RNA–Protein interactions for RNA: ENST00000484645.1

RAPGEF4-212, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 3

Gene RAPGEF4, Length 842 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-212ENST00000484645 NR1H3Q13133 447 aa10.68□□□□□ -0.7
RAPGEF4-212ENST00000484645 ZNF787Q6DD87 383 aa10.68□□□□□ -0.7
RAPGEF4-212ENST00000484645 ZNF592Q92610 1267 aa10.68□□□□□ -0.7
RAPGEF4-212ENST00000484645 TIMP2P16035 220 aa10.67□□□□□ -0.7
RAPGEF4-212ENST00000484645 ATP13A2Q9NQ11 1180 aa10.67□□□□□ -0.7
RAPGEF4-212ENST00000484645 PCDHB9Q9Y5E1 797 aa10.67□□□□□ -0.7
RAPGEF4-212ENST00000484645 EMILIN1Q9Y6C2 1016 aa10.67□□□□□ -0.7
RAPGEF4-212ENST00000484645 GPR37L1O60883 481 aa10.66□□□□□ -0.7
RAPGEF4-212ENST00000484645 ZIC2O95409 532 aaPredicted RBP10.66□□□□□ -0.7
RAPGEF4-212ENST00000484645 MCCD1P59942 119 aaPredicted RBP10.66□□□□□ -0.7
RAPGEF4-212ENST00000484645 DHX9Q08211 1270 aaKnown RBP10.66□□□□□ -0.7
RAPGEF4-212ENST00000484645 FLIIQ13045 1269 aa10.66□□□□□ -0.7
RAPGEF4-212ENST00000484645 KLF16Q9BXK1 252 aaPredicted RBP10.66□□□□□ -0.7
RAPGEF4-212ENST00000484645 ITPKCQ96DU7 683 aa10.65□□□□□ -0.7
RAPGEF4-212ENST00000484645 INTS6LQ5JSJ4 861 aaKnown RBP10.64□□□□□ -0.71
RAPGEF4-212ENST00000484645 PGPEP1Q9NXJ5 209 aa10.64□□□□□ -0.71
RAPGEF4-212ENST00000484645 PPP1R26Q5T8A7 1209 aaPredicted RBP10.63□□□□□ -0.71
RAPGEF4-212ENST00000484645 ZFAND3Q9H8U3 227 aa10.63□□□□□ -0.71
RAPGEF4-212ENST00000484645 SENP2Q9HC62 589 aa10.63□□□□□ -0.71
RAPGEF4-212ENST00000484645 GDPD2Q9HCC8 539 aa10.63□□□□□ -0.71
RAPGEF4-212ENST00000484645 GMPR2Q9P2T1 348 aaKnown RBP10.63□□□□□ -0.71
RAPGEF4-212ENST00000484645 ABL2P42684 1182 aa10.62□□□□□ -0.71
RAPGEF4-212ENST00000484645 SEPT12Q8IYM1 358 aa10.62□□□□□ -0.71
RAPGEF4-212ENST00000484645 POTECB2RU33 542 aa10.61□□□□□ -0.71
RAPGEF4-212ENST00000484645 BMP1P13497 986 aa10.61□□□□□ -0.71
RAPGEF4-212ENST00000484645 ESPNB1AK53 854 aa10.6□□□□□ -0.71
RAPGEF4-212ENST00000484645 C11orf95C9JLR9 678 aaPredicted RBP10.6□□□□□ -0.71
RAPGEF4-212ENST00000484645 RAB15P59190 212 aa10.6□□□□□ -0.71
RAPGEF4-212ENST00000484645 TRIM52Q96A61 297 aa10.6□□□□□ -0.71
RAPGEF4-212ENST00000484645 KIFC2Q96AC6 838 aa10.6□□□□□ -0.71
RAPGEF4-212ENST00000484645 IRF5Q13568 498 aa10.59□□□□□ -0.71
RAPGEF4-212ENST00000484645 SCARF1Q14162 830 aa10.59□□□□□ -0.71
RAPGEF4-212ENST00000484645 WASHC4Q2M389 1173 aa10.59□□□□□ -0.71
RAPGEF4-212ENST00000484645 MRPL14Q6P1L8 145 aaKnown RBP10.59□□□□□ -0.71
RAPGEF4-212ENST00000484645 TRIM46Q7Z4K8 759 aa10.59□□□□□ -0.71
RAPGEF4-212ENST00000484645 RAD21O60216 631 aa10.58□□□□□ -0.72
RAPGEF4-212ENST00000484645 UPP2O95045 317 aa10.58□□□□□ -0.72
RAPGEF4-212ENST00000484645 UBTFP17480 764 aaKnown RBP10.58□□□□□ -0.72
RAPGEF4-212ENST00000484645 EIF4G2P78344 907 aaKnown RBP eCLIP10.58□□□□□ -0.72
RAPGEF4-212ENST00000484645 RNF20Q5VTR2 975 aa10.58□□□□□ -0.72
RAPGEF4-212ENST00000484645 CCDC125Q86Z20 511 aa10.58□□□□□ -0.72
RAPGEF4-212ENST00000484645 TRIM47Q96LD4 638 aa10.58□□□□□ -0.72
RAPGEF4-212ENST00000484645 COG6Q9Y2V7 657 aa10.58□□□□□ -0.72
RAPGEF4-212ENST00000484645 GIGYF1O75420 1035 aaPredicted RBP10.57□□□□□ -0.72
RAPGEF4-212ENST00000484645 WWC1Q8IX03 1113 aa10.57□□□□□ -0.72
RAPGEF4-212ENST00000484645 MEIOBQ8N635 442 aa10.57□□□□□ -0.72
RAPGEF4-212ENST00000484645 ERVH48-1M5A8F1 160 aa10.56□□□□□ -0.72
RAPGEF4-212ENST00000484645 ZFP42Q96MM3 310 aa10.55□□□□□ -0.72
RAPGEF4-212ENST00000484645 PURBQ96QR8 312 aaKnown RBP10.55□□□□□ -0.72
RAPGEF4-212ENST00000484645 VAC14Q08AM6 782 aa10.54□□□□□ -0.72
RAPGEF4-212ENST00000484645 LINC00528Q8N1L1 170 aa10.54□□□□□ -0.72
RAPGEF4-212ENST00000484645 TSEN34Q9BSV6 310 aaKnown RBP10.54□□□□□ -0.72
RAPGEF4-212ENST00000484645 TMPRSS4Q9NRS4 437 aa10.54□□□□□ -0.72
RAPGEF4-212ENST00000484645 Q6ZVU0 165 aa10.53□□□□□ -0.72
RAPGEF4-212ENST00000484645 ZNF784Q8NCA9 323 aaPredicted RBP10.53□□□□□ -0.72
RAPGEF4-212ENST00000484645 BMP2P12643 396 aa10.52□□□□□ -0.73
RAPGEF4-212ENST00000484645 CBLBQ13191 982 aa10.52□□□□□ -0.73
RAPGEF4-212ENST00000484645 C6orf118Q5T5N4 469 aa10.52□□□□□ -0.73
RAPGEF4-212ENST00000484645 POM121Q96HA1 1249 aa10.52□□□□□ -0.73
RAPGEF4-212ENST00000484645 CEP126Q9P2H0 1117 aa10.52□□□□□ -0.73
RAPGEF4-212ENST00000484645 SNRPBP14678 240 aaKnown RBP10.51□□□□□ -0.73
RAPGEF4-212ENST00000484645 SOX11P35716 441 aa10.51□□□□□ -0.73
RAPGEF4-212ENST00000484645 SEMA3FQ13275 785 aa10.49□□□□□ -0.73
RAPGEF4-212ENST00000484645 CYLDQ9NQC7 956 aa10.49□□□□□ -0.73
RAPGEF4-212ENST00000484645 LILRA1O75019 489 aa10.48□□□□□ -0.73
RAPGEF4-212ENST00000484645 PCDHB11Q9Y5F2 797 aa10.48□□□□□ -0.73
RAPGEF4-212ENST00000484645 ADH1AP07327 375 aa10.47□□□□□ -0.73
RAPGEF4-212ENST00000484645 SLFNL1Q499Z3 407 aa10.47□□□□□ -0.73
RAPGEF4-212ENST00000484645 ADD1P35611 737 aaKnown RBP10.46□□□□□ -0.73
RAPGEF4-212ENST00000484645 RELBQ01201 579 aa10.46□□□□□ -0.73
RAPGEF4-212ENST00000484645 CC2D2BQ6DHV5 1058 aa10.46□□□□□ -0.73
RAPGEF4-212ENST00000484645 ESF1Q9H501 851 aaKnown RBP10.46□□□□□ -0.73
RAPGEF4-212ENST00000484645 ERVK-9P63128 1117 aa10.45□□□□□ -0.74
RAPGEF4-212ENST00000484645 RNF135Q8IUD6 432 aa10.45□□□□□ -0.74
RAPGEF4-212ENST00000484645 ZNF775Q96BV0 537 aaPredicted RBP10.45□□□□□ -0.74
RAPGEF4-212ENST00000484645 AGBL1Q96MI9 1066 aa10.45□□□□□ -0.74
RAPGEF4-212ENST00000484645 SPINT1O43278 529 aa10.44□□□□□ -0.74
RAPGEF4-212ENST00000484645 MAN1A2O60476 641 aa10.44□□□□□ -0.74
RAPGEF4-212ENST00000484645 SOS2Q07890 1332 aaPredicted RBP10.43□□□□□ -0.74
RAPGEF4-212ENST00000484645 TTLL8A6PVC2 850 aa10.42□□□□□ -0.74
RAPGEF4-212ENST00000484645 ATP5J2-PTCD1G3V325 749 aa10.42□□□□□ -0.74
RAPGEF4-212ENST00000484645 PTGIRP43119 386 aa10.42□□□□□ -0.74
RAPGEF4-212ENST00000484645 PHTF2Q8N3S3 785 aa10.42□□□□□ -0.74
RAPGEF4-212ENST00000484645 CLUAP1Q96AJ1 413 aa10.42□□□□□ -0.74
RAPGEF4-212ENST00000484645 CCDC85AQ96PX6 553 aaPredicted RBP10.42□□□□□ -0.74
RAPGEF4-212ENST00000484645 MYCP01106 439 aaPredicted RBP10.41□□□□□ -0.74
RAPGEF4-212ENST00000484645 ZNF395Q9H8N7 513 aaPredicted RBP10.41□□□□□ -0.74
RAPGEF4-212ENST00000484645 DOLKQ9UPQ8 538 aa10.41□□□□□ -0.74
RAPGEF4-212ENST00000484645 SCTRP47872 440 aa10.4□□□□□ -0.74
RAPGEF4-212ENST00000484645 CYP2U1Q7Z449 544 aa10.4□□□□□ -0.74
RAPGEF4-212ENST00000484645 PROSER2Q86WR7 435 aaPredicted RBP10.4□□□□□ -0.74
RAPGEF4-212ENST00000484645 ALG2Q9H553 416 aa10.4□□□□□ -0.74
RAPGEF4-212ENST00000484645 SOBPA7XYQ1 873 aa10.39□□□□□ -0.75
RAPGEF4-212ENST00000484645 INSM2Q96T92 566 aaPredicted RBP10.39□□□□□ -0.75
RAPGEF4-212ENST00000484645 POLMQ9NP87 494 aaPredicted RBP10.39□□□□□ -0.75
RAPGEF4-212ENST00000484645 USP4Q13107 963 aa10.38□□□□□ -0.75
RAPGEF4-212ENST00000484645 MAP7D1Q3KQU3 841 aa10.38□□□□□ -0.75
RAPGEF4-212ENST00000484645 KDF1Q8NAX2 398 aaPredicted RBP10.38□□□□□ -0.75
RAPGEF4-212ENST00000484645 SIRT1Q96EB6 747 aa10.38□□□□□ -0.75
RAPGEF4-212ENST00000484645 CDCA7Q9BWT1 371 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms