RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 CLSPNQ9HAW4 1339 aa17.07■□□□□ 0.32
HDLBP-239ENST00000483086 PUS7Q96PZ0 661 aaKnown RBP17.07■□□□□ 0.32
HDLBP-239ENST00000483086 PEAK1Q9H792 1746 aa17.07■□□□□ 0.32
HDLBP-239ENST00000483086 CRB1P82279 1406 aa17.06■□□□□ 0.32
HDLBP-239ENST00000483086 EVA1CP58658 441 aa17.06■□□□□ 0.32
HDLBP-239ENST00000483086 SBF2Q86WG5 1849 aa17.05■□□□□ 0.32
HDLBP-239ENST00000483086 BARGINQ6ZT62 677 aa17.05■□□□□ 0.32
HDLBP-239ENST00000483086 CCDC125Q86Z20 511 aa17.04■□□□□ 0.32
HDLBP-239ENST00000483086 TCP11L2Q8N4U5 519 aa17.03■□□□□ 0.32
HDLBP-239ENST00000483086 RGPD2P0DJD1 1756 aa17.02■□□□□ 0.32
HDLBP-239ENST00000483086 ABCC6O95255 1503 aa17.02■□□□□ 0.32
HDLBP-239ENST00000483086 HDGFL2Q7Z4V5 671 aaPredicted RBP17.02■□□□□ 0.32
HDLBP-239ENST00000483086 TIMELESSQ9UNS1 1208 aa17.02■□□□□ 0.32
HDLBP-239ENST00000483086 KIF20BQ96Q89 1820 aa17.02■□□□□ 0.31
HDLBP-239ENST00000483086 WDR17Q8IZU2 1322 aa17.01■□□□□ 0.31
HDLBP-239ENST00000483086 FBLN1P23142 703 aa17.01■□□□□ 0.31
HDLBP-239ENST00000483086 KCNH5Q8NCM2 988 aa17.01■□□□□ 0.31
HDLBP-239ENST00000483086 DISP2A7MBM2 1401 aa17■□□□□ 0.31
HDLBP-239ENST00000483086 TERF2IPQ9NYB0 399 aa17■□□□□ 0.31
HDLBP-239ENST00000483086 ANKRD36BQ8N2N9 1353 aa17■□□□□ 0.31
HDLBP-239ENST00000483086 NINLQ9Y2I6 1382 aa17■□□□□ 0.31
HDLBP-239ENST00000483086 CCER1Q8TC90 406 aaPredicted RBP16.98■□□□□ 0.31
HDLBP-239ENST00000483086 THRAP3Q9Y2W1 955 aaKnown RBP16.98■□□□□ 0.31
HDLBP-239ENST00000483086 RREB1Q92766 1687 aa16.97■□□□□ 0.31
HDLBP-239ENST00000483086 TMF1P82094 1093 aa16.97■□□□□ 0.31
HDLBP-239ENST00000483086 TOM1L2Q6ZVM7 507 aa16.97■□□□□ 0.31
HDLBP-239ENST00000483086 TRIM37O94972 964 aa16.96■□□□□ 0.31
HDLBP-239ENST00000483086 EN1Q05925 392 aaPredicted RBP16.96■□□□□ 0.31
HDLBP-239ENST00000483086 CARD14Q9BXL6 1004 aa16.95■□□□□ 0.3
HDLBP-239ENST00000483086 NUP188Q5SRE5 1749 aa16.95■□□□□ 0.3
HDLBP-239ENST00000483086 ERBB3P21860 1342 aa16.95■□□□□ 0.3
HDLBP-239ENST00000483086 FAM208AQ9UK61 1670 aaKnown RBP16.94■□□□□ 0.3
HDLBP-239ENST00000483086 PTF1AQ7RTS3 328 aa16.94■□□□□ 0.3
HDLBP-239ENST00000483086 CARD10Q9BWT7 1032 aa16.94■□□□□ 0.3
HDLBP-239ENST00000483086 FYB1O15117 783 aa16.93■□□□□ 0.3
HDLBP-239ENST00000483086 PDE3BQ13370 1112 aa16.93■□□□□ 0.3
HDLBP-239ENST00000483086 FAM196AQ6ZSG2 479 aa16.93■□□□□ 0.3
HDLBP-239ENST00000483086 SF3B2Q13435 895 aaKnown RBP16.92■□□□□ 0.3
HDLBP-239ENST00000483086 EZH2Q15910 746 aaKnown RBP16.92■□□□□ 0.3
HDLBP-239ENST00000483086 MARCH10Q8NA82 808 aaPredicted RBP16.92■□□□□ 0.3
HDLBP-239ENST00000483086 GGNBP2Q9H3C7 697 aa16.92■□□□□ 0.3
HDLBP-239ENST00000483086 SHANK3Q9BYB0 1731 aa16.92■□□□□ 0.3
HDLBP-239ENST00000483086 MAP3K19Q56UN5 1328 aa16.92■□□□□ 0.3
HDLBP-239ENST00000483086 CSB-PGBD3P0DP91 1061 aa16.91■□□□□ 0.3
HDLBP-239ENST00000483086 HSPA5P11021 654 aaKnown RBP16.91■□□□□ 0.3
HDLBP-239ENST00000483086 CAMKK2Q96RR4 588 aa16.91■□□□□ 0.3
HDLBP-239ENST00000483086 SLC24A1O60721 1099 aa16.9■□□□□ 0.3
HDLBP-239ENST00000483086 BAG6P46379 1132 aa16.9■□□□□ 0.3
HDLBP-239ENST00000483086 ANKRD24Q8TF21 1146 aa16.9■□□□□ 0.3
HDLBP-239ENST00000483086 OVOS2A0A0G2JMS6 1433 aa16.89■□□□□ 0.29
HDLBP-239ENST00000483086 NSD3Q9BZ95 1437 aa16.89■□□□□ 0.29
HDLBP-239ENST00000483086 DDB1Q16531 1140 aa16.89■□□□□ 0.29
HDLBP-239ENST00000483086 IP6K1Q92551 441 aa16.89■□□□□ 0.29
HDLBP-239ENST00000483086 COG3Q96JB2 828 aa16.89■□□□□ 0.29
HDLBP-239ENST00000483086 ANKRD26Q9UPS8 1709 aa16.89■□□□□ 0.29
HDLBP-239ENST00000483086 MAP2P11137 1827 aaKnown RBP16.89■□□□□ 0.29
HDLBP-239ENST00000483086 CCDC7Q96M83 1385 aa16.89■□□□□ 0.29
HDLBP-239ENST00000483086 TNS2Q63HR2 1409 aa16.88■□□□□ 0.29
HDLBP-239ENST00000483086 RGPD3A6NKT7 1758 aaPredicted RBP16.88■□□□□ 0.29
HDLBP-239ENST00000483086 RGPD4Q7Z3J3 1758 aa16.88■□□□□ 0.29
HDLBP-239ENST00000483086 C11orf95C9JLR9 678 aaPredicted RBP16.88■□□□□ 0.29
HDLBP-239ENST00000483086 RRS1Q15050 365 aaKnown RBP16.88■□□□□ 0.29
HDLBP-239ENST00000483086 PSDA5PKW4 1024 aaPredicted RBP16.87■□□□□ 0.29
HDLBP-239ENST00000483086 APBA3O96018 575 aa16.87■□□□□ 0.29
HDLBP-239ENST00000483086 HOXC9P31274 260 aa16.87■□□□□ 0.29
HDLBP-239ENST00000483086 NHSQ6T4R5 1651 aa16.86■□□□□ 0.29
HDLBP-239ENST00000483086 NLRP2Q9NX02 1062 aa16.86■□□□□ 0.29
HDLBP-239ENST00000483086 LTV1Q96GA3 475 aaPredicted RBP16.85■□□□□ 0.29
HDLBP-239ENST00000483086 BCL9O00512 1426 aa16.85■□□□□ 0.29
HDLBP-239ENST00000483086 KAT6BQ8WYB5 2073 aa16.84■□□□□ 0.29
HDLBP-239ENST00000483086 CDCA8Q53HL2 280 aa16.84■□□□□ 0.29
HDLBP-239ENST00000483086 BTAF1O14981 1849 aa16.83■□□□□ 0.28
HDLBP-239ENST00000483086 MEGF6O75095 1541 aa16.83■□□□□ 0.28
HDLBP-239ENST00000483086 LRP5O75197 1615 aa16.83■□□□□ 0.28
HDLBP-239ENST00000483086 EIF4G2P78344 907 aaKnown RBP eCLIP16.83■□□□□ 0.28
HDLBP-239ENST00000483086 CDCA7Q9BWT1 371 aaPredicted RBP16.83■□□□□ 0.28
HDLBP-239ENST00000483086 RTL1A6NKG5 1358 aa16.81■□□□□ 0.28
HDLBP-239ENST00000483086 EXOC5O00471 708 aa16.81■□□□□ 0.28
HDLBP-239ENST00000483086 KCNQ2O43526 872 aa16.81■□□□□ 0.28
HDLBP-239ENST00000483086 IL2RBP14784 551 aa16.81■□□□□ 0.28
HDLBP-239ENST00000483086 R3HDM1Q15032 1099 aaKnown RBP16.81■□□□□ 0.28
HDLBP-239ENST00000483086 POLR3GLQ9BT43 218 aa16.81■□□□□ 0.28
HDLBP-239ENST00000483086 DOT1LQ8TEK3 1739 aa16.81■□□□□ 0.28
HDLBP-239ENST00000483086 AMPHP49418 695 aa16.8■□□□□ 0.28
HDLBP-239ENST00000483086 HSP90AB2PQ58FF8 381 aa16.8■□□□□ 0.28
HDLBP-239ENST00000483086 PROM2Q8N271 834 aa16.8■□□□□ 0.28
HDLBP-239ENST00000483086 EMILIN1Q9Y6C2 1016 aa16.8■□□□□ 0.28
HDLBP-239ENST00000483086 PARD3Q8TEW0 1356 aa16.79■□□□□ 0.28
HDLBP-239ENST00000483086 NBPF6Q5VWK0 638 aa16.79■□□□□ 0.28
HDLBP-239ENST00000483086 USHBP1Q8N6Y0 703 aa16.79■□□□□ 0.28
HDLBP-239ENST00000483086 NBPF4Q96M43 638 aa16.79■□□□□ 0.28
HDLBP-239ENST00000483086 BCL11BQ9C0K0 894 aaPredicted RBP16.78■□□□□ 0.28
HDLBP-239ENST00000483086 ACSBG1Q96GR2 724 aa16.77■□□□□ 0.28
HDLBP-239ENST00000483086 ANO8Q9HCE9 1232 aaPredicted RBP16.77■□□□□ 0.28
HDLBP-239ENST00000483086 INSRP06213 1382 aa16.77■□□□□ 0.27
HDLBP-239ENST00000483086 PANK3Q9H999 370 aa16.76■□□□□ 0.27
HDLBP-239ENST00000483086 CASZ1Q86V15 1759 aa16.76■□□□□ 0.27
HDLBP-239ENST00000483086 FLT4P35916 1363 aa16.76■□□□□ 0.27
HDLBP-239ENST00000483086 PLSCR1O15162 318 aa16.75■□□□□ 0.27
HDLBP-239ENST00000483086 PKD1L3Q7Z443 1732 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms