RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 PANK3Q9H999 370 aa6.31□□□□□ -1.4
HDAC9-224ENST00000483142 LRP6O75581 1613 aa6.31□□□□□ -1.4
HDAC9-224ENST00000483142 JCADQ9P266 1359 aa6.31□□□□□ -1.4
HDAC9-224ENST00000483142 NUTM2FA1L443 756 aa6.3□□□□□ -1.4
HDAC9-224ENST00000483142 UBAP1LF5GYI3 381 aa6.3□□□□□ -1.4
HDAC9-224ENST00000483142 ZBTB47Q9UFB7 747 aaPredicted RBP6.3□□□□□ -1.4
HDAC9-224ENST00000483142 INSRP06213 1382 aa6.3□□□□□ -1.4
HDAC9-224ENST00000483142 PLEKHG2Q9H7P9 1386 aa6.3□□□□□ -1.4
HDAC9-224ENST00000483142 FOXO3O43524 673 aa6.29□□□□□ -1.4
HDAC9-224ENST00000483142 BLMP54132 1417 aaPredicted RBP6.29□□□□□ -1.4
HDAC9-224ENST00000483142 NGDNQ8NEJ9 315 aaKnown RBP6.29□□□□□ -1.4
HDAC9-224ENST00000483142 SPDYE1Q8NFV5 336 aaPredicted RBP6.29□□□□□ -1.4
HDAC9-224ENST00000483142 PMFBP1Q8TBY8 1022 aa6.29□□□□□ -1.4
HDAC9-224ENST00000483142 TMC1Q8TDI8 760 aa6.29□□□□□ -1.4
HDAC9-224ENST00000483142 RBM42Q9BTD8 480 aaKnown RBP6.29□□□□□ -1.4
HDAC9-224ENST00000483142 MAP2P11137 1827 aaKnown RBP6.28□□□□□ -1.4
HDAC9-224ENST00000483142 FYB1O15117 783 aa6.28□□□□□ -1.4
HDAC9-224ENST00000483142 HAP1P54257 671 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-224ENST00000483142 PSME1Q06323 249 aa6.28□□□□□ -1.4
HDAC9-224ENST00000483142 KRT28Q7Z3Y7 464 aa6.28□□□□□ -1.4
HDAC9-224ENST00000483142 NME9Q86XW9 330 aa6.28□□□□□ -1.4
HDAC9-224ENST00000483142 FBXO41Q8TF61 875 aa6.28□□□□□ -1.4
HDAC9-224ENST00000483142 SLIT2O94813 1529 aa6.28□□□□□ -1.4
HDAC9-224ENST00000483142 SPATA31A6Q5VVP1 1343 aa6.27□□□□□ -1.41
HDAC9-224ENST00000483142 DDX10Q13206 875 aaKnown RBP6.27□□□□□ -1.41
HDAC9-224ENST00000483142 PRKRIP1Q9H875 184 aaPredicted RBP6.27□□□□□ -1.41
HDAC9-224ENST00000483142 CIZ1Q9ULV3 898 aaPredicted RBP6.27□□□□□ -1.41
HDAC9-224ENST00000483142 KNSTRNQ9Y448 316 aa6.27□□□□□ -1.41
HDAC9-224ENST00000483142 FLT4P35916 1363 aa6.27□□□□□ -1.41
HDAC9-224ENST00000483142 PKD1L3Q7Z443 1732 aa6.26□□□□□ -1.41
HDAC9-224ENST00000483142 RALBP1Q15311 655 aa6.26□□□□□ -1.41
HDAC9-224ENST00000483142 NLRP13Q86W25 1043 aa6.26□□□□□ -1.41
HDAC9-224ENST00000483142 VSIG10Q8N0Z9 540 aa6.26□□□□□ -1.41
HDAC9-224ENST00000483142 DDX17Q92841 729 aaKnown RBP6.26□□□□□ -1.41
HDAC9-224ENST00000483142 LRRC59Q96AG4 307 aaKnown RBP6.26□□□□□ -1.41
HDAC9-224ENST00000483142 COL5A2P05997 1499 aaPredicted RBP6.26□□□□□ -1.41
HDAC9-224ENST00000483142 MYBBP1AQ9BQG0 1328 aaKnown RBP6.25□□□□□ -1.41
HDAC9-224ENST00000483142 PARP4Q9UKK3 1724 aaKnown RBP6.25□□□□□ -1.41
HDAC9-224ENST00000483142 PITPNM1O00562 1244 aa6.25□□□□□ -1.41
HDAC9-224ENST00000483142 HS6ST3Q8IZP7 471 aa6.25□□□□□ -1.41
HDAC9-224ENST00000483142 KCNH5Q8NCM2 988 aa6.25□□□□□ -1.41
HDAC9-224ENST00000483142 COG3Q96JB2 828 aa6.25□□□□□ -1.41
HDAC9-224ENST00000483142 POLR3GLQ9BT43 218 aa6.25□□□□□ -1.41
HDAC9-224ENST00000483142 GGNBP2Q9H3C7 697 aa6.25□□□□□ -1.41
HDAC9-224ENST00000483142 THSD7AQ9UPZ6 1657 aa6.25□□□□□ -1.41
HDAC9-224ENST00000483142 RGPD5Q99666 1765 aa6.25□□□□□ -1.41
HDAC9-224ENST00000483142 ADAMTS7Q9UKP4 1686 aa6.24□□□□□ -1.41
HDAC9-224ENST00000483142 PLEKHG5O94827 1062 aa6.24□□□□□ -1.41
HDAC9-224ENST00000483142 HSPA1LP34931 641 aa6.24□□□□□ -1.41
HDAC9-224ENST00000483142 XPCQ01831 940 aaPredicted RBP6.24□□□□□ -1.41
HDAC9-224ENST00000483142 ABTB2Q8N961 1025 aa6.24□□□□□ -1.41
HDAC9-224ENST00000483142 SHANK3Q9BYB0 1731 aa6.24□□□□□ -1.41
HDAC9-224ENST00000483142 LRRC37A3O60309 1634 aa6.24□□□□□ -1.41
HDAC9-224ENST00000483142 MAP3K19Q56UN5 1328 aa6.24□□□□□ -1.41
HDAC9-224ENST00000483142 KDRP35968 1356 aa6.23□□□□□ -1.41
HDAC9-224ENST00000483142 KIAA0232Q92628 1395 aa6.23□□□□□ -1.41
HDAC9-224ENST00000483142 NLRP6P59044 892 aa6.23□□□□□ -1.41
HDAC9-224ENST00000483142 PIP4K2BP78356 416 aa6.23□□□□□ -1.41
HDAC9-224ENST00000483142 NKX1-1Q15270 411 aaPredicted RBP6.23□□□□□ -1.41
HDAC9-224ENST00000483142 PAXIP1Q6ZW49 1069 aaPredicted RBP6.23□□□□□ -1.41
HDAC9-224ENST00000483142 ARHGEF25Q86VW2 580 aa6.23□□□□□ -1.41
HDAC9-224ENST00000483142 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.23□□□□□ -1.41
HDAC9-224ENST00000483142 RASEFQ8IZ41 740 aa6.23□□□□□ -1.41
HDAC9-224ENST00000483142 ZRANB1Q9UGI0 708 aa6.23□□□□□ -1.41
HDAC9-224ENST00000483142 DISP2A7MBM2 1401 aa6.23□□□□□ -1.41
HDAC9-224ENST00000483142 ERBB3P21860 1342 aa6.23□□□□□ -1.41
HDAC9-224ENST00000483142 GLI3P10071 1580 aa6.23□□□□□ -1.41
HDAC9-224ENST00000483142 RGPD2P0DJD1 1756 aa6.22□□□□□ -1.41
HDAC9-224ENST00000483142 CCER2I3L3R5 266 aa6.22□□□□□ -1.41
HDAC9-224ENST00000483142 GCP02774 474 aa6.22□□□□□ -1.41
HDAC9-224ENST00000483142 CHRM1P11229 460 aaPredicted RBP6.22□□□□□ -1.41
HDAC9-224ENST00000483142 PPP2R1AP30153 589 aa6.22□□□□□ -1.41
HDAC9-224ENST00000483142 GSE1Q14687 1217 aa6.22□□□□□ -1.41
HDAC9-224ENST00000483142 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.22□□□□□ -1.41
HDAC9-224ENST00000483142 POLKQ9UBT6 870 aa6.22□□□□□ -1.41
HDAC9-224ENST00000483142 ATRNO75882 1429 aa6.22□□□□□ -1.41
HDAC9-224ENST00000483142 IGSF1Q8N6C5 1336 aa6.22□□□□□ -1.41
HDAC9-224ENST00000483142 BCL9LQ86UU0 1499 aa6.22□□□□□ -1.41
HDAC9-224ENST00000483142 PRR29P0C7W0 189 aa6.21□□□□□ -1.42
HDAC9-224ENST00000483142 CC2D1BQ5T0F9 858 aaKnown RBP6.21□□□□□ -1.42
HDAC9-224ENST00000483142 DIEXFQ68CQ4 756 aaKnown RBP6.21□□□□□ -1.42
HDAC9-224ENST00000483142 MORC1Q86VD1 984 aa6.21□□□□□ -1.42
HDAC9-224ENST00000483142 TSHZ2Q9NRE2 1034 aa6.21□□□□□ -1.42
HDAC9-224ENST00000483142 CLEC11AQ9Y240 323 aa6.21□□□□□ -1.42
HDAC9-224ENST00000483142 CRB1P82279 1406 aa6.21□□□□□ -1.42
HDAC9-224ENST00000483142 ANP32CO43423 234 aa6.2□□□□□ -1.42
HDAC9-224ENST00000483142 PAK3O75914 559 aaPredicted RBP6.2□□□□□ -1.42
HDAC9-224ENST00000483142 HOXC9P31274 260 aa6.2□□□□□ -1.42
HDAC9-224ENST00000483142 EMILIN1Q9Y6C2 1016 aa6.2□□□□□ -1.42
HDAC9-224ENST00000483142 WDR17Q8IZU2 1322 aa6.2□□□□□ -1.42
HDAC9-224ENST00000483142 OVOS2A0A0G2JMS6 1433 aa6.19□□□□□ -1.42
HDAC9-224ENST00000483142 TNS2Q63HR2 1409 aa6.19□□□□□ -1.42
HDAC9-224ENST00000483142 RIOK3O14730 519 aaKnown RBP6.19□□□□□ -1.42
HDAC9-224ENST00000483142 SPRYD3Q8NCJ5 442 aa6.19□□□□□ -1.42
HDAC9-224ENST00000483142 IP6K1Q92551 441 aa6.19□□□□□ -1.42
HDAC9-224ENST00000483142 MRC1P22897 1456 aa6.19□□□□□ -1.42
HDAC9-224ENST00000483142 MEGF6O75095 1541 aa6.19□□□□□ -1.42
HDAC9-224ENST00000483142 CICQ96RK0 1608 aaPredicted RBP6.18□□□□□ -1.42
HDAC9-224ENST00000483142 IL13P35225 146 aa6.18□□□□□ -1.42
HDAC9-224ENST00000483142 MTHFSP49914 203 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms