RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 NUTM2BA6NNL0 878 aaPredicted RBP6.62□□□□□ -1.35
PRPF38B-205ENST00000485810 NUTM2EB1AL46 878 aaPredicted RBP6.62□□□□□ -1.35
PRPF38B-205ENST00000485810 PTSQ03393 145 aa6.62□□□□□ -1.35
PRPF38B-205ENST00000485810 RNFT1Q5M7Z0 435 aa6.62□□□□□ -1.35
PRPF38B-205ENST00000485810 NUTM2DQ5VT03 806 aaPredicted RBP6.62□□□□□ -1.35
PRPF38B-205ENST00000485810 Q6ZVU0 165 aa6.62□□□□□ -1.35
PRPF38B-205ENST00000485810 NUTM2AQ8IVF1 878 aaPredicted RBP6.62□□□□□ -1.35
PRPF38B-205ENST00000485810 CCDC116Q8IYX3 515 aa6.62□□□□□ -1.35
PRPF38B-205ENST00000485810 CNTNAP3BQ96NU0 1288 aa6.62□□□□□ -1.35
PRPF38B-205ENST00000485810 TSEN34Q9BSV6 310 aaKnown RBP6.62□□□□□ -1.35
PRPF38B-205ENST00000485810 CNTNAP3Q9BZ76 1288 aa6.62□□□□□ -1.35
PRPF38B-205ENST00000485810 MAGEB6P1A0A0J9YX57 407 aa6.61□□□□□ -1.35
PRPF38B-205ENST00000485810 TTLL8A6PVC2 850 aa6.61□□□□□ -1.35
PRPF38B-205ENST00000485810 UPP2O95045 317 aa6.61□□□□□ -1.35
PRPF38B-205ENST00000485810 PPP1R26Q5T8A7 1209 aaPredicted RBP6.61□□□□□ -1.35
PRPF38B-205ENST00000485810 ARMC2Q8NEN0 867 aa6.61□□□□□ -1.35
PRPF38B-205ENST00000485810 GPBP1L1Q9HC44 474 aaPredicted RBP6.61□□□□□ -1.35
PRPF38B-205ENST00000485810 EMILIN1Q9Y6C2 1016 aa6.61□□□□□ -1.35
PRPF38B-205ENST00000485810 SPINT1O43278 529 aa6.6□□□□□ -1.35
PRPF38B-205ENST00000485810 CTDSPL2Q05D32 466 aa6.6□□□□□ -1.35
PRPF38B-205ENST00000485810 NBPF14Q5TI25 921 aa6.6□□□□□ -1.35
PRPF38B-205ENST00000485810 NANOS1Q8WY41 292 aaKnown RBP6.6□□□□□ -1.35
PRPF38B-205ENST00000485810 OCSTAMPQ9BR26 566 aa6.6□□□□□ -1.35
PRPF38B-205ENST00000485810 CARD14Q9BXL6 1004 aa6.6□□□□□ -1.35
PRPF38B-205ENST00000485810 COL25A1Q9BXS0 654 aaPredicted RBP6.6□□□□□ -1.35
PRPF38B-205ENST00000485810 ADAMTS8Q9UP79 889 aa6.6□□□□□ -1.35
PRPF38B-205ENST00000485810 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.59□□□□□ -1.35
PRPF38B-205ENST00000485810 WHAMMQ8TF30 809 aa6.59□□□□□ -1.35
PRPF38B-205ENST00000485810 GTF3C3Q9Y5Q9 886 aa6.59□□□□□ -1.35
PRPF38B-205ENST00000485810 SLC35F4A4IF30 521 aa6.58□□□□□ -1.36
PRPF38B-205ENST00000485810 RASSF7Q02833 373 aa6.58□□□□□ -1.36
PRPF38B-205ENST00000485810 ZNF385CQ66K41 422 aaPredicted RBP6.58□□□□□ -1.36
PRPF38B-205ENST00000485810 CCDC155Q8N6L0 562 aa6.58□□□□□ -1.36
PRPF38B-205ENST00000485810 RNF225M0QZC1 329 aaPredicted RBP6.57□□□□□ -1.36
PRPF38B-205ENST00000485810 CTSOP43234 321 aaPredicted RBP6.57□□□□□ -1.36
PRPF38B-205ENST00000485810 CLK2P49760 499 aaKnown RBP6.57□□□□□ -1.36
PRPF38B-205ENST00000485810 HELBQ8NG08 1087 aaPredicted RBP6.57□□□□□ -1.36
PRPF38B-205ENST00000485810 LRRN4Q8WUT4 740 aa6.57□□□□□ -1.36
PRPF38B-205ENST00000485810 AGBL1Q96MI9 1066 aa6.57□□□□□ -1.36
PRPF38B-205ENST00000485810 POLR3EQ9NVU0 708 aa6.57□□□□□ -1.36
PRPF38B-205ENST00000485810 ARHGEF15O94989 841 aa6.57□□□□□ -1.36
PRPF38B-205ENST00000485810 GPKOWQ92917 476 aaPredicted RBP eCLIP6.57□□□□□ -1.36
PRPF38B-205ENST00000485810 SENP3-EIF4A1A0A087X0R7 540 aa6.56□□□□□ -1.36
PRPF38B-205ENST00000485810 PDXDC2PQ6P474 469 aa6.56□□□□□ -1.36
PRPF38B-205ENST00000485810 VWA5B2Q8N398 1253 aa6.56□□□□□ -1.36
PRPF38B-205ENST00000485810 TMEM151AQ8N4L1 468 aa6.56□□□□□ -1.36
PRPF38B-205ENST00000485810 KCTD15Q96SI1 283 aaPredicted RBP6.56□□□□□ -1.36
PRPF38B-205ENST00000485810 PODXL2Q9NZ53 605 aa6.56□□□□□ -1.36
PRPF38B-205ENST00000485810 CCDC180Q9P1Z9 1646 aa6.56□□□□□ -1.36
PRPF38B-205ENST00000485810 GDF11O95390 407 aa6.55□□□□□ -1.36
PRPF38B-205ENST00000485810 SLURP2P0DP57 97 aa6.55□□□□□ -1.36
PRPF38B-205ENST00000485810 ITGA6P23229 1130 aa6.55□□□□□ -1.36
PRPF38B-205ENST00000485810 INTS6LQ5JSJ4 861 aaKnown RBP6.55□□□□□ -1.36
PRPF38B-205ENST00000485810 KDF1Q8NAX2 398 aaPredicted RBP6.55□□□□□ -1.36
PRPF38B-205ENST00000485810 INSM2Q96T92 566 aaPredicted RBP6.55□□□□□ -1.36
PRPF38B-205ENST00000485810 FAM117AQ9C073 453 aa6.55□□□□□ -1.36
PRPF38B-205ENST00000485810 KDM4CQ9H3R0 1056 aa6.55□□□□□ -1.36
PRPF38B-205ENST00000485810 PGPEP1Q9NXJ5 209 aa6.55□□□□□ -1.36
PRPF38B-205ENST00000485810 FKBPLQ9UIM3 349 aa6.55□□□□□ -1.36
PRPF38B-205ENST00000485810 NR6A1Q15406 480 aa6.54□□□□□ -1.36
PRPF38B-205ENST00000485810 ARHGAP9Q9BRR9 750 aa6.54□□□□□ -1.36
PRPF38B-205ENST00000485810 ADD1P35611 737 aaKnown RBP6.53□□□□□ -1.36
PRPF38B-205ENST00000485810 RNF217Q8TC41 542 aa6.53□□□□□ -1.36
PRPF38B-205ENST00000485810 TMPRSS4Q9NRS4 437 aa6.53□□□□□ -1.36
PRPF38B-205ENST00000485810 CUEDC1Q9NWM3 386 aaPredicted RBP6.53□□□□□ -1.36
PRPF38B-205ENST00000485810 RELBQ01201 579 aa6.52□□□□□ -1.37
PRPF38B-205ENST00000485810 PROCA1Q8NCQ7 364 aaPredicted RBP6.52□□□□□ -1.37
PRPF38B-205ENST00000485810 EPS8L1Q8TE68 723 aa6.52□□□□□ -1.37
PRPF38B-205ENST00000485810 ZCCHC6Q5VYS8 1495 aaKnown RBP6.52□□□□□ -1.37
PRPF38B-205ENST00000485810 LILRA1O75019 489 aa6.51□□□□□ -1.37
PRPF38B-205ENST00000485810 FOXD4L5Q5VV16 416 aaPredicted RBP6.51□□□□□ -1.37
PRPF38B-205ENST00000485810 ZNF395Q9H8N7 513 aaPredicted RBP6.51□□□□□ -1.37
PRPF38B-205ENST00000485810 GAS6Q14393 721 aa6.5□□□□□ -1.37
PRPF38B-205ENST00000485810 SV2AQ7L0J3 742 aa6.5□□□□□ -1.37
PRPF38B-205ENST00000485810 ADAM32Q8TC27 787 aa6.5□□□□□ -1.37
PRPF38B-205ENST00000485810 SLC10A4Q96EP9 437 aa6.5□□□□□ -1.37
PRPF38B-205ENST00000485810 RSPH6AQ9H0K4 717 aa6.5□□□□□ -1.37
PRPF38B-205ENST00000485810 ATP1B4Q9UN42 357 aaPredicted RBP6.5□□□□□ -1.37
PRPF38B-205ENST00000485810 PPP2R2DQ66LE6 453 aa6.49□□□□□ -1.37
PRPF38B-205ENST00000485810 LYPD4Q6UWN0 246 aa6.49□□□□□ -1.37
PRPF38B-205ENST00000485810 ZBTB33Q86T24 672 aa6.49□□□□□ -1.37
PRPF38B-205ENST00000485810 SVOPQ8N4V2 548 aa6.49□□□□□ -1.37
PRPF38B-205ENST00000485810 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.49□□□□□ -1.37
PRPF38B-205ENST00000485810 CDV3Q9UKY7 258 aaKnown RBP6.49□□□□□ -1.37
PRPF38B-205ENST00000485810 ZC3H4Q9UPT8 1303 aaKnown RBP6.49□□□□□ -1.37
PRPF38B-205ENST00000485810 CDC14CA4D256 554 aa6.48□□□□□ -1.37
PRPF38B-205ENST00000485810 EIF5BO60841 1220 aaKnown RBP6.48□□□□□ -1.37
PRPF38B-205ENST00000485810 IRS1P35568 1242 aa6.48□□□□□ -1.37
PRPF38B-205ENST00000485810 DHX9Q08211 1270 aaKnown RBP6.48□□□□□ -1.37
PRPF38B-205ENST00000485810 ZNF784Q8NCA9 323 aaPredicted RBP6.48□□□□□ -1.37
PRPF38B-205ENST00000485810 HMX1Q9NP08 348 aaPredicted RBP6.48□□□□□ -1.37
PRPF38B-205ENST00000485810 ESPNB1AK53 854 aa6.47□□□□□ -1.37
PRPF38B-205ENST00000485810 ERVH48-1M5A8F1 160 aa6.47□□□□□ -1.37
PRPF38B-205ENST00000485810 IGHA1P01876 353 aa6.47□□□□□ -1.37
PRPF38B-205ENST00000485810 PTGIRP43119 386 aa6.47□□□□□ -1.37
PRPF38B-205ENST00000485810 SKIV2LQ15477 1246 aaKnown RBP6.47□□□□□ -1.37
PRPF38B-205ENST00000485810 NEUROD2Q15784 382 aa6.47□□□□□ -1.37
PRPF38B-205ENST00000485810 POLMQ9NP87 494 aaPredicted RBP6.47□□□□□ -1.37
PRPF38B-205ENST00000485810 ADAMTS2O95450 1211 aa6.46□□□□□ -1.37
PRPF38B-205ENST00000485810 ADH1AP07327 375 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms