RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 HOXC9P31274 260 aa27.84■■■□□ 2.05
RXRB-204ENST00000483281 CCDC184Q52MB2 194 aa27.84■■■□□ 2.05
RXRB-204ENST00000483281 MRS2Q9HD23 443 aa27.82■■■□□ 2.04
RXRB-204ENST00000483281 HSP90AB2PQ58FF8 381 aa27.8■■■□□ 2.04
RXRB-204ENST00000483281 PRDM11Q9NQV5 511 aa27.8■■■□□ 2.04
RXRB-204ENST00000483281 COL3A1P02461 1466 aaPredicted RBP27.8■■■□□ 2.04
RXRB-204ENST00000483281 BLMP54132 1417 aaPredicted RBP27.8■■■□□ 2.04
RXRB-204ENST00000483281 FAM83GA6ND36 823 aa27.79■■■□□ 2.04
RXRB-204ENST00000483281 COL14A1Q05707 1796 aaKnown RBP27.78■■■□□ 2.04
RXRB-204ENST00000483281 NUTM2BA6NNL0 878 aaPredicted RBP27.77■■■□□ 2.04
RXRB-204ENST00000483281 NUTM2EB1AL46 878 aaPredicted RBP27.77■■■□□ 2.04
RXRB-204ENST00000483281 DIAPH1O60610 1272 aaKnown RBP27.77■■■□□ 2.04
RXRB-204ENST00000483281 NUTM2AQ8IVF1 878 aaPredicted RBP27.77■■■□□ 2.04
RXRB-204ENST00000483281 AXIN2Q9Y2T1 843 aa27.77■■■□□ 2.04
RXRB-204ENST00000483281 LMO7Q8WWI1 1683 aa27.77■■■□□ 2.04
RXRB-204ENST00000483281 RGPD5Q99666 1765 aa27.77■■■□□ 2.04
RXRB-204ENST00000483281 ZBTB7CA1YPR0 619 aa27.77■■■□□ 2.04
RXRB-204ENST00000483281 CHRNA2Q15822 529 aa27.76■■■□□ 2.03
RXRB-204ENST00000483281 IL13P35225 146 aa27.75■■■□□ 2.03
RXRB-204ENST00000483281 PNISRQ8TF01 805 aaKnown RBP27.75■■■□□ 2.03
RXRB-204ENST00000483281 NUDCQ9Y266 331 aa27.74■■■□□ 2.03
RXRB-204ENST00000483281 EIF4A2Q14240 407 aaKnown RBP27.73■■■□□ 2.03
RXRB-204ENST00000483281 ADAMTS2O95450 1211 aa27.73■■■□□ 2.03
RXRB-204ENST00000483281 CAMTA1Q9Y6Y1 1673 aa27.73■■■□□ 2.03
RXRB-204ENST00000483281 LRP6O75581 1613 aa27.71■■■□□ 2.03
RXRB-204ENST00000483281 ANKRD24Q8TF21 1146 aa27.69■■■□□ 2.02
RXRB-204ENST00000483281 ERBB3P21860 1342 aa27.68■■■□□ 2.02
RXRB-204ENST00000483281 NWD2Q9ULI1 1742 aa27.68■■■□□ 2.02
RXRB-204ENST00000483281 BTG4Q9NY30 223 aa27.67■■■□□ 2.02
RXRB-204ENST00000483281 SLIT2O94813 1529 aa27.66■■■□□ 2.02
RXRB-204ENST00000483281 PLCH1Q4KWH8 1693 aa27.66■■■□□ 2.02
RXRB-204ENST00000483281 RGPD1P0DJD0 1748 aa27.66■■■□□ 2.02
RXRB-204ENST00000483281 COL5A2P05997 1499 aaPredicted RBP27.66■■■□□ 2.02
RXRB-204ENST00000483281 WDR43Q15061 677 aaKnown RBP eCLIP27.66■■■□□ 2.02
RXRB-204ENST00000483281 FAM208AQ9UK61 1670 aaKnown RBP27.66■■■□□ 2.02
RXRB-204ENST00000483281 FNBP4Q8N3X1 1017 aaPredicted RBP27.65■■■□□ 2.02
RXRB-204ENST00000483281 LTV1Q96GA3 475 aaPredicted RBP27.64■■■□□ 2.02
RXRB-204ENST00000483281 EYA1Q99502 592 aa27.64■■■□□ 2.01
RXRB-204ENST00000483281 WDR17Q8IZU2 1322 aa27.63■■■□□ 2.01
RXRB-204ENST00000483281 NGLY1Q96IV0 654 aa27.63■■■□□ 2.01
RXRB-204ENST00000483281 IGSF1Q8N6C5 1336 aa27.63■■■□□ 2.01
RXRB-204ENST00000483281 U2SURPO15042 1029 aaKnown RBP27.62■■■□□ 2.01
RXRB-204ENST00000483281 EVA1CP58658 441 aa27.62■■■□□ 2.01
RXRB-204ENST00000483281 ADAMTS8Q9UP79 889 aa27.62■■■□□ 2.01
RXRB-204ENST00000483281 U2AF1L5P0DN76 240 aaPredicted RBP27.61■■■□□ 2.01
RXRB-204ENST00000483281 U2AF1Q01081 240 aaKnown RBP eCLIP27.61■■■□□ 2.012e-7■■■■□ 22.9
RXRB-204ENST00000483281 MEX3CQ5U5Q3 659 aaKnown RBP27.61■■■□□ 2.01
RXRB-204ENST00000483281 C8orf37Q96NL8 207 aa27.61■■■□□ 2.01
RXRB-204ENST00000483281 RGPD2P0DJD1 1756 aa27.61■■■□□ 2.01
RXRB-204ENST00000483281 NBPF6Q5VWK0 638 aa27.6■■■□□ 2.01
RXRB-204ENST00000483281 NBPF4Q96M43 638 aa27.6■■■□□ 2.01
RXRB-204ENST00000483281 NRAPQ86VF7 1730 aa27.6■■■□□ 2.01
RXRB-204ENST00000483281 FCHSD2O94868 740 aa27.6■■■□□ 2.01
RXRB-204ENST00000483281 FAM9BQ8IZU0 186 aa27.6■■■□□ 2.01
RXRB-204ENST00000483281 NCAPD2Q15021 1401 aa27.59■■■□□ 2.01
RXRB-204ENST00000483281 CSB-PGBD3P0DP91 1061 aa27.59■■■□□ 2.01
RXRB-204ENST00000483281 PNNQ9H307 717 aaKnown RBP27.59■■■□□ 2.01
RXRB-204ENST00000483281 KDRP35968 1356 aa27.58■■■□□ 2.01
RXRB-204ENST00000483281 UNC5CLQ8IV45 518 aa27.57■■■□□ 2
RXRB-204ENST00000483281 BCL9LQ86UU0 1499 aa27.56■■■□□ 2
RXRB-204ENST00000483281 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.56■■■□□ 2
RXRB-204ENST00000483281 CARD10Q9BWT7 1032 aa27.56■■■□□ 2
RXRB-204ENST00000483281 STRN4Q9NRL3 753 aa27.56■■■□□ 2
RXRB-204ENST00000483281 LARP1Q6PKG0 1096 aaKnown RBP27.55■■■□□ 2
RXRB-204ENST00000483281 NLRP2Q9NX02 1062 aa27.55■■■□□ 2
RXRB-204ENST00000483281 CRB1P82279 1406 aa27.55■■■□□ 2
RXRB-204ENST00000483281 SULT6B1Q6IMI4 303 aa27.55■■■□□ 2
RXRB-204ENST00000483281 TOM1L2Q6ZVM7 507 aa27.55■■■□□ 2
RXRB-204ENST00000483281 RSPH6AQ9H0K4 717 aa27.54■■■□□ 2
RXRB-204ENST00000483281 HMOX1P09601 288 aa27.52■■■□□ 2
RXRB-204ENST00000483281 USP21Q9UK80 565 aa27.52■■■□□ 2
RXRB-204ENST00000483281 ILDR1Q86SU0 546 aaPredicted RBP27.51■■■□□ 2
RXRB-204ENST00000483281 PLEKHF1Q96S99 279 aa27.51■■□□□ 1.99
RXRB-204ENST00000483281 AFF2P51816 1311 aa27.51■■□□□ 1.99
RXRB-204ENST00000483281 VPS72Q15906 364 aa27.5■■□□□ 1.99
RXRB-204ENST00000483281 AEBP1Q8IUX7 1158 aa27.5■■□□□ 1.99
RXRB-204ENST00000483281 RUNDC1Q96C34 613 aa27.49■■□□□ 1.99
RXRB-204ENST00000483281 PLEKHG2Q9H7P9 1386 aa27.49■■□□□ 1.99
RXRB-204ENST00000483281 USHBP1Q8N6Y0 703 aa27.48■■□□□ 1.99
RXRB-204ENST00000483281 THRAP3Q9Y2W1 955 aaKnown RBP27.48■■□□□ 1.99
RXRB-204ENST00000483281 SPATA31A5Q5VU36 1347 aa27.47■■□□□ 1.99
RXRB-204ENST00000483281 SPATA31A7Q8IWB4 1347 aa27.47■■□□□ 1.99
RXRB-204ENST00000483281 PRKAR2BP31323 418 aa27.47■■□□□ 1.99
RXRB-204ENST00000483281 SPATA31A1Q5TZJ5 1347 aa27.46■■□□□ 1.99
RXRB-204ENST00000483281 NEFMP07197 916 aa27.44■■□□□ 1.98
RXRB-204ENST00000483281 TCP11L2Q8N4U5 519 aa27.44■■□□□ 1.98
RXRB-204ENST00000483281 RAPGEF4Q8WZA2 1011 aa27.43■■□□□ 1.98
RXRB-204ENST00000483281 TRPC5Q9UL62 973 aaPredicted RBP27.42■■□□□ 1.98
RXRB-204ENST00000483281 ATRNO75882 1429 aa27.42■■□□□ 1.98
RXRB-204ENST00000483281 CCDC146Q8IYE0 955 aa27.42■■□□□ 1.98
RXRB-204ENST00000483281 TATP17735 454 aaPredicted RBP27.41■■□□□ 1.98
RXRB-204ENST00000483281 NCBP3Q53F19 620 aaKnown RBP27.41■■□□□ 1.98
RXRB-204ENST00000483281 ZNF772Q68DY9 489 aaPredicted RBP27.41■■□□□ 1.98
RXRB-204ENST00000483281 BARGINQ6ZT62 677 aa27.41■■□□□ 1.98
RXRB-204ENST00000483281 PHACTR3Q96KR7 559 aa27.41■■□□□ 1.98
RXRB-204ENST00000483281 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.41■■□□□ 1.988e-7■■□□□ 11.4
RXRB-204ENST00000483281 CDCA7Q9BWT1 371 aaPredicted RBP27.4■■□□□ 1.98
RXRB-204ENST00000483281 MAPK8IP3Q9UPT6 1336 aa27.4■■□□□ 1.98
RXRB-204ENST00000483281 IL2RBP14784 551 aa27.4■■□□□ 1.98
RXRB-204ENST00000483281 AMOTQ4VCS5 1084 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms