RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 KCTD15Q96SI1 283 aaPredicted RBP8.33□□□□□ -1.08
TTC3-220ENST00000487711 FSHRP23945 695 aa8.32□□□□□ -1.08
TTC3-220ENST00000487711 GRM5P41594 1212 aa8.32□□□□□ -1.08
TTC3-220ENST00000487711 SEMA3FQ13275 785 aa8.32□□□□□ -1.08
TTC3-220ENST00000487711 PKDCCQ504Y2 493 aa8.32□□□□□ -1.08
TTC3-220ENST00000487711 ERICH6Q7L0X2 663 aa8.32□□□□□ -1.08
TTC3-220ENST00000487711 POM121CA8CG34 1229 aa8.31□□□□□ -1.08
TTC3-220ENST00000487711 TRAK2O60296 914 aa8.31□□□□□ -1.08
TTC3-220ENST00000487711 SOX11P35716 441 aa8.31□□□□□ -1.08
TTC3-220ENST00000487711 RAB15P59190 212 aa8.31□□□□□ -1.08
TTC3-220ENST00000487711 NR5A1Q13285 461 aa8.31□□□□□ -1.08
TTC3-220ENST00000487711 NNTQ13423 1086 aa8.3□□□□□ -1.08
TTC3-220ENST00000487711 DGAT1O75907 488 aa8.29□□□□□ -1.08
TTC3-220ENST00000487711 HPS1Q92902 700 aa8.29□□□□□ -1.08
TTC3-220ENST00000487711 GIGYF1O75420 1035 aaPredicted RBP8.28□□□□□ -1.08
TTC3-220ENST00000487711 NR3C2P08235 984 aa8.28□□□□□ -1.08
TTC3-220ENST00000487711 INTS6LQ5JSJ4 861 aaKnown RBP8.28□□□□□ -1.08
TTC3-220ENST00000487711 CCDC116Q8IYX3 515 aa8.28□□□□□ -1.08
TTC3-220ENST00000487711 CEP126Q9P2H0 1117 aa8.28□□□□□ -1.08
TTC3-220ENST00000487711 ESPNB1AK53 854 aa8.27□□□□□ -1.09
TTC3-220ENST00000487711 HDGFL1Q5TGJ6 251 aa8.27□□□□□ -1.09
TTC3-220ENST00000487711 RNF20Q5VTR2 975 aa8.27□□□□□ -1.09
TTC3-220ENST00000487711 SEPT12Q8IYM1 358 aa8.27□□□□□ -1.09
TTC3-220ENST00000487711 ALG2Q9H553 416 aa8.27□□□□□ -1.09
TTC3-220ENST00000487711 ZNF777Q9ULD5 760 aaPredicted RBP8.27□□□□□ -1.09
TTC3-220ENST00000487711 DHX9Q08211 1270 aaKnown RBP8.26□□□□□ -1.09
TTC3-220ENST00000487711 SLFNL1Q499Z3 407 aa8.26□□□□□ -1.09
TTC3-220ENST00000487711 Q6ZNB5 142 aa8.26□□□□□ -1.09
TTC3-220ENST00000487711 GLMNQ92990 594 aa8.26□□□□□ -1.09
TTC3-220ENST00000487711 TIMELESSQ9UNS1 1208 aa8.26□□□□□ -1.09
TTC3-220ENST00000487711 WDR4P57081 412 aaKnown RBP8.25□□□□□ -1.09
TTC3-220ENST00000487711 PPP1R26Q5T8A7 1209 aaPredicted RBP8.25□□□□□ -1.09
TTC3-220ENST00000487711 EMILIN1Q9Y6C2 1016 aa8.25□□□□□ -1.09
TTC3-220ENST00000487711 ERVH48-1M5A8F1 160 aa8.24□□□□□ -1.09
TTC3-220ENST00000487711 RNF135Q8IUD6 432 aa8.24□□□□□ -1.09
TTC3-220ENST00000487711 ADAMTS19Q8TE59 1207 aa8.24□□□□□ -1.09
TTC3-220ENST00000487711 CALR3Q96L12 384 aaKnown RBP8.24□□□□□ -1.09
TTC3-220ENST00000487711 PGPEP1Q9NXJ5 209 aa8.24□□□□□ -1.09
TTC3-220ENST00000487711 ZIC2O95409 532 aaPredicted RBP8.23□□□□□ -1.09
TTC3-220ENST00000487711 AVPP01185 164 aa8.23□□□□□ -1.09
TTC3-220ENST00000487711 ITPKCQ96DU7 683 aa8.23□□□□□ -1.09
TTC3-220ENST00000487711 CAPN5O15484 640 aaPredicted RBP8.22□□□□□ -1.09
TTC3-220ENST00000487711 TIMP2P16035 220 aa8.22□□□□□ -1.09
TTC3-220ENST00000487711 MYT1Q01538 1121 aa8.22□□□□□ -1.09
TTC3-220ENST00000487711 CCDC125Q86Z20 511 aa8.22□□□□□ -1.09
TTC3-220ENST00000487711 ZFAND3Q9H8U3 227 aa8.22□□□□□ -1.09
TTC3-220ENST00000487711 TMPRSS4Q9NRS4 437 aa8.22□□□□□ -1.09
TTC3-220ENST00000487711 PCDHB11Q9Y5F2 797 aa8.22□□□□□ -1.09
TTC3-220ENST00000487711 AXIN1O15169 862 aa8.21□□□□□ -1.1
TTC3-220ENST00000487711 CTC1Q2NKJ3 1217 aa8.21□□□□□ -1.1
TTC3-220ENST00000487711 TRIM52Q96A61 297 aa8.21□□□□□ -1.1
TTC3-220ENST00000487711 KLF16Q9BXK1 252 aaPredicted RBP8.21□□□□□ -1.1
TTC3-220ENST00000487711 PIK3CDO00329 1044 aa8.2□□□□□ -1.1
TTC3-220ENST00000487711 ST8SIA5O15466 376 aa8.2□□□□□ -1.1
TTC3-220ENST00000487711 PHTF2Q8N3S3 785 aa8.2□□□□□ -1.1
TTC3-220ENST00000487711 ZNF784Q8NCA9 323 aaPredicted RBP8.2□□□□□ -1.1
TTC3-220ENST00000487711 CCDC85AQ96PX6 553 aaPredicted RBP8.2□□□□□ -1.1
TTC3-220ENST00000487711 ESF1Q9H501 851 aaKnown RBP8.2□□□□□ -1.1
TTC3-220ENST00000487711 CYLDQ9NQC7 956 aa8.2□□□□□ -1.1
TTC3-220ENST00000487711 DOLKQ9UPQ8 538 aa8.2□□□□□ -1.1
TTC3-220ENST00000487711 ARID3CA6NKF2 412 aa8.19□□□□□ -1.1
TTC3-220ENST00000487711 SKIP12755 728 aa8.19□□□□□ -1.1
TTC3-220ENST00000487711 SMCPP49901 116 aaPredicted RBP8.18□□□□□ -1.1
TTC3-220ENST00000487711 TSGA10IPQ3SY00 556 aa8.18□□□□□ -1.1
TTC3-220ENST00000487711 CRIPAKQ8N1N5 446 aa8.18□□□□□ -1.1
TTC3-220ENST00000487711 PLPP7Q8NBV4 271 aa8.18□□□□□ -1.1
TTC3-220ENST00000487711 NFATC2IPQ8NCF5 419 aa8.18□□□□□ -1.1
TTC3-220ENST00000487711 UCN2Q96RP3 112 aa8.18□□□□□ -1.1
TTC3-220ENST00000487711 AAASQ9NRG9 546 aa8.18□□□□□ -1.1
TTC3-220ENST00000487711 CBLBQ13191 982 aa8.17□□□□□ -1.1
TTC3-220ENST00000487711 MAP7D1Q3KQU3 841 aa8.17□□□□□ -1.1
TTC3-220ENST00000487711 OXLD1Q5BKU9 147 aa8.17□□□□□ -1.1
TTC3-220ENST00000487711 TRAF7Q6Q0C0 670 aa8.17□□□□□ -1.1
TTC3-220ENST00000487711 CDCA7Q9BWT1 371 aaPredicted RBP8.17□□□□□ -1.1
TTC3-220ENST00000487711 MYCP01106 439 aaPredicted RBP8.16□□□□□ -1.1
TTC3-220ENST00000487711 CC2D2BQ6DHV5 1058 aa8.16□□□□□ -1.1
TTC3-220ENST00000487711 TBC1D9Q6ZT07 1266 aa8.16□□□□□ -1.1
TTC3-220ENST00000487711 CHIC2Q9UKJ5 165 aa8.16□□□□□ -1.1
TTC3-220ENST00000487711 ATP9BO43861 1147 aa8.15□□□□□ -1.1
TTC3-220ENST00000487711 LILRA1O75019 489 aa8.15□□□□□ -1.1
TTC3-220ENST00000487711 SCTRP47872 440 aa8.15□□□□□ -1.1
TTC3-220ENST00000487711 ERVK-9P63128 1117 aa8.15□□□□□ -1.1
TTC3-220ENST00000487711 MEIOBQ8N635 442 aa8.15□□□□□ -1.1
TTC3-220ENST00000487711 USP17L5A8MUK1 530 aa8.14□□□□□ -1.11
TTC3-220ENST00000487711 UPP2O95045 317 aa8.14□□□□□ -1.11
TTC3-220ENST00000487711 BMP1P13497 986 aa8.14□□□□□ -1.11
TTC3-220ENST00000487711 ADD1P35611 737 aaKnown RBP8.14□□□□□ -1.11
TTC3-220ENST00000487711 USP4Q13107 963 aa8.14□□□□□ -1.11
TTC3-220ENST00000487711 Q6ZVU0 165 aa8.14□□□□□ -1.11
TTC3-220ENST00000487711 DEPDC4Q8N2C3 294 aa8.14□□□□□ -1.11
TTC3-220ENST00000487711 SIRT1Q96EB6 747 aa8.14□□□□□ -1.11
TTC3-220ENST00000487711 TFIP11Q9UBB9 837 aaKnown RBP8.14□□□□□ -1.11
TTC3-220ENST00000487711 PALM3A6NDB9 673 aaPredicted RBP8.13□□□□□ -1.11
TTC3-220ENST00000487711 SUPT5HO00267 1087 aaKnown RBP8.13□□□□□ -1.11
TTC3-220ENST00000487711 LCE2BO14633 110 aa8.13□□□□□ -1.11
TTC3-220ENST00000487711 SCARF1Q14162 830 aa8.13□□□□□ -1.11
TTC3-220ENST00000487711 EML3Q32P44 896 aa8.13□□□□□ -1.11
TTC3-220ENST00000487711 CCDC97Q96F63 343 aaPredicted RBP8.13□□□□□ -1.11
TTC3-220ENST00000487711 AGBL1Q96MI9 1066 aa8.13□□□□□ -1.11
TTC3-220ENST00000487711 PPP1R12CQ9BZL4 782 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms