RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 TOM1O60784 492 aa14.22□□□□□ -0.13
EWSR1-217ENST00000483415 KRT28Q7Z3Y7 464 aa14.2□□□□□ -0.14
EWSR1-217ENST00000483415 CFAP53Q96M91 514 aa14.2□□□□□ -0.14
EWSR1-217ENST00000483415 FLT4P35916 1363 aa14.19□□□□□ -0.14
EWSR1-217ENST00000483415 NRAPQ86VF7 1730 aa14.19□□□□□ -0.14
EWSR1-217ENST00000483415 SENP3Q9H4L4 574 aaPredicted RBP14.19□□□□□ -0.14
EWSR1-217ENST00000483415 CERKQ8TCT0 537 aa14.18□□□□□ -0.14
EWSR1-217ENST00000483415 ORAI2Q96SN7 254 aa14.18□□□□□ -0.14
EWSR1-217ENST00000483415 BRPF3Q9ULD4 1205 aa14.17□□□□□ -0.14
EWSR1-217ENST00000483415 PARP4Q9UKK3 1724 aaKnown RBP14.17□□□□□ -0.14
EWSR1-217ENST00000483415 PNNQ9H307 717 aaKnown RBP14.17□□□□□ -0.14
EWSR1-217ENST00000483415 PNISRQ8TF01 805 aaKnown RBP14.17□□□□□ -0.14
EWSR1-217ENST00000483415 CC2D1BQ5T0F9 858 aaKnown RBP14.16□□□□□ -0.14
EWSR1-217ENST00000483415 NME9Q86XW9 330 aa14.16□□□□□ -0.14
EWSR1-217ENST00000483415 PMFBP1Q8TBY8 1022 aa14.16□□□□□ -0.14
EWSR1-217ENST00000483415 PKD1L3Q7Z443 1732 aa14.16□□□□□ -0.14
EWSR1-217ENST00000483415 RGPD5Q99666 1765 aa14.15□□□□□ -0.14
EWSR1-217ENST00000483415 ADAMTS7Q9UKP4 1686 aa14.15□□□□□ -0.14
EWSR1-217ENST00000483415 LRRC59Q96AG4 307 aaKnown RBP14.14□□□□□ -0.15
EWSR1-217ENST00000483415 POLKQ9UBT6 870 aa14.14□□□□□ -0.15
EWSR1-217ENST00000483415 NEFMP07197 916 aa14.13□□□□□ -0.15
EWSR1-217ENST00000483415 GGNBP2Q9H3C7 697 aa14.13□□□□□ -0.15
EWSR1-217ENST00000483415 ZBED9Q6R2W3 1325 aa14.13□□□□□ -0.15
EWSR1-217ENST00000483415 EIF5BO60841 1220 aaKnown RBP14.13□□□□□ -0.15
EWSR1-217ENST00000483415 RNF123Q5XPI4 1314 aa14.13□□□□□ -0.15
EWSR1-217ENST00000483415 KDRP35968 1356 aa14.13□□□□□ -0.15
EWSR1-217ENST00000483415 ABTB2Q8N961 1025 aa14.12□□□□□ -0.15
EWSR1-217ENST00000483415 MRS2Q9HD23 443 aa14.12□□□□□ -0.15
EWSR1-217ENST00000483415 NUDCQ9Y266 331 aa14.12□□□□□ -0.15
EWSR1-217ENST00000483415 LRRC37A3O60309 1634 aa14.11□□□□□ -0.15
EWSR1-217ENST00000483415 CCDC184Q52MB2 194 aa14.11□□□□□ -0.15
EWSR1-217ENST00000483415 NLRP6P59044 892 aa14.1□□□□□ -0.15
EWSR1-217ENST00000483415 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.1□□□□□ -0.15
EWSR1-217ENST00000483415 IP6K1Q92551 441 aa14.1□□□□□ -0.15
EWSR1-217ENST00000483415 FOXO3O43524 673 aa14.1□□□□□ -0.15
EWSR1-217ENST00000483415 ARHGEF25Q86VW2 580 aa14.1□□□□□ -0.15
EWSR1-217ENST00000483415 RSPH6AQ9H0K4 717 aa14.1□□□□□ -0.15
EWSR1-217ENST00000483415 MTHFSP49914 203 aa14.09□□□□□ -0.15
EWSR1-217ENST00000483415 VIRMAQ69YN4 1812 aaKnown RBP14.09□□□□□ -0.15
EWSR1-217ENST00000483415 JCADQ9P266 1359 aa14.09□□□□□ -0.15
EWSR1-217ENST00000483415 DLG5Q8TDM6 1919 aa14.09□□□□□ -0.15
EWSR1-217ENST00000483415 OVOS2A0A0G2JMS6 1433 aa14.09□□□□□ -0.15
EWSR1-217ENST00000483415 SPATA31A6Q5VVP1 1343 aa14.08□□□□□ -0.15
EWSR1-217ENST00000483415 RBM33Q96EV2 1170 aaKnown RBP14.08□□□□□ -0.16
EWSR1-217ENST00000483415 RGPD2P0DJD1 1756 aa14.08□□□□□ -0.16
EWSR1-217ENST00000483415 MAP3K19Q56UN5 1328 aa14.08□□□□□ -0.16
EWSR1-217ENST00000483415 DIAPH1O60610 1272 aaKnown RBP14.07□□□□□ -0.16
EWSR1-217ENST00000483415 IL13P35225 146 aa14.07□□□□□ -0.16
EWSR1-217ENST00000483415 LAS1LQ9Y4W2 734 aaKnown RBP14.07□□□□□ -0.16
EWSR1-217ENST00000483415 GCP02774 474 aa14.07□□□□□ -0.16
EWSR1-217ENST00000483415 NUTM2FA1L443 756 aa14.07□□□□□ -0.16
EWSR1-217ENST00000483415 CCDC27Q2M243 656 aa14.07□□□□□ -0.16
EWSR1-217ENST00000483415 IGSF1Q8N6C5 1336 aa14.06□□□□□ -0.16
EWSR1-217ENST00000483415 FCHSD2O94868 740 aa14.06□□□□□ -0.16
EWSR1-217ENST00000483415 GSE1Q14687 1217 aa14.06□□□□□ -0.16
EWSR1-217ENST00000483415 HOXC9P31274 260 aa14.05□□□□□ -0.16
EWSR1-217ENST00000483415 LRP6O75581 1613 aa14.05□□□□□ -0.16
EWSR1-217ENST00000483415 PPM1GO15355 546 aaPredicted RBP14.05□□□□□ -0.16
EWSR1-217ENST00000483415 WDR43Q15061 677 aaKnown RBP eCLIP14.05□□□□□ -0.16
EWSR1-217ENST00000483415 SIPA1L3O60292 1781 aaPredicted RBP14.04□□□□□ -0.16
EWSR1-217ENST00000483415 PDE3BQ13370 1112 aa14.04□□□□□ -0.16
EWSR1-217ENST00000483415 SHANK3Q9BYB0 1731 aa14.04□□□□□ -0.16
EWSR1-217ENST00000483415 COL5A2P05997 1499 aaPredicted RBP14.04□□□□□ -0.16
EWSR1-217ENST00000483415 SLIT2O94813 1529 aa14.03□□□□□ -0.16
EWSR1-217ENST00000483415 FAM43AQ8N2R8 423 aa14.02□□□□□ -0.17
EWSR1-217ENST00000483415 RUNDC1Q96C34 613 aa14.02□□□□□ -0.17
EWSR1-217ENST00000483415 PHF23Q9BUL5 403 aaPredicted RBP14.02□□□□□ -0.17
EWSR1-217ENST00000483415 ZRANB1Q9UGI0 708 aa14.02□□□□□ -0.17
EWSR1-217ENST00000483415 SCN11AQ9UI33 1791 aa14.01□□□□□ -0.17
EWSR1-217ENST00000483415 UBAP1LF5GYI3 381 aa14.01□□□□□ -0.17
EWSR1-217ENST00000483415 PLEKHF1Q96S99 279 aa14.01□□□□□ -0.17
EWSR1-217ENST00000483415 EIF4A2Q14240 407 aaKnown RBP14□□□□□ -0.17
EWSR1-217ENST00000483415 EMILIN1Q9Y6C2 1016 aa14□□□□□ -0.17
EWSR1-217ENST00000483415 HTATSF1O43719 755 aaKnown RBP14□□□□□ -0.17
EWSR1-217ENST00000483415 AMPHP49418 695 aa13.99□□□□□ -0.17
EWSR1-217ENST00000483415 IL16Q14005 1332 aa13.99□□□□□ -0.17
EWSR1-217ENST00000483415 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.99□□□□□ -0.171e-7■■■□□ 18.9
EWSR1-217ENST00000483415 CICQ96RK0 1608 aaPredicted RBP13.99□□□□□ -0.17
EWSR1-217ENST00000483415 ZNF521Q96K83 1311 aa13.98□□□□□ -0.17
EWSR1-217ENST00000483415 FRAT1Q92837 279 aaPredicted RBP13.98□□□□□ -0.17
EWSR1-217ENST00000483415 ERBB3P21860 1342 aa13.98□□□□□ -0.17
EWSR1-217ENST00000483415 MRC1P22897 1456 aa13.98□□□□□ -0.17
EWSR1-217ENST00000483415 THSD7AQ9UPZ6 1657 aa13.97□□□□□ -0.17
EWSR1-217ENST00000483415 CRB1P82279 1406 aa13.97□□□□□ -0.17
EWSR1-217ENST00000483415 KIAA0232Q92628 1395 aa13.97□□□□□ -0.17
EWSR1-217ENST00000483415 KDM3BQ7LBC6 1761 aa13.97□□□□□ -0.17
EWSR1-217ENST00000483415 ZMYND15Q9H091 742 aa13.96□□□□□ -0.17
EWSR1-217ENST00000483415 ADAMTS8Q9UP79 889 aa13.96□□□□□ -0.17
EWSR1-217ENST00000483415 PAPPAQ13219 1627 aa13.96□□□□□ -0.17
EWSR1-217ENST00000483415 DISP2A7MBM2 1401 aa13.96□□□□□ -0.17
EWSR1-217ENST00000483415 LMOD3Q0VAK6 560 aa13.96□□□□□ -0.17
EWSR1-217ENST00000483415 FAM9BQ8IZU0 186 aa13.96□□□□□ -0.17
EWSR1-217ENST00000483415 WDR17Q8IZU2 1322 aa13.96□□□□□ -0.17
EWSR1-217ENST00000483415 ZNF831Q5JPB2 1677 aa13.96□□□□□ -0.18
EWSR1-217ENST00000483415 BACH2Q9BYV9 841 aa13.96□□□□□ -0.18
EWSR1-217ENST00000483415 RRS1Q15050 365 aaKnown RBP13.95□□□□□ -0.18
EWSR1-217ENST00000483415 PDE4AP27815 886 aa13.95□□□□□ -0.18
EWSR1-217ENST00000483415 NPM2Q86SE8 214 aaKnown RBP13.95□□□□□ -0.18
EWSR1-217ENST00000483415 BABAM1Q9NWV8 329 aa13.95□□□□□ -0.18
EWSR1-217ENST00000483415 THRAP3Q9Y2W1 955 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms