RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 RBM6P78332 1123 aaKnown RBP15.2■□□□□ 0.02
SND1-212ENST00000485871 SRCAPQ6ZRS2 3230 aa15.19■□□□□ 0.02
SND1-212ENST00000485871 KCNH5Q8NCM2 988 aa15.19■□□□□ 0.02
SND1-212ENST00000485871 BLMP54132 1417 aaPredicted RBP15.18■□□□□ 0.02
SND1-212ENST00000485871 ABCC6O95255 1503 aa15.18■□□□□ 0.02
SND1-212ENST00000485871 GCP02774 474 aa15.18■□□□□ 0.02
SND1-212ENST00000485871 C8orf37Q96NL8 207 aa15.18■□□□□ 0.02
SND1-212ENST00000485871 RTL1A6NKG5 1358 aa15.18■□□□□ 0.02
SND1-212ENST00000485871 LMO7Q8WWI1 1683 aa15.17■□□□□ 0.02
SND1-212ENST00000485871 FLT4P35916 1363 aa15.17■□□□□ 0.02
SND1-212ENST00000485871 CFAP53Q96M91 514 aa15.17■□□□□ 0.02
SND1-212ENST00000485871 YTHDC1Q96MU7 727 aaKnown RBP15.17■□□□□ 0.02
SND1-212ENST00000485871 RGPD2P0DJD1 1756 aa15.16■□□□□ 0.02
SND1-212ENST00000485871 SOX12O15370 315 aa15.16■□□□□ 0.02
SND1-212ENST00000485871 LMOD2Q6P5Q4 547 aa15.16■□□□□ 0.02
SND1-212ENST00000485871 ARHGEF25Q86VW2 580 aa15.16■□□□□ 0.02
SND1-212ENST00000485871 FAM9BQ8IZU0 186 aa15.16■□□□□ 0.02
SND1-212ENST00000485871 CAMTA1Q9Y6Y1 1673 aa15.16■□□□□ 0.02
SND1-212ENST00000485871 CPDO75976 1380 aa15.15■□□□□ 0.02
SND1-212ENST00000485871 LRRC59Q96AG4 307 aaKnown RBP15.15■□□□□ 0.02
SND1-212ENST00000485871 NGLY1Q96IV0 654 aa15.15■□□□□ 0.02
SND1-212ENST00000485871 RGS12O14924 1447 aa15.15■□□□□ 0.02
SND1-212ENST00000485871 HOXC9P31274 260 aa15.14■□□□□ 0.01
SND1-212ENST00000485871 IL13P35225 146 aa15.14■□□□□ 0.01
SND1-212ENST00000485871 CABLES1Q8TDN4 633 aa15.14■□□□□ 0.01
SND1-212ENST00000485871 ADAMTS8Q9UP79 889 aa15.14■□□□□ 0.01
SND1-212ENST00000485871 PPM1GO15355 546 aaPredicted RBP15.13■□□□□ 0.01
SND1-212ENST00000485871 DIAPH1O60610 1272 aaKnown RBP15.13■□□□□ 0.01
SND1-212ENST00000485871 HSP90AB2PQ58FF8 381 aa15.13■□□□□ 0.01
SND1-212ENST00000485871 EIF4A2Q14240 407 aaKnown RBP15.12■□□□□ 0.01
SND1-212ENST00000485871 IP6K1Q92551 441 aa15.12■□□□□ 0.01
SND1-212ENST00000485871 FAM208AQ9UK61 1670 aaKnown RBP15.12■□□□□ 0.01
SND1-212ENST00000485871 AMPHP49418 695 aa15.11■□□□□ 0.01
SND1-212ENST00000485871 WDR43Q15061 677 aaKnown RBP eCLIP15.11■□□□□ 0.017e-7■□□□□ 8.4
SND1-212ENST00000485871 ADAMTS2O95450 1211 aa15.1■□□□□ 0.01
SND1-212ENST00000485871 KIAA0232Q92628 1395 aa15.1■□□□□ 0.01
SND1-212ENST00000485871 NCAPD2Q15021 1401 aa15.09■□□□□ 0.01
SND1-212ENST00000485871 COL14A1Q05707 1796 aaKnown RBP15.09■□□□□ 0.01
SND1-212ENST00000485871 PLEKHG5O94827 1062 aa15.09■□□□□ 0.01
SND1-212ENST00000485871 ZC3H6P61129 1189 aaKnown RBP15.08■□□□□ 0
SND1-212ENST00000485871 NUDCQ9Y266 331 aa15.08■□□□□ 0
SND1-212ENST00000485871 IGSF1Q8N6C5 1336 aa15.08■□□□□ 0
SND1-212ENST00000485871 PLCH1Q4KWH8 1693 aa15.07■□□□□ 0
SND1-212ENST00000485871 AXIN2Q9Y2T1 843 aa15.07■□□□□ 0
SND1-212ENST00000485871 KDRP35968 1356 aa15.07■□□□□ 0
SND1-212ENST00000485871 DLG5Q8TDM6 1919 aa15.06■□□□□ 0
SND1-212ENST00000485871 U2AF1L5P0DN76 240 aaPredicted RBP15.06■□□□□ 0
SND1-212ENST00000485871 U2AF1Q01081 240 aaKnown RBP eCLIP15.06■□□□□ 0
SND1-212ENST00000485871 PLEKHF1Q96S99 279 aa15.06■□□□□ 0
SND1-212ENST00000485871 RSPH6AQ9H0K4 717 aa15.06■□□□□ 0
SND1-212ENST00000485871 USP21Q9UK80 565 aa15.06■□□□□ 0
SND1-212ENST00000485871 NRAPQ86VF7 1730 aa15.06■□□□□ 0
SND1-212ENST00000485871 U2SURPO15042 1029 aaKnown RBP15.05■□□□□ -0
SND1-212ENST00000485871 TRPC5Q9UL62 973 aaPredicted RBP15.05■□□□□ -0
SND1-212ENST00000485871 NWD2Q9ULI1 1742 aa15.04■□□□□ -0
SND1-212ENST00000485871 ERBB3P21860 1342 aa15.04■□□□□ -0
SND1-212ENST00000485871 HNRNPUQ00839 825 aaKnown RBP eCLIP15.04■□□□□ -0
SND1-212ENST00000485871 CHRNA2Q15822 529 aa15.04■□□□□ -0
SND1-212ENST00000485871 CCDC125Q86Z20 511 aa15.04■□□□□ -0
SND1-212ENST00000485871 EYA1Q99502 592 aa15.04■□□□□ -0
SND1-212ENST00000485871 COL5A2P05997 1499 aaPredicted RBP15.03■□□□□ -0
SND1-212ENST00000485871 FCHSD2O94868 740 aa15.03■□□□□ -0
SND1-212ENST00000485871 CCDC146Q8IYE0 955 aa15.03■□□□□ -0
SND1-212ENST00000485871 RUNDC1Q96C34 613 aa15.03■□□□□ -0
SND1-212ENST00000485871 ZBED9Q6R2W3 1325 aa15.02■□□□□ -0
SND1-212ENST00000485871 ZBTB7CA1YPR0 619 aa15.02■□□□□ -0
SND1-212ENST00000485871 AEBP1Q8IUX7 1158 aa15.02■□□□□ -0
SND1-212ENST00000485871 ANKRD24Q8TF21 1146 aa15.02■□□□□ -0
SND1-212ENST00000485871 PRDM11Q9NQV5 511 aa15.02■□□□□ -0
SND1-212ENST00000485871 GTF3C3Q9Y5Q9 886 aa15.02■□□□□ -0
SND1-212ENST00000485871 FAM83GA6ND36 823 aa15.01□□□□□ -0.01
SND1-212ENST00000485871 HMOX1P09601 288 aa15.01□□□□□ -0.01
SND1-212ENST00000485871 PRKAR2BP31323 418 aa15□□□□□ -0.01
SND1-212ENST00000485871 NBPF6Q5VWK0 638 aa15□□□□□ -0.01
SND1-212ENST00000485871 SULT6B1Q6IMI4 303 aa15□□□□□ -0.01
SND1-212ENST00000485871 LTV1Q96GA3 475 aaPredicted RBP15□□□□□ -0.01
SND1-212ENST00000485871 NBPF4Q96M43 638 aa15□□□□□ -0.01
SND1-212ENST00000485871 WNK3Q9BYP7 1800 aa14.99□□□□□ -0.01
SND1-212ENST00000485871 ZNF521Q96K83 1311 aa14.99□□□□□ -0.01
SND1-212ENST00000485871 APAF1O14727 1248 aa14.99□□□□□ -0.01
SND1-212ENST00000485871 HAP1P54257 671 aaPredicted RBP14.99□□□□□ -0.01
SND1-212ENST00000485871 NCBP3Q53F19 620 aaKnown RBP14.99□□□□□ -0.01
SND1-212ENST00000485871 SLIT2O94813 1529 aa14.98□□□□□ -0.01
SND1-212ENST00000485871 PKD1L3Q7Z443 1732 aa14.98□□□□□ -0.01
SND1-212ENST00000485871 SENP3-EIF4A1A0A087X0R7 540 aa14.98□□□□□ -0.01
SND1-212ENST00000485871 TCP11L2Q8N4U5 519 aa14.98□□□□□ -0.01
SND1-212ENST00000485871 PHACTR3Q96KR7 559 aa14.98□□□□□ -0.01
SND1-212ENST00000485871 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.97□□□□□ -0.01
SND1-212ENST00000485871 VIRMAQ69YN4 1812 aaKnown RBP14.97□□□□□ -0.01
SND1-212ENST00000485871 FNBP4Q8N3X1 1017 aaPredicted RBP14.97□□□□□ -0.01
SND1-212ENST00000485871 PNNQ9H307 717 aaKnown RBP14.97□□□□□ -0.01
SND1-212ENST00000485871 WDR17Q8IZU2 1322 aa14.96□□□□□ -0.01
SND1-212ENST00000485871 TMPOP42166 694 aaKnown RBP14.96□□□□□ -0.01
SND1-212ENST00000485871 NGEFQ8N5V2 710 aa14.96□□□□□ -0.01
SND1-212ENST00000485871 PARP4Q9UKK3 1724 aaKnown RBP14.96□□□□□ -0.01
SND1-212ENST00000485871 SHANK3Q9BYB0 1731 aa14.95□□□□□ -0.02
SND1-212ENST00000485871 USHBP1Q8N6Y0 703 aa14.95□□□□□ -0.02
SND1-212ENST00000485871 MEGF6O75095 1541 aa14.94□□□□□ -0.02
SND1-212ENST00000485871 CCDC27Q2M243 656 aa14.94□□□□□ -0.02
SND1-212ENST00000485871 PLEKHG2Q9H7P9 1386 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms