RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 AMHR2Q16671 573 aa6.76□□□□□ -1.33
HFM1-208ENST00000488023 CCDC155Q8N6L0 562 aa6.76□□□□□ -1.33
HFM1-208ENST00000488023 FOXJ1Q92949 421 aa6.76□□□□□ -1.33
HFM1-208ENST00000488023 GJA5P36382 358 aa6.75□□□□□ -1.33
HFM1-208ENST00000488023 GIGYF2Q6Y7W6 1299 aaKnown RBP6.75□□□□□ -1.33
HFM1-208ENST00000488023 VWA5B2Q8N398 1253 aa6.75□□□□□ -1.33
HFM1-208ENST00000488023 AK7Q96M32 723 aa6.75□□□□□ -1.33
HFM1-208ENST00000488023 BEGAINQ9BUH8 593 aa6.75□□□□□ -1.33
HFM1-208ENST00000488023 KRTAP4-7Q9BYR0 210 aa6.75□□□□□ -1.33
HFM1-208ENST00000488023 NR5A1Q13285 461 aa6.74□□□□□ -1.33
HFM1-208ENST00000488023 RSBN1LQ6PCB5 846 aaPredicted RBP6.74□□□□□ -1.33
HFM1-208ENST00000488023 TBC1D2Q9BYX2 928 aa6.74□□□□□ -1.33
HFM1-208ENST00000488023 SLC24A3Q9HC58 644 aa6.74□□□□□ -1.33
HFM1-208ENST00000488023 PCDHB15Q9Y5E8 787 aa6.74□□□□□ -1.33
HFM1-208ENST00000488023 CFAP99D6REC4 459 aa6.74□□□□□ -1.33
HFM1-208ENST00000488023 ADAMTS2O95450 1211 aa6.74□□□□□ -1.33
HFM1-208ENST00000488023 F12P00748 615 aaPredicted RBP6.74□□□□□ -1.33
HFM1-208ENST00000488023 ARID5BQ14865 1188 aa6.74□□□□□ -1.33
HFM1-208ENST00000488023 GALNT6Q8NCL4 622 aa6.74□□□□□ -1.33
HFM1-208ENST00000488023 TTLL8A6PVC2 850 aa6.73□□□□□ -1.33
HFM1-208ENST00000488023 SPTLC1O15269 473 aa6.73□□□□□ -1.33
HFM1-208ENST00000488023 MAP10Q9P2G4 905 aa6.73□□□□□ -1.33
HFM1-208ENST00000488023 CNTNAP5Q8WYK1 1306 aa6.72□□□□□ -1.33
HFM1-208ENST00000488023 SLC35F4A4IF30 521 aa6.72□□□□□ -1.33
HFM1-208ENST00000488023 FIGNL2A6NMB9 653 aa6.72□□□□□ -1.33
HFM1-208ENST00000488023 PHF20L1A8MW92 1017 aa6.72□□□□□ -1.33
HFM1-208ENST00000488023 TRIM66O15016 1216 aa6.72□□□□□ -1.33
HFM1-208ENST00000488023 CELA2BP08218 269 aaPredicted RBP6.72□□□□□ -1.33
HFM1-208ENST00000488023 GRM5P41594 1212 aa6.72□□□□□ -1.33
HFM1-208ENST00000488023 MAP3K10Q02779 954 aa6.72□□□□□ -1.33
HFM1-208ENST00000488023 SV2AQ7L0J3 742 aa6.72□□□□□ -1.33
HFM1-208ENST00000488023 ITGA6P23229 1130 aa6.71□□□□□ -1.33
HFM1-208ENST00000488023 HRCP23327 699 aa6.71□□□□□ -1.33
HFM1-208ENST00000488023 DIXDC1Q155Q3 683 aa6.71□□□□□ -1.33
HFM1-208ENST00000488023 C4orf48Q5BLP8 95 aa6.71□□□□□ -1.33
HFM1-208ENST00000488023 TSEN34Q9BSV6 310 aaKnown RBP6.71□□□□□ -1.33
HFM1-208ENST00000488023 KRTAP17-1Q9BYP8 105 aa6.71□□□□□ -1.34
HFM1-208ENST00000488023 ZBTB3Q9H5J0 574 aa6.71□□□□□ -1.34
HFM1-208ENST00000488023 CDC14CA4D256 554 aa6.7□□□□□ -1.34
HFM1-208ENST00000488023 AGERQ15109 404 aa6.7□□□□□ -1.34
HFM1-208ENST00000488023 BAG6P46379 1132 aa6.69□□□□□ -1.34
HFM1-208ENST00000488023 SRSF11Q05519 484 aaKnown RBP6.69□□□□□ -1.34
HFM1-208ENST00000488023 PRPF38BQ5VTL8 546 aaKnown RBP6.69□□□□□ -1.34
HFM1-208ENST00000488023 BPHLQ86WA6 291 aaPredicted RBP6.69□□□□□ -1.34
HFM1-208ENST00000488023 CABLES1Q8TDN4 633 aa6.69□□□□□ -1.34
HFM1-208ENST00000488023 PER1O15534 1290 aaPredicted RBP6.68□□□□□ -1.34
HFM1-208ENST00000488023 BRPF1P55201 1214 aaPredicted RBP6.68□□□□□ -1.34
HFM1-208ENST00000488023 RIC3Q7Z5B4 369 aa6.68□□□□□ -1.34
HFM1-208ENST00000488023 SUPT5HO00267 1087 aaKnown RBP6.68□□□□□ -1.34
HFM1-208ENST00000488023 PARP9Q8IXQ6 854 aa6.68□□□□□ -1.34
HFM1-208ENST00000488023 BEND7Q8N7W2 519 aaPredicted RBP6.68□□□□□ -1.34
HFM1-208ENST00000488023 ENAMQ9NRM1 1142 aa6.68□□□□□ -1.34
HFM1-208ENST00000488023 SH3RF1Q7Z6J0 888 aa6.67□□□□□ -1.34
HFM1-208ENST00000488023 C1QTNF2Q9BXJ5 285 aa6.67□□□□□ -1.34
HFM1-208ENST00000488023 PDE4DQ08499 809 aa6.66□□□□□ -1.34
HFM1-208ENST00000488023 CSPP1Q1MSJ5 1256 aa6.66□□□□□ -1.34
HFM1-208ENST00000488023 FURINP09958 794 aa6.65□□□□□ -1.34
HFM1-208ENST00000488023 ARMC2Q8NEN0 867 aa6.65□□□□□ -1.34
HFM1-208ENST00000488023 FSHRP23945 695 aa6.65□□□□□ -1.35
HFM1-208ENST00000488023 GAS6Q14393 721 aa6.65□□□□□ -1.35
HFM1-208ENST00000488023 MAP4K5Q9Y4K4 846 aa6.65□□□□□ -1.35
HFM1-208ENST00000488023 VASH1Q7L8A9 365 aaPredicted RBP6.64□□□□□ -1.35
HFM1-208ENST00000488023 TSC1Q92574 1164 aa6.64□□□□□ -1.35
HFM1-208ENST00000488023 SPINT1O43278 529 aa6.63□□□□□ -1.35
HFM1-208ENST00000488023 TRMT44Q8IYL2 757 aaKnown RBP6.63□□□□□ -1.35
HFM1-208ENST00000488023 LIMD1Q9UGP4 676 aa6.63□□□□□ -1.35
HFM1-208ENST00000488023 NUTM2BA6NNL0 878 aaPredicted RBP6.62□□□□□ -1.35
HFM1-208ENST00000488023 NUTM2EB1AL46 878 aaPredicted RBP6.62□□□□□ -1.35
HFM1-208ENST00000488023 QPCTQ16769 361 aa6.62□□□□□ -1.35
HFM1-208ENST00000488023 NBPF14Q5TI25 921 aa6.62□□□□□ -1.35
HFM1-208ENST00000488023 NUTM2DQ5VT03 806 aaPredicted RBP6.62□□□□□ -1.35
HFM1-208ENST00000488023 SH3BP5LQ7L8J4 393 aa6.62□□□□□ -1.35
HFM1-208ENST00000488023 PODNQ7Z5L7 613 aa6.62□□□□□ -1.35
HFM1-208ENST00000488023 NUTM2AQ8IVF1 878 aaPredicted RBP6.62□□□□□ -1.35
HFM1-208ENST00000488023 EMILIN1Q9Y6C2 1016 aa6.62□□□□□ -1.35
HFM1-208ENST00000488023 LILRB3O75022 631 aa6.61□□□□□ -1.35
HFM1-208ENST00000488023 TUSC1Q2TAM9 212 aa6.61□□□□□ -1.35
HFM1-208ENST00000488023 CCDC116Q8IYX3 515 aa6.61□□□□□ -1.35
HFM1-208ENST00000488023 MAGEB6P1A0A0J9YX57 407 aa6.61□□□□□ -1.35
HFM1-208ENST00000488023 KRBA1A5PL33 1030 aa6.61□□□□□ -1.35
HFM1-208ENST00000488023 MYSM1Q5VVJ2 828 aa6.61□□□□□ -1.35
HFM1-208ENST00000488023 SENP3-EIF4A1A0A087X0R7 540 aa6.6□□□□□ -1.35
HFM1-208ENST00000488023 PODXL2Q9NZ53 605 aa6.6□□□□□ -1.35
HFM1-208ENST00000488023 CBLBQ13191 982 aa6.59□□□□□ -1.35
HFM1-208ENST00000488023 RTL5Q5HYW3 569 aaPredicted RBP6.59□□□□□ -1.35
HFM1-208ENST00000488023 Q6ZVU0 165 aa6.59□□□□□ -1.35
HFM1-208ENST00000488023 NEDD1Q8NHV4 660 aa6.59□□□□□ -1.35
HFM1-208ENST00000488023 GPBP1L1Q9HC44 474 aaPredicted RBP6.59□□□□□ -1.35
HFM1-208ENST00000488023 BCRP11274 1271 aa6.58□□□□□ -1.36
HFM1-208ENST00000488023 CARD14Q9BXL6 1004 aa6.58□□□□□ -1.36
HFM1-208ENST00000488023 CTSOP43234 321 aaPredicted RBP6.58□□□□□ -1.36
HFM1-208ENST00000488023 NEUROD2Q15784 382 aa6.58□□□□□ -1.36
HFM1-208ENST00000488023 ERFEQ4G0M1 354 aa6.58□□□□□ -1.36
HFM1-208ENST00000488023 PPP1R26Q5T8A7 1209 aaPredicted RBP6.58□□□□□ -1.36
HFM1-208ENST00000488023 HELBQ8NG08 1087 aaPredicted RBP6.58□□□□□ -1.36
HFM1-208ENST00000488023 GPKOWQ92917 476 aaPredicted RBP eCLIP6.58□□□□□ -1.361e-17■■■■■ 88.5
HFM1-208ENST00000488023 CUEDC1Q9NWM3 386 aaPredicted RBP6.58□□□□□ -1.36
HFM1-208ENST00000488023 PGPEP1Q9NXJ5 209 aa6.58□□□□□ -1.36
HFM1-208ENST00000488023 KDM4CQ9H3R0 1056 aa6.57□□□□□ -1.36
HFM1-208ENST00000488023 RSPH6AQ9H0K4 717 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms