RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 NME9Q86XW9 330 aa13.86□□□□□ -0.19
SPTLC1-206ENST00000482632 TRPC5Q9UL62 973 aaPredicted RBP13.86□□□□□ -0.19
SPTLC1-206ENST00000482632 KIF20BQ96Q89 1820 aa13.85□□□□□ -0.19
SPTLC1-206ENST00000482632 FAM83GA6ND36 823 aa13.85□□□□□ -0.19
SPTLC1-206ENST00000482632 FNBP4Q8N3X1 1017 aaPredicted RBP13.85□□□□□ -0.19
SPTLC1-206ENST00000482632 BTG4Q9NY30 223 aa13.85□□□□□ -0.19
SPTLC1-206ENST00000482632 ZRANB1Q9UGI0 708 aa13.85□□□□□ -0.19
SPTLC1-206ENST00000482632 USP19O94966 1318 aa13.85□□□□□ -0.19
SPTLC1-206ENST00000482632 ANKRD36BQ8N2N9 1353 aa13.84□□□□□ -0.19
SPTLC1-206ENST00000482632 SSH2Q76I76 1423 aa13.84□□□□□ -0.19
SPTLC1-206ENST00000482632 GCP02774 474 aa13.84□□□□□ -0.19
SPTLC1-206ENST00000482632 UNC5CLQ8IV45 518 aa13.84□□□□□ -0.19
SPTLC1-206ENST00000482632 SLIT2O94813 1529 aa13.84□□□□□ -0.19
SPTLC1-206ENST00000482632 NRAPQ86VF7 1730 aa13.84□□□□□ -0.19
SPTLC1-206ENST00000482632 BCL9LQ86UU0 1499 aa13.83□□□□□ -0.2
SPTLC1-206ENST00000482632 STRN4Q9NRL3 753 aa13.83□□□□□ -0.2
SPTLC1-206ENST00000482632 SLIT3O75094 1523 aa13.83□□□□□ -0.2
SPTLC1-206ENST00000482632 LTN1O94822 1766 aa13.82□□□□□ -0.2
SPTLC1-206ENST00000482632 RGPD5Q99666 1765 aa13.82□□□□□ -0.2
SPTLC1-206ENST00000482632 A0A0G2JS52 829 aa13.82□□□□□ -0.2
SPTLC1-206ENST00000482632 RBM6P78332 1123 aaKnown RBP13.82□□□□□ -0.2
SPTLC1-206ENST00000482632 MYT1Q01538 1121 aa13.82□□□□□ -0.2
SPTLC1-206ENST00000482632 ATRNO75882 1429 aa13.81□□□□□ -0.2
SPTLC1-206ENST00000482632 PITPNM1O00562 1244 aa13.81□□□□□ -0.2
SPTLC1-206ENST00000482632 EVA1CP58658 441 aa13.81□□□□□ -0.2
SPTLC1-206ENST00000482632 NSD3Q9BZ95 1437 aa13.81□□□□□ -0.2
SPTLC1-206ENST00000482632 USP54Q70EL1 1684 aa13.8□□□□□ -0.2
SPTLC1-206ENST00000482632 PIP4P2Q8N4L2 257 aa13.8□□□□□ -0.2
SPTLC1-206ENST00000482632 KCNH5Q8NCM2 988 aa13.8□□□□□ -0.2
SPTLC1-206ENST00000482632 COG3Q96JB2 828 aa13.8□□□□□ -0.2
SPTLC1-206ENST00000482632 RTN4Q9NQC3 1192 aaKnown RBP13.8□□□□□ -0.2
SPTLC1-206ENST00000482632 VASPP50552 380 aaPredicted RBP13.79□□□□□ -0.2
SPTLC1-206ENST00000482632 GJD4Q96KN9 370 aaPredicted RBP13.79□□□□□ -0.2
SPTLC1-206ENST00000482632 GGNBP2Q9H3C7 697 aa13.79□□□□□ -0.2
SPTLC1-206ENST00000482632 C11orf95C9JLR9 678 aaPredicted RBP13.78□□□□□ -0.2
SPTLC1-206ENST00000482632 CPDO75976 1380 aa13.78□□□□□ -0.2
SPTLC1-206ENST00000482632 RGS12O14924 1447 aa13.78□□□□□ -0.2
SPTLC1-206ENST00000482632 GLI3P10071 1580 aa13.78□□□□□ -0.2
SPTLC1-206ENST00000482632 NFAT5O94916 1531 aa13.77□□□□□ -0.21
SPTLC1-206ENST00000482632 VPS72Q15906 364 aa13.77□□□□□ -0.21
SPTLC1-206ENST00000482632 USP31Q70CQ4 1352 aa13.77□□□□□ -0.21
SPTLC1-206ENST00000482632 LMO7Q8WWI1 1683 aa13.77□□□□□ -0.21
SPTLC1-206ENST00000482632 USP35Q9P2H5 1018 aa13.77□□□□□ -0.21
SPTLC1-206ENST00000482632 CAMTA1Q9Y6Y1 1673 aa13.76□□□□□ -0.21
SPTLC1-206ENST00000482632 OVOS2A0A0J9YW53 1432 aa13.76□□□□□ -0.21
SPTLC1-206ENST00000482632 OVOS2Q6IE36 1432 aa13.76□□□□□ -0.21
SPTLC1-206ENST00000482632 KIF7Q2M1P5 1343 aa13.76□□□□□ -0.21
SPTLC1-206ENST00000482632 CSB-PGBD3P0DP91 1061 aa13.76□□□□□ -0.21
SPTLC1-206ENST00000482632 BRWD3Q6RI45 1802 aa13.76□□□□□ -0.21
SPTLC1-206ENST00000482632 COL18A1P39060 1754 aa13.76□□□□□ -0.21
SPTLC1-206ENST00000482632 CDK12Q9NYV4 1490 aaPredicted RBP13.75□□□□□ -0.21
SPTLC1-206ENST00000482632 CARD14Q9BXL6 1004 aa13.75□□□□□ -0.21
SPTLC1-206ENST00000482632 PANK3Q9H999 370 aa13.75□□□□□ -0.21
SPTLC1-206ENST00000482632 CGNL1Q0VF96 1302 aa13.74□□□□□ -0.21
SPTLC1-206ENST00000482632 FYB1O15117 783 aa13.74□□□□□ -0.21
SPTLC1-206ENST00000482632 FAM98CQ17RN3 349 aaKnown RBP13.74□□□□□ -0.21
SPTLC1-206ENST00000482632 ARHGEF25Q86VW2 580 aa13.74□□□□□ -0.21
SPTLC1-206ENST00000482632 ANKRD26Q9UPS8 1709 aa13.73□□□□□ -0.21
SPTLC1-206ENST00000482632 AATKQ6ZMQ8 1374 aa13.73□□□□□ -0.21
SPTLC1-206ENST00000482632 FXR2P51116 673 aaKnown RBP eCLIP13.73□□□□□ -0.21
SPTLC1-206ENST00000482632 LARP1Q6PKG0 1096 aaKnown RBP13.73□□□□□ -0.21
SPTLC1-206ENST00000482632 COL5A2P05997 1499 aaPredicted RBP13.73□□□□□ -0.21
SPTLC1-206ENST00000482632 SPATA31A5Q5VU36 1347 aa13.72□□□□□ -0.21
SPTLC1-206ENST00000482632 SPATA31A7Q8IWB4 1347 aa13.72□□□□□ -0.21
SPTLC1-206ENST00000482632 FBLN1P23142 703 aa13.72□□□□□ -0.21
SPTLC1-206ENST00000482632 AMPHP49418 695 aa13.72□□□□□ -0.21
SPTLC1-206ENST00000482632 CNGB1Q14028 1251 aaPredicted RBP13.72□□□□□ -0.21
SPTLC1-206ENST00000482632 TOM1L2Q6ZVM7 507 aa13.72□□□□□ -0.21
SPTLC1-206ENST00000482632 CCDC7Q96M83 1385 aa13.71□□□□□ -0.21
SPTLC1-206ENST00000482632 TNNT2P45379 298 aaPredicted RBP13.71□□□□□ -0.21
SPTLC1-206ENST00000482632 RRS1Q15050 365 aaKnown RBP13.71□□□□□ -0.21
SPTLC1-206ENST00000482632 SEPT12Q8IYM1 358 aa13.71□□□□□ -0.21
SPTLC1-206ENST00000482632 LTV1Q96GA3 475 aaPredicted RBP13.71□□□□□ -0.21
SPTLC1-206ENST00000482632 AXIN2Q9Y2T1 843 aa13.71□□□□□ -0.21
SPTLC1-206ENST00000482632 KNSTRNQ9Y448 316 aa13.71□□□□□ -0.21
SPTLC1-206ENST00000482632 MAP2P11137 1827 aaKnown RBP13.71□□□□□ -0.22
SPTLC1-206ENST00000482632 SPATA31A1Q5TZJ5 1347 aa13.69□□□□□ -0.22
SPTLC1-206ENST00000482632 WASHC2AQ641Q2 1341 aa13.69□□□□□ -0.22
SPTLC1-206ENST00000482632 PPM1GO15355 546 aaPredicted RBP13.69□□□□□ -0.22
SPTLC1-206ENST00000482632 ZEB1P37275 1124 aaPredicted RBP13.69□□□□□ -0.22
SPTLC1-206ENST00000482632 CRB1P82279 1406 aa13.69□□□□□ -0.22
SPTLC1-206ENST00000482632 ABCC6O95255 1503 aa13.69□□□□□ -0.22
SPTLC1-206ENST00000482632 WNK3Q9BYP7 1800 aa13.69□□□□□ -0.22
SPTLC1-206ENST00000482632 MAP3K19Q56UN5 1328 aa13.68□□□□□ -0.22
SPTLC1-206ENST00000482632 TCP11L2Q8N4U5 519 aa13.68□□□□□ -0.22
SPTLC1-206ENST00000482632 NLRP2Q9NX02 1062 aa13.68□□□□□ -0.22
SPTLC1-206ENST00000482632 EP400Q96L91 3159 aa13.68□□□□□ -0.22
SPTLC1-206ENST00000482632 RGPD2P0DJD1 1756 aa13.68□□□□□ -0.22
SPTLC1-206ENST00000482632 WDR17Q8IZU2 1322 aa13.67□□□□□ -0.22
SPTLC1-206ENST00000482632 ANKRD24Q8TF21 1146 aa13.67□□□□□ -0.22
SPTLC1-206ENST00000482632 THSD7AQ9UPZ6 1657 aa13.66□□□□□ -0.22
SPTLC1-206ENST00000482632 KRT27Q7Z3Y8 459 aa13.66□□□□□ -0.22
SPTLC1-206ENST00000482632 IP6K1Q92551 441 aa13.66□□□□□ -0.22
SPTLC1-206ENST00000482632 FAM208AQ9UK61 1670 aaKnown RBP13.66□□□□□ -0.22
SPTLC1-206ENST00000482632 BLMP54132 1417 aaPredicted RBP13.65□□□□□ -0.22
SPTLC1-206ENST00000482632 PEAK1Q9H792 1746 aa13.65□□□□□ -0.22
SPTLC1-206ENST00000482632 HOXC9P31274 260 aa13.65□□□□□ -0.22
SPTLC1-206ENST00000482632 MORC1Q86VD1 984 aa13.65□□□□□ -0.22
SPTLC1-206ENST00000482632 SMG6Q86US8 1419 aaKnown RBP13.64□□□□□ -0.23
SPTLC1-206ENST00000482632 NSD2O96028 1365 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms