RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 DNAJC5GQ8N7S2 189 aa9.58□□□□□ -0.88
CAPN13-206ENST00000485248 TRPM3Q9HCF6 1732 aaPredicted RBP9.58□□□□□ -0.88
CAPN13-206ENST00000485248 AKAP12Q02952 1782 aa9.58□□□□□ -0.88
CAPN13-206ENST00000485248 VPS8Q8N3P4 1428 aa9.57□□□□□ -0.88
CAPN13-206ENST00000485248 YBX3P16989 372 aaKnown RBP eCLIP9.57□□□□□ -0.88
CAPN13-206ENST00000485248 ZC3H6P61129 1189 aaKnown RBP9.57□□□□□ -0.88
CAPN13-206ENST00000485248 NLGN2Q8NFZ4 835 aa9.57□□□□□ -0.88
CAPN13-206ENST00000485248 SLC16A10Q8TF71 515 aa9.57□□□□□ -0.88
CAPN13-206ENST00000485248 CRYBG1Q9Y4K1 1723 aa9.56□□□□□ -0.88
CAPN13-206ENST00000485248 ATP7BP35670 1465 aa9.56□□□□□ -0.88
CAPN13-206ENST00000485248 LARP1Q6PKG0 1096 aaKnown RBP9.56□□□□□ -0.88
CAPN13-206ENST00000485248 IFNLR1Q8IU57 520 aaPredicted RBP9.56□□□□□ -0.88
CAPN13-206ENST00000485248 JMYQ8N9B5 988 aa9.56□□□□□ -0.88
CAPN13-206ENST00000485248 PEAK1Q9H792 1746 aa9.56□□□□□ -0.88
CAPN13-206ENST00000485248 PHRF1Q9P1Y6 1649 aaKnown RBP9.56□□□□□ -0.88
CAPN13-206ENST00000485248 PPLO60437 1756 aa9.55□□□□□ -0.88
CAPN13-206ENST00000485248 ADCY9O60503 1353 aa9.55□□□□□ -0.88
CAPN13-206ENST00000485248 EIF3AQ14152 1382 aaKnown RBP9.55□□□□□ -0.88
CAPN13-206ENST00000485248 ANKRD30BQ9BXX2 1392 aa9.55□□□□□ -0.88
CAPN13-206ENST00000485248 PLEKHH1Q9ULM0 1364 aa9.55□□□□□ -0.88
CAPN13-206ENST00000485248 NGDNQ8NEJ9 315 aaKnown RBP9.55□□□□□ -0.88
CAPN13-206ENST00000485248 LRRC37A3O60309 1634 aa9.55□□□□□ -0.88
CAPN13-206ENST00000485248 ANKARQ7Z5J8 1434 aa9.55□□□□□ -0.88
CAPN13-206ENST00000485248 KIF3CO14782 793 aa9.54□□□□□ -0.88
CAPN13-206ENST00000485248 ABCC11Q96J66 1382 aa9.53□□□□□ -0.88
CAPN13-206ENST00000485248 TULP4Q9NRJ4 1543 aa9.53□□□□□ -0.88
CAPN13-206ENST00000485248 TPRNQ4KMQ1 711 aa9.53□□□□□ -0.88
CAPN13-206ENST00000485248 ACIN1Q9UKV3 1341 aaKnown RBP9.53□□□□□ -0.88
CAPN13-206ENST00000485248 HSPA1AP0DMV8 641 aaKnown RBP9.52□□□□□ -0.89
CAPN13-206ENST00000485248 HSPA1BP0DMV9 641 aaKnown RBP9.52□□□□□ -0.89
CAPN13-206ENST00000485248 CRB1P82279 1406 aa9.52□□□□□ -0.89
CAPN13-206ENST00000485248 ARHGEF28Q8N1W1 1705 aaKnown RBP9.52□□□□□ -0.89
CAPN13-206ENST00000485248 SAFB2Q14151 953 aaKnown RBP eCLIP9.51□□□□□ -0.89
CAPN13-206ENST00000485248 FAM161AQ3B820 660 aa9.51□□□□□ -0.89
CAPN13-206ENST00000485248 POGKQ9P215 609 aa9.51□□□□□ -0.89
CAPN13-206ENST00000485248 YTHDC2Q9H6S0 1430 aaKnown RBP9.5□□□□□ -0.89
CAPN13-206ENST00000485248 ZBTB7CA1YPR0 619 aa9.5□□□□□ -0.89
CAPN13-206ENST00000485248 TOM1L2Q6ZVM7 507 aa9.5□□□□□ -0.89
CAPN13-206ENST00000485248 CDCA7Q9BWT1 371 aaPredicted RBP9.5□□□□□ -0.89
CAPN13-206ENST00000485248 HTRA3P83110 453 aa9.49□□□□□ -0.89
CAPN13-206ENST00000485248 MKRN4PQ13434 485 aaPredicted RBP9.49□□□□□ -0.89
CAPN13-206ENST00000485248 TMEM132EQ6IEE7 984 aa9.49□□□□□ -0.89
CAPN13-206ENST00000485248 PTF1AQ7RTS3 328 aa9.49□□□□□ -0.89
CAPN13-206ENST00000485248 RBM46Q8TBY0 533 aaKnown RBP9.49□□□□□ -0.89
CAPN13-206ENST00000485248 TFCP2L1Q9NZI6 479 aa9.49□□□□□ -0.89
CAPN13-206ENST00000485248 KDM2AQ9Y2K7 1162 aa9.49□□□□□ -0.89
CAPN13-206ENST00000485248 BRD4O60885 1362 aaPredicted RBP9.49□□□□□ -0.89
CAPN13-206ENST00000485248 QSER1Q2KHR3 1735 aa9.48□□□□□ -0.89
CAPN13-206ENST00000485248 FSTL1Q12841 308 aa9.48□□□□□ -0.89
CAPN13-206ENST00000485248 NUTM2GQ5VZR2 741 aa9.48□□□□□ -0.89
CAPN13-206ENST00000485248 PAPPAQ13219 1627 aa9.48□□□□□ -0.89
CAPN13-206ENST00000485248 ROCK1Q13464 1354 aa9.48□□□□□ -0.89
CAPN13-206ENST00000485248 GOLGB1Q14789 3259 aaKnown RBP9.48□□□□□ -0.89
CAPN13-206ENST00000485248 ITSN1Q15811 1721 aa9.48□□□□□ -0.89
CAPN13-206ENST00000485248 BCL9O00512 1426 aa9.48□□□□□ -0.89
CAPN13-206ENST00000485248 TNS2Q63HR2 1409 aa9.48□□□□□ -0.89
CAPN13-206ENST00000485248 COL5A2P05997 1499 aaPredicted RBP9.47□□□□□ -0.89
CAPN13-206ENST00000485248 WNK3Q9BYP7 1800 aa9.47□□□□□ -0.89
CAPN13-206ENST00000485248 SIRT1Q96EB6 747 aa9.47□□□□□ -0.89
CAPN13-206ENST00000485248 HIRIP3Q9BW71 556 aaPredicted RBP9.47□□□□□ -0.89
CAPN13-206ENST00000485248 NHSQ6T4R5 1651 aa9.46□□□□□ -0.89
CAPN13-206ENST00000485248 LMO7Q8WWI1 1683 aa9.46□□□□□ -0.89
CAPN13-206ENST00000485248 MLLT1Q03111 559 aaPredicted RBP9.46□□□□□ -0.9
CAPN13-206ENST00000485248 ZNF827Q17R98 1081 aa9.46□□□□□ -0.9
CAPN13-206ENST00000485248 PRAM1Q96QH2 718 aa9.46□□□□□ -0.9
CAPN13-206ENST00000485248 USP19O94966 1318 aa9.46□□□□□ -0.9
CAPN13-206ENST00000485248 COL24A1Q17RW2 1714 aa9.45□□□□□ -0.9
CAPN13-206ENST00000485248 EXOC5O00471 708 aa9.45□□□□□ -0.9
CAPN13-206ENST00000485248 MARCH10Q8NA82 808 aaPredicted RBP9.45□□□□□ -0.9
CAPN13-206ENST00000485248 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.45□□□□□ -0.9
CAPN13-206ENST00000485248 CD2APQ9Y5K6 639 aa9.45□□□□□ -0.9
CAPN13-206ENST00000485248 CSB-PGBD3P0DP91 1061 aa9.44□□□□□ -0.9
CAPN13-206ENST00000485248 ABTB2Q8N961 1025 aa9.44□□□□□ -0.9
CAPN13-206ENST00000485248 ACSBG1Q96GR2 724 aa9.44□□□□□ -0.9
CAPN13-206ENST00000485248 ADGRF5Q8IZF2 1346 aa9.44□□□□□ -0.9
CAPN13-206ENST00000485248 CPDO75976 1380 aa9.44□□□□□ -0.9
CAPN13-206ENST00000485248 PIK3C2AO00443 1686 aa9.44□□□□□ -0.9
CAPN13-206ENST00000485248 PNPLA7Q6ZV29 1317 aa9.43□□□□□ -0.9
CAPN13-206ENST00000485248 SLC27A3Q5K4L6 730 aa9.43□□□□□ -0.9
CAPN13-206ENST00000485248 BBXQ8WY36 941 aaPredicted RBP9.43□□□□□ -0.9
CAPN13-206ENST00000485248 AIDAQ96BJ3 306 aa9.43□□□□□ -0.9
CAPN13-206ENST00000485248 TRPM1Q7Z4N2 1603 aa9.42□□□□□ -0.9
CAPN13-206ENST00000485248 SMC1BQ8NDV3 1235 aa9.42□□□□□ -0.9
CAPN13-206ENST00000485248 NMRK2Q9NPI5 230 aa9.42□□□□□ -0.9
CAPN13-206ENST00000485248 BTAF1O14981 1849 aa9.42□□□□□ -0.9
CAPN13-206ENST00000485248 IGSF1Q8N6C5 1336 aa9.41□□□□□ -0.9
CAPN13-206ENST00000485248 KDM2BQ8NHM5 1336 aa9.41□□□□□ -0.9
CAPN13-206ENST00000485248 ITGAEP38570 1179 aa9.41□□□□□ -0.9
CAPN13-206ENST00000485248 RGL3Q3MIN7 710 aa9.41□□□□□ -0.9
CAPN13-206ENST00000485248 PAXIP1Q6ZW49 1069 aaPredicted RBP9.41□□□□□ -0.9
CAPN13-206ENST00000485248 NLRP13Q86W25 1043 aa9.41□□□□□ -0.9
CAPN13-206ENST00000485248 AKT1S1Q96B36 256 aa9.41□□□□□ -0.9
CAPN13-206ENST00000485248 PIK3C2GO75747 1445 aa9.4□□□□□ -0.9
CAPN13-206ENST00000485248 USP6P35125 1406 aa9.4□□□□□ -0.9
CAPN13-206ENST00000485248 MINK1Q8N4C8 1332 aaPredicted RBP9.4□□□□□ -0.9
CAPN13-206ENST00000485248 MSL1Q68DK7 614 aa9.4□□□□□ -0.9
CAPN13-206ENST00000485248 PLEKHG2Q9H7P9 1386 aa9.39□□□□□ -0.91
CAPN13-206ENST00000485248 TUBGCP6Q96RT7 1819 aa9.39□□□□□ -0.91
CAPN13-206ENST00000485248 WDR17Q8IZU2 1322 aa9.38□□□□□ -0.91
CAPN13-206ENST00000485248 WASLO00401 505 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms