RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 ZBTB40Q9NUA8 1239 aa13.66□□□□□ -0.22
RPGR-208ENST00000482855 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.66□□□□□ -0.22
RPGR-208ENST00000482855 NOS1P29475 1434 aa13.66□□□□□ -0.22
RPGR-208ENST00000482855 CLTCL1P53675 1640 aa13.66□□□□□ -0.22
RPGR-208ENST00000482855 EXOSC9Q06265 439 aaKnown RBP13.66□□□□□ -0.22
RPGR-208ENST00000482855 RBSNQ9H1K0 784 aa13.66□□□□□ -0.22
RPGR-208ENST00000482855 KIF16BQ96L93 1317 aa13.65□□□□□ -0.22
RPGR-208ENST00000482855 MCM5P33992 734 aa13.65□□□□□ -0.22
RPGR-208ENST00000482855 ARID3AQ99856 593 aa13.65□□□□□ -0.22
RPGR-208ENST00000482855 ARHGAP23Q9P227 1491 aa13.65□□□□□ -0.22
RPGR-208ENST00000482855 MTHFSP49914 203 aa13.65□□□□□ -0.22
RPGR-208ENST00000482855 NOB1Q9ULX3 412 aaKnown RBP13.65□□□□□ -0.22
RPGR-208ENST00000482855 NUCB2P80303 420 aa13.64□□□□□ -0.23
RPGR-208ENST00000482855 SASS6Q6UVJ0 657 aa13.64□□□□□ -0.23
RPGR-208ENST00000482855 ADGRB2O60241 1585 aa13.64□□□□□ -0.23
RPGR-208ENST00000482855 U2AF1L5P0DN76 240 aaPredicted RBP13.63□□□□□ -0.23
RPGR-208ENST00000482855 U2AF1Q01081 240 aaKnown RBP eCLIP13.63□□□□□ -0.23
RPGR-208ENST00000482855 CFAP70Q5T0N1 1121 aa13.63□□□□□ -0.23
RPGR-208ENST00000482855 TBC1D9Q6ZT07 1266 aa13.63□□□□□ -0.23
RPGR-208ENST00000482855 UGGT1Q9NYU2 1555 aa13.63□□□□□ -0.23
RPGR-208ENST00000482855 LMBRD1Q9NUN5 540 aa13.63□□□□□ -0.23
RPGR-208ENST00000482855 TNRQ92752 1358 aa13.63□□□□□ -0.23
RPGR-208ENST00000482855 PRIM1P49642 420 aaKnown RBP13.63□□□□□ -0.23
RPGR-208ENST00000482855 ESF1Q9H501 851 aaKnown RBP13.63□□□□□ -0.23
RPGR-208ENST00000482855 CCDC39Q9UFE4 941 aa13.63□□□□□ -0.23
RPGR-208ENST00000482855 IPO8O15397 1037 aaKnown RBP13.62□□□□□ -0.23
RPGR-208ENST00000482855 PLEKHG5O94827 1062 aa13.62□□□□□ -0.23
RPGR-208ENST00000482855 ADGRB3O60242 1522 aa13.62□□□□□ -0.23
RPGR-208ENST00000482855 ANKRD45Q5TZF3 282 aa13.62□□□□□ -0.23
RPGR-208ENST00000482855 ABCC11Q96J66 1382 aa13.61□□□□□ -0.23
RPGR-208ENST00000482855 SBNO2Q9Y2G9 1366 aa13.61□□□□□ -0.23
RPGR-208ENST00000482855 RABEP1Q15276 862 aa13.6□□□□□ -0.23
RPGR-208ENST00000482855 GCC1Q96CN9 775 aa13.6□□□□□ -0.23
RPGR-208ENST00000482855 CCDC94Q9BW85 323 aaPredicted RBP13.6□□□□□ -0.23
RPGR-208ENST00000482855 PRDM10Q9NQV6 1147 aa13.6□□□□□ -0.23
RPGR-208ENST00000482855 KIF3BO15066 747 aa13.59□□□□□ -0.23
RPGR-208ENST00000482855 CDC45O75419 566 aa13.59□□□□□ -0.23
RPGR-208ENST00000482855 CYP2E1P05181 493 aaPredicted RBP13.59□□□□□ -0.23
RPGR-208ENST00000482855 USP32Q8NFA0 1604 aa13.59□□□□□ -0.23
RPGR-208ENST00000482855 A0A0U1RQG5 324 aaPredicted RBP13.59□□□□□ -0.23
RPGR-208ENST00000482855 SLC12A5Q9H2X9 1139 aa13.59□□□□□ -0.23
RPGR-208ENST00000482855 PRPF40AO75400 957 aaKnown RBP13.58□□□□□ -0.24
RPGR-208ENST00000482855 LRSAM1Q6UWE0 723 aa13.58□□□□□ -0.24
RPGR-208ENST00000482855 RBM27Q9P2N5 1060 aaKnown RBP13.58□□□□□ -0.24
RPGR-208ENST00000482855 ZHX1Q9UKY1 873 aaPredicted RBP13.58□□□□□ -0.24
RPGR-208ENST00000482855 MYOM2P54296 1465 aa13.58□□□□□ -0.24
RPGR-208ENST00000482855 UTP14CQ5TAP6 766 aaKnown RBP13.58□□□□□ -0.24
RPGR-208ENST00000482855 DIP2AQ14689 1571 aa13.57□□□□□ -0.24
RPGR-208ENST00000482855 DMTNQ08495 405 aa13.57□□□□□ -0.24
RPGR-208ENST00000482855 GPT2Q8TD30 523 aa13.57□□□□□ -0.24
RPGR-208ENST00000482855 TMEM131LA2VDJ0 1609 aa13.57□□□□□ -0.24
RPGR-208ENST00000482855 ADGRF5Q8IZF2 1346 aa13.56□□□□□ -0.24
RPGR-208ENST00000482855 TMPOP42166 694 aaKnown RBP13.56□□□□□ -0.24
RPGR-208ENST00000482855 CWC22Q9HCG8 908 aaKnown RBP13.56□□□□□ -0.24
RPGR-208ENST00000482855 PPIP5K1Q6PFW1 1433 aa13.56□□□□□ -0.24
RPGR-208ENST00000482855 LTBP4Q8N2S1 1624 aa13.56□□□□□ -0.24
RPGR-208ENST00000482855 IL16Q14005 1332 aa13.56□□□□□ -0.24
RPGR-208ENST00000482855 PTMAP06454 111 aaKnown RBP13.56□□□□□ -0.24
RPGR-208ENST00000482855 PKP1Q13835 747 aa13.56□□□□□ -0.24
RPGR-208ENST00000482855 SYCE3A1L190 88 aa13.55□□□□□ -0.24
RPGR-208ENST00000482855 KIAA2012Q0VF49 1180 aa13.55□□□□□ -0.24
RPGR-208ENST00000482855 CHMP4BQ9H444 224 aaKnown RBP13.55□□□□□ -0.24
RPGR-208ENST00000482855 TRIM35Q9UPQ4 493 aa13.55□□□□□ -0.24
RPGR-208ENST00000482855 CPS1P31327 1500 aa13.55□□□□□ -0.24
RPGR-208ENST00000482855 CFAP44Q96MT7 982 aa13.55□□□□□ -0.24
RPGR-208ENST00000482855 ALDH1L2Q3SY69 923 aa13.54□□□□□ -0.24
RPGR-208ENST00000482855 DNTTIP2Q5QJE6 756 aaKnown RBP13.54□□□□□ -0.24
RPGR-208ENST00000482855 MYRIPQ8NFW9 859 aa13.54□□□□□ -0.24
RPGR-208ENST00000482855 TMEM63CQ9P1W3 806 aa13.54□□□□□ -0.24
RPGR-208ENST00000482855 U2SURPO15042 1029 aaKnown RBP13.54□□□□□ -0.24
RPGR-208ENST00000482855 NWD1Q149M9 1564 aa13.53□□□□□ -0.24
RPGR-208ENST00000482855 QRICH2Q9H0J4 1663 aa13.53□□□□□ -0.24
RPGR-208ENST00000482855 KIF1BO60333 1816 aa13.53□□□□□ -0.24
RPGR-208ENST00000482855 C1orf115Q9H7X2 142 aa13.53□□□□□ -0.24
RPGR-208ENST00000482855 NSD2O96028 1365 aa13.52□□□□□ -0.24
RPGR-208ENST00000482855 ZSCAN20P17040 1043 aaPredicted RBP13.52□□□□□ -0.24
RPGR-208ENST00000482855 MLECQ14165 292 aa13.52□□□□□ -0.24
RPGR-208ENST00000482855 RNF214Q8ND24 703 aa13.52□□□□□ -0.24
RPGR-208ENST00000482855 PLEKHF1Q96S99 279 aa13.52□□□□□ -0.24
RPGR-208ENST00000482855 ZBTB7BO15156 539 aaPredicted RBP13.52□□□□□ -0.25
RPGR-208ENST00000482855 ST18O60284 1047 aa13.52□□□□□ -0.25
RPGR-208ENST00000482855 MBD3O95983 291 aa13.52□□□□□ -0.25
RPGR-208ENST00000482855 IFT172Q9UG01 1749 aa13.52□□□□□ -0.25
RPGR-208ENST00000482855 GGT6Q6P531 493 aa13.51□□□□□ -0.25
RPGR-208ENST00000482855 PRIMPOLQ96LW4 560 aa13.51□□□□□ -0.25
RPGR-208ENST00000482855 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.51□□□□□ -0.25
RPGR-208ENST00000482855 ZGPATQ8N5A5 531 aaKnown RBP13.51□□□□□ -0.25
RPGR-208ENST00000482855 GSPT1P15170 499 aaKnown RBP13.5□□□□□ -0.25
RPGR-208ENST00000482855 HMGN5P82970 282 aaKnown RBP13.5□□□□□ -0.25
RPGR-208ENST00000482855 SLC52A1Q9NWF4 448 aa13.5□□□□□ -0.25
RPGR-208ENST00000482855 TRAK1Q9UPV9 953 aa13.5□□□□□ -0.25
RPGR-208ENST00000482855 USP26Q9BXU7 913 aa13.5□□□□□ -0.25
RPGR-208ENST00000482855 ZDHHC9Q9Y397 364 aa13.5□□□□□ -0.25
RPGR-208ENST00000482855 TSPY26PQ9H489 355 aa13.49□□□□□ -0.25
RPGR-208ENST00000482855 NSFL1CQ9UNZ2 370 aaKnown RBP13.49□□□□□ -0.25
RPGR-208ENST00000482855 ZBTB7CA1YPR0 619 aa13.49□□□□□ -0.25
RPGR-208ENST00000482855 GTPBP4Q9BZE4 634 aaKnown RBP13.49□□□□□ -0.25
RPGR-208ENST00000482855 SETBP1Q9Y6X0 1596 aa13.49□□□□□ -0.25
RPGR-208ENST00000482855 MYO5BQ9ULV0 1848 aa13.49□□□□□ -0.25
RPGR-208ENST00000482855 INTS3Q68E01 1043 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms