RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 ANKARQ7Z5J8 1434 aa12.64□□□□□ -0.39
XRN1-212ENST00000486211 SGIP1Q9BQI5 828 aa12.64□□□□□ -0.39
XRN1-212ENST00000486211 CCDC61Q9Y6R9 512 aa12.64□□□□□ -0.39
XRN1-212ENST00000486211 PEAK1Q9H792 1746 aa12.64□□□□□ -0.39
XRN1-212ENST00000486211 KIAA0232Q92628 1395 aa12.64□□□□□ -0.39
XRN1-212ENST00000486211 DLC1Q96QB1 1528 aa12.63□□□□□ -0.39
XRN1-212ENST00000486211 PELP1Q8IZL8 1130 aaKnown RBP12.63□□□□□ -0.39
XRN1-212ENST00000486211 STRN4Q9NRL3 753 aa12.63□□□□□ -0.39
XRN1-212ENST00000486211 ACIN1Q9UKV3 1341 aaKnown RBP12.62□□□□□ -0.39
XRN1-212ENST00000486211 PIK3C2GO75747 1445 aa12.62□□□□□ -0.39
XRN1-212ENST00000486211 SSH2Q76I76 1423 aa12.62□□□□□ -0.39
XRN1-212ENST00000486211 SHANK3Q9BYB0 1731 aa12.62□□□□□ -0.39
XRN1-212ENST00000486211 PLSCR1O15162 318 aa12.62□□□□□ -0.39
XRN1-212ENST00000486211 CHRNA2Q15822 529 aa12.62□□□□□ -0.39
XRN1-212ENST00000486211 USP35Q9P2H5 1018 aa12.62□□□□□ -0.39
XRN1-212ENST00000486211 ASTLQ6HA08 431 aaPredicted RBP12.61□□□□□ -0.39
XRN1-212ENST00000486211 PLCD3Q8N3E9 789 aa12.61□□□□□ -0.39
XRN1-212ENST00000486211 PARP4Q9UKK3 1724 aaKnown RBP12.61□□□□□ -0.39
XRN1-212ENST00000486211 GPRASP1Q5JY77 1395 aa12.6□□□□□ -0.39
XRN1-212ENST00000486211 MAP3K5Q99683 1374 aa12.6□□□□□ -0.39
XRN1-212ENST00000486211 PHRF1Q9P1Y6 1649 aaKnown RBP12.6□□□□□ -0.39
XRN1-212ENST00000486211 SBF2Q86WG5 1849 aa12.6□□□□□ -0.39
XRN1-212ENST00000486211 ITGAEP38570 1179 aa12.59□□□□□ -0.39
XRN1-212ENST00000486211 PTF1AQ7RTS3 328 aa12.59□□□□□ -0.39
XRN1-212ENST00000486211 SPATA31E1Q6ZUB1 1445 aa12.59□□□□□ -0.39
XRN1-212ENST00000486211 PRR36Q9H6K5 1346 aa12.59□□□□□ -0.39
XRN1-212ENST00000486211 ANKRD30BQ9BXX2 1392 aa12.58□□□□□ -0.4
XRN1-212ENST00000486211 OVOS2A0A0G2JMS6 1433 aa12.58□□□□□ -0.4
XRN1-212ENST00000486211 OVOS2A0A0J9YW53 1432 aa12.58□□□□□ -0.4
XRN1-212ENST00000486211 ATMINO43313 823 aaPredicted RBP12.58□□□□□ -0.4
XRN1-212ENST00000486211 OVOS2Q6IE36 1432 aa12.58□□□□□ -0.4
XRN1-212ENST00000486211 LARP1Q6PKG0 1096 aaKnown RBP12.58□□□□□ -0.4
XRN1-212ENST00000486211 TCP11L2Q8N4U5 519 aa12.58□□□□□ -0.4
XRN1-212ENST00000486211 KIF12Q96FN5 646 aa12.58□□□□□ -0.4
XRN1-212ENST00000486211 LMO7Q8WWI1 1683 aa12.57□□□□□ -0.4
XRN1-212ENST00000486211 C11orf95C9JLR9 678 aaPredicted RBP12.57□□□□□ -0.4
XRN1-212ENST00000486211 POTEB2H3BUK9 544 aa12.57□□□□□ -0.4
XRN1-212ENST00000486211 PRAM1Q96QH2 718 aa12.57□□□□□ -0.4
XRN1-212ENST00000486211 MTFR1LQ9H019 292 aa12.57□□□□□ -0.4
XRN1-212ENST00000486211 DHX57Q6P158 1386 aaKnown RBP12.56□□□□□ -0.4
XRN1-212ENST00000486211 SAFB2Q14151 953 aaKnown RBP eCLIP12.56□□□□□ -0.4
XRN1-212ENST00000486211 RASEFQ8IZ41 740 aa12.56□□□□□ -0.4
XRN1-212ENST00000486211 OTUD5Q96G74 571 aa12.56□□□□□ -0.4
XRN1-212ENST00000486211 BCL11BQ9C0K0 894 aaPredicted RBP12.56□□□□□ -0.4
XRN1-212ENST00000486211 ATP7BP35670 1465 aa12.55□□□□□ -0.4
XRN1-212ENST00000486211 ZC3H6P61129 1189 aaKnown RBP12.55□□□□□ -0.4
XRN1-212ENST00000486211 SLC39A7Q92504 469 aa12.55□□□□□ -0.4
XRN1-212ENST00000486211 THRAP3Q9Y2W1 955 aaKnown RBP12.55□□□□□ -0.4
XRN1-212ENST00000486211 LRRC37A3O60309 1634 aa12.55□□□□□ -0.4
XRN1-212ENST00000486211 TULP4Q9NRJ4 1543 aa12.54□□□□□ -0.4
XRN1-212ENST00000486211 C7P10643 843 aa12.54□□□□□ -0.4
XRN1-212ENST00000486211 EVA1CP58658 441 aa12.54□□□□□ -0.4
XRN1-212ENST00000486211 SLC15A2Q16348 729 aa12.54□□□□□ -0.4
XRN1-212ENST00000486211 ARXQ96QS3 562 aa12.54□□□□□ -0.4
XRN1-212ENST00000486211 C14orf93Q9H972 538 aaKnown RBP12.54□□□□□ -0.4
XRN1-212ENST00000486211 METRNQ9UJH8 293 aa12.54□□□□□ -0.4
XRN1-212ENST00000486211 GPR162Q16538 588 aa12.53□□□□□ -0.4
XRN1-212ENST00000486211 RGL3Q3MIN7 710 aa12.53□□□□□ -0.4
XRN1-212ENST00000486211 STK32BQ9NY57 414 aa12.53□□□□□ -0.4
XRN1-212ENST00000486211 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
XRN1-212ENST00000486211 CPDO75976 1380 aa12.52□□□□□ -0.41
XRN1-212ENST00000486211 BCL9O00512 1426 aa12.52□□□□□ -0.41
XRN1-212ENST00000486211 HSPA6P17066 643 aa12.51□□□□□ -0.41
XRN1-212ENST00000486211 TXNRD1Q16881 649 aa12.51□□□□□ -0.41
XRN1-212ENST00000486211 COL5A2P05997 1499 aaPredicted RBP12.51□□□□□ -0.41
XRN1-212ENST00000486211 MAP3K13O43283 966 aa12.5□□□□□ -0.41
XRN1-212ENST00000486211 CFAP70Q5T0N1 1121 aa12.5□□□□□ -0.41
XRN1-212ENST00000486211 NGDNQ8NEJ9 315 aaKnown RBP12.5□□□□□ -0.41
XRN1-212ENST00000486211 HIRIP3Q9BW71 556 aaPredicted RBP12.5□□□□□ -0.41
XRN1-212ENST00000486211 EIF3AQ14152 1382 aaKnown RBP12.5□□□□□ -0.41
XRN1-212ENST00000486211 AATKQ6ZMQ8 1374 aa12.5□□□□□ -0.41
XRN1-212ENST00000486211 PAPPAQ13219 1627 aa12.49□□□□□ -0.41
XRN1-212ENST00000486211 NUTM2GQ5VZR2 741 aa12.49□□□□□ -0.41
XRN1-212ENST00000486211 CRB1P82279 1406 aa12.48□□□□□ -0.41
XRN1-212ENST00000486211 ATN1P54259 1190 aaPredicted RBP12.48□□□□□ -0.41
XRN1-212ENST00000486211 POGKQ9P215 609 aa12.48□□□□□ -0.41
XRN1-212ENST00000486211 GOLGB1Q14789 3259 aaKnown RBP12.47□□□□□ -0.41
XRN1-212ENST00000486211 ATP10DQ9P241 1426 aa12.47□□□□□ -0.41
XRN1-212ENST00000486211 USP19O94966 1318 aa12.47□□□□□ -0.41
XRN1-212ENST00000486211 WASLO00401 505 aaPredicted RBP12.47□□□□□ -0.41
XRN1-212ENST00000486211 MARCH10Q8NA82 808 aaPredicted RBP12.47□□□□□ -0.41
XRN1-212ENST00000486211 ADGRB1O14514 1584 aa12.47□□□□□ -0.41
XRN1-212ENST00000486211 COL24A1Q17RW2 1714 aa12.46□□□□□ -0.41
XRN1-212ENST00000486211 MINK1Q8N4C8 1332 aaPredicted RBP12.46□□□□□ -0.41
XRN1-212ENST00000486211 DDB1Q16531 1140 aa12.46□□□□□ -0.41
XRN1-212ENST00000486211 WNK3Q9BYP7 1800 aa12.46□□□□□ -0.42
XRN1-212ENST00000486211 FBXO3Q9UK99 471 aa12.45□□□□□ -0.42
XRN1-212ENST00000486211 ITSN1Q15811 1721 aa12.45□□□□□ -0.42
XRN1-212ENST00000486211 AKAP12Q02952 1782 aa12.44□□□□□ -0.42
XRN1-212ENST00000486211 YBX3P16989 372 aaKnown RBP eCLIP12.44□□□□□ -0.42
XRN1-212ENST00000486211 NLGN2Q8NFZ4 835 aa12.44□□□□□ -0.42
XRN1-212ENST00000486211 BMP2KQ9NSY1 1161 aaPredicted RBP12.44□□□□□ -0.42
XRN1-212ENST00000486211 TRPC6Q9Y210 931 aa12.44□□□□□ -0.42
XRN1-212ENST00000486211 POLR3AO14802 1390 aaPredicted RBP12.43□□□□□ -0.42
XRN1-212ENST00000486211 TIE1P35590 1138 aa12.43□□□□□ -0.42
XRN1-212ENST00000486211 NUBP1P53384 320 aa12.43□□□□□ -0.42
XRN1-212ENST00000486211 ADCY9O60503 1353 aa12.43□□□□□ -0.42
XRN1-212ENST00000486211 TOPAZ1Q8N9V7 1692 aa12.42□□□□□ -0.42
XRN1-212ENST00000486211 ZNF827Q17R98 1081 aa12.42□□□□□ -0.42
XRN1-212ENST00000486211 GCP02774 474 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms