSN1-230ENST00000488166 TESK2Q96S53 571 aa23.9■■□□□ 1.42
ITSN1-230ENST00000488166 SLC24A1O60721 1099 aa23.89■■□□□ 1.41
ITSN1-230ENST00000488166 YY1P25490 414 aa23.89■■□□□ 1.41
ITSN1-230ENST00000488166 ATF5Q9Y2D1 282 aaPredicted RBP23.89■■□□□ 1.41
ITSN1-230ENST00000488166 AMPHP49418 695 aa23.86■■□□□ 1.41
ITSN1-230ENST00000488166 DDX54Q8TDD1 881 aaKnown RBP23.86■■□□□ 1.41
ITSN1-230ENST00000488166 MAP3K19Q56UN5 1328 aa23.84■■□□□ 1.41
ITSN1-230ENST00000488166 ANKRD36BQ8N2N9 1353 aa23.83■■□□□ 1.41
ITSN1-230ENST00000488166 FBLN1P23142 703 aa23.83■■□□□ 1.41
ITSN1-230ENST00000488166 DOT1LQ8TEK3 1739 aa23.82■■□□□ 1.4
ITSN1-230ENST00000488166 PAPPAQ13219 1627 aa23.82■■□□□ 1.4
ITSN1-230ENST00000488166 HOXC9P31274 260 aa23.82■■□□□ 1.4
ITSN1-230ENST00000488166 TMF1P82094 1093 aa23.82■■□□□ 1.4
ITSN1-230ENST00000488166 KIF20BQ96Q89 1820 aa23.82■■□□□ 1.4
ITSN1-230ENST00000488166 PTGER2P43116 358 aa23.81■■□□□ 1.4
ITSN1-230ENST00000488166 MTFR1LQ9H019 292 aa23.81■■□□□ 1.4
ITSN1-230ENST00000488166 SYTL4Q96C24 671 aaPredicted RBP23.8■■□□□ 1.4
ITSN1-230ENST00000488166 SHANK3Q9BYB0 1731 aa23.79■■□□□ 1.4
ITSN1-230ENST00000488166 TRIM26Q12899 539 aaPredicted RBP23.79■■□□□ 1.4
ITSN1-230ENST00000488166 USP47Q96K76 1375 aa23.78■■□□□ 1.4
ITSN1-230ENST00000488166 GGNBP2Q9H3C7 697 aa23.77■■□□□ 1.4
ITSN1-230ENST00000488166 RRS1Q15050 365 aaKnown RBP23.76■■□□□ 1.39
ITSN1-230ENST00000488166 FHDC1Q9C0D6 1143 aaPredicted RBP23.76■■□□□ 1.39
ITSN1-230ENST00000488166 LRRC4BQ9NT99 713 aa23.76■■□□□ 1.39
ITSN1-230ENST00000488166 QSER1Q2KHR3 1735 aa23.76■■□□□ 1.39
ITSN1-230ENST00000488166 ZNF827Q17R98 1081 aa23.75■■□□□ 1.39
ITSN1-230ENST00000488166 ZCRB1Q8TBF4 217 aaKnown RBP23.75■■□□□ 1.39
ITSN1-230ENST00000488166 RTL1A6NKG5 1358 aa23.75■■□□□ 1.39
ITSN1-230ENST00000488166 FYB1O15117 783 aa23.74■■□□□ 1.39
ITSN1-230ENST00000488166 PRIM1P49642 420 aaKnown RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms