RNA–Protein interactions for RNA: ENST00000482270.5

LIMK2-209, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-209ENST00000482270 ARHGEF5Q12774 1597 aa13.98□□□□□ -0.17
LIMK2-209ENST00000482270 ESF1Q9H501 851 aaKnown RBP13.98□□□□□ -0.17
LIMK2-209ENST00000482270 KCNC4Q03721 635 aa13.97□□□□□ -0.17
LIMK2-209ENST00000482270 TJAP1Q5JTD0 557 aa13.97□□□□□ -0.17
LIMK2-209ENST00000482270 STRCQ7RTU9 1775 aa13.96□□□□□ -0.17
LIMK2-209ENST00000482270 IL21Q9HBE4 155 aa13.96□□□□□ -0.17
LIMK2-209ENST00000482270 GPBP1L1Q9HC44 474 aaPredicted RBP13.96□□□□□ -0.17
LIMK2-209ENST00000482270 TLL1O43897 1013 aa13.95□□□□□ -0.18
LIMK2-209ENST00000482270 ITGBL1O95965 494 aaPredicted RBP13.95□□□□□ -0.18
LIMK2-209ENST00000482270 CROCC2H7BZ55 1655 aa13.95□□□□□ -0.18
LIMK2-209ENST00000482270 RTEL1-TNFRSF6BF6WH68 1400 aa13.94□□□□□ -0.18
LIMK2-209ENST00000482270 MS4A1P11836 297 aa13.94□□□□□ -0.18
LIMK2-209ENST00000482270 MYOM3Q5VTT5 1437 aa13.94□□□□□ -0.18
LIMK2-209ENST00000482270 UHRF1BP1Q6BDS2 1440 aa13.94□□□□□ -0.18
LIMK2-209ENST00000482270 GGT6Q6P531 493 aa13.94□□□□□ -0.18
LIMK2-209ENST00000482270 CNTLNQ9NXG0 1405 aa13.94□□□□□ -0.18
LIMK2-209ENST00000482270 HLA-CQ95604 372 aa13.93□□□□□ -0.18
LIMK2-209ENST00000482270 MYO3AQ8NEV4 1616 aa13.93□□□□□ -0.18
LIMK2-209ENST00000482270 PTPN23Q9H3S7 1636 aa13.93□□□□□ -0.18
LIMK2-209ENST00000482270 KDM4AO75164 1064 aa13.92□□□□□ -0.18
LIMK2-209ENST00000482270 NKX2-3Q8TAU0 364 aa13.92□□□□□ -0.18
LIMK2-209ENST00000482270 BEGAINQ9BUH8 593 aa13.92□□□□□ -0.18
LIMK2-209ENST00000482270 MAST1Q9Y2H9 1570 aa13.92□□□□□ -0.18
LIMK2-209ENST00000482270 NUTM1Q86Y26 1132 aa13.91□□□□□ -0.18
LIMK2-209ENST00000482270 ZMYM3Q14202 1370 aa13.9□□□□□ -0.18
LIMK2-209ENST00000482270 DHX29Q7Z478 1369 aaKnown RBP13.9□□□□□ -0.18
LIMK2-209ENST00000482270 ZNF142P52746 1687 aaPredicted RBP13.89□□□□□ -0.19
LIMK2-209ENST00000482270 ZPR1O75312 459 aa13.89□□□□□ -0.19
LIMK2-209ENST00000482270 ATP6V1AP38606 617 aa13.89□□□□□ -0.19
LIMK2-209ENST00000482270 GUCA2AQ02747 115 aa13.89□□□□□ -0.19
LIMK2-209ENST00000482270 MIA2Q96PC5 1412 aa13.89□□□□□ -0.19
LIMK2-209ENST00000482270 CEP152O94986 1710 aa13.88□□□□□ -0.19
LIMK2-209ENST00000482270 KIF3BO15066 747 aa13.88□□□□□ -0.19
LIMK2-209ENST00000482270 NR1I2O75469 434 aa13.88□□□□□ -0.19
LIMK2-209ENST00000482270 CFAP65Q6ZU64 1925 aaKnown RBP13.88□□□□□ -0.19
LIMK2-209ENST00000482270 KDM5DQ9BY66 1539 aa13.87□□□□□ -0.19
LIMK2-209ENST00000482270 TSPY4P0CV99 314 aa13.87□□□□□ -0.19
LIMK2-209ENST00000482270 TSPY10P0CW01 314 aa13.87□□□□□ -0.19
LIMK2-209ENST00000482270 MORN1Q5T089 497 aa13.87□□□□□ -0.19
LIMK2-209ENST00000482270 DNMT1P26358 1616 aaKnown RBP13.86□□□□□ -0.19
LIMK2-209ENST00000482270 RNF17Q9BXT8 1623 aaKnown RBP13.86□□□□□ -0.19
LIMK2-209ENST00000482270 NEUROD2Q15784 382 aa13.86□□□□□ -0.19
LIMK2-209ENST00000482270 SLC27A5Q9Y2P5 690 aa13.86□□□□□ -0.19
LIMK2-209ENST00000482270 NPATQ14207 1427 aa13.86□□□□□ -0.19
LIMK2-209ENST00000482270 PTPRKQ15262 1439 aa13.86□□□□□ -0.19
LIMK2-209ENST00000482270 CAMSAP1Q5T5Y3 1602 aa13.86□□□□□ -0.19
LIMK2-209ENST00000482270 EIF2AK4Q9P2K8 1649 aaKnown RBP13.86□□□□□ -0.19
LIMK2-209ENST00000482270 CEP170BQ9Y4F5 1589 aaPredicted RBP13.85□□□□□ -0.19
LIMK2-209ENST00000482270 SCUBE3Q8IX30 993 aa13.85□□□□□ -0.19
LIMK2-209ENST00000482270 KDM4CQ9H3R0 1056 aa13.85□□□□□ -0.19
LIMK2-209ENST00000482270 FGD6Q6ZV73 1430 aa13.84□□□□□ -0.19
LIMK2-209ENST00000482270 HOXA2O43364 376 aa13.84□□□□□ -0.19
LIMK2-209ENST00000482270 GRIPAP1Q4V328 841 aa13.84□□□□□ -0.19
LIMK2-209ENST00000482270 SPIRE2Q8WWL2 714 aa13.84□□□□□ -0.19
LIMK2-209ENST00000482270 MROH1Q8NDA8 1641 aa13.83□□□□□ -0.2
LIMK2-209ENST00000482270 ZC3H13Q5T200 1668 aaKnown RBP13.83□□□□□ -0.2
LIMK2-209ENST00000482270 ABCC5O15440 1437 aa13.81□□□□□ -0.2
LIMK2-209ENST00000482270 DAPK1P53355 1430 aa13.81□□□□□ -0.2
LIMK2-209ENST00000482270 TCOF1Q13428 1488 aaKnown RBP13.81□□□□□ -0.2
LIMK2-209ENST00000482270 NDUFV2P19404 249 aa13.81□□□□□ -0.2
LIMK2-209ENST00000482270 RNF19BQ6ZMZ0 732 aa13.81□□□□□ -0.2
LIMK2-209ENST00000482270 NCOA1Q15788 1441 aa13.81□□□□□ -0.2
LIMK2-209ENST00000482270 SHANK2Q9UPX8 1470 aa13.8□□□□□ -0.2
LIMK2-209ENST00000482270 ABCC3O15438 1527 aa13.8□□□□□ -0.2
LIMK2-209ENST00000482270 DUOX2Q9NRD8 1548 aa13.8□□□□□ -0.2
LIMK2-209ENST00000482270 FAM135AQ9P2D6 1515 aa13.8□□□□□ -0.2
LIMK2-209ENST00000482270 A0A0G2JS52 829 aa13.8□□□□□ -0.2
LIMK2-209ENST00000482270 USP46P62068 366 aa13.8□□□□□ -0.2
LIMK2-209ENST00000482270 TBC1D2Q9BYX2 928 aa13.8□□□□□ -0.2
LIMK2-209ENST00000482270 POLR1AO95602 1720 aaPredicted RBP13.8□□□□□ -0.2
LIMK2-209ENST00000482270 WASHC2CQ9Y4E1 1318 aa13.8□□□□□ -0.2
LIMK2-209ENST00000482270 PZPP20742 1482 aa13.8□□□□□ -0.2
LIMK2-209ENST00000482270 MOXD2PA6NHM9 499 aa13.79□□□□□ -0.2
LIMK2-209ENST00000482270 FBXO31Q5XUX0 539 aaPredicted RBP13.79□□□□□ -0.2
LIMK2-209ENST00000482270 SPSB2Q99619 263 aa13.78□□□□□ -0.2
LIMK2-209ENST00000482270 KIF15Q9NS87 1388 aa13.78□□□□□ -0.2
LIMK2-209ENST00000482270 ADH1BP00325 375 aa13.77□□□□□ -0.21
LIMK2-209ENST00000482270 IFFO2Q5TF58 517 aa13.77□□□□□ -0.21
LIMK2-209ENST00000482270 FAM117AQ9C073 453 aa13.77□□□□□ -0.21
LIMK2-209ENST00000482270 RRP7BPQ9NSQ0 103 aa13.77□□□□□ -0.21
LIMK2-209ENST00000482270 CHIC2Q9UKJ5 165 aa13.77□□□□□ -0.21
LIMK2-209ENST00000482270 DEPDC5O75140 1603 aa13.76□□□□□ -0.21
LIMK2-209ENST00000482270 A2ML1A8K2U0 1454 aa13.76□□□□□ -0.21
LIMK2-209ENST00000482270 TNRQ92752 1358 aa13.76□□□□□ -0.21
LIMK2-209ENST00000482270 S1PR4O95977 384 aa13.76□□□□□ -0.21
LIMK2-209ENST00000482270 FDX1P10109 184 aa13.76□□□□□ -0.21
LIMK2-209ENST00000482270 CSPP1Q1MSJ5 1256 aa13.76□□□□□ -0.21
LIMK2-209ENST00000482270 PPP1R18Q6NYC8 613 aa13.76□□□□□ -0.21
LIMK2-209ENST00000482270 FBXO41Q8TF61 875 aa13.76□□□□□ -0.21
LIMK2-209ENST00000482270 SYMPKQ92797 1274 aaKnown RBP13.76□□□□□ -0.21
LIMK2-209ENST00000482270 PRDM15P57071 1507 aaPredicted RBP13.75□□□□□ -0.21
LIMK2-209ENST00000482270 PTPRTO14522 1441 aa13.75□□□□□ -0.21
LIMK2-209ENST00000482270 FMNL1O95466 1100 aaPredicted RBP13.75□□□□□ -0.21
LIMK2-209ENST00000482270 BRPF1P55201 1214 aaPredicted RBP13.75□□□□□ -0.21
LIMK2-209ENST00000482270 PPARGC1BQ86YN6 1023 aaKnown RBP13.75□□□□□ -0.21
LIMK2-209ENST00000482270 FAM50AQ14320 339 aaKnown RBP13.74□□□□□ -0.21
LIMK2-209ENST00000482270 PRDM9Q9NQV7 894 aa13.74□□□□□ -0.21
LIMK2-209ENST00000482270 ERBINQ96RT1 1412 aa13.73□□□□□ -0.21
LIMK2-209ENST00000482270 SPATA31D1Q6ZQQ2 1576 aa13.73□□□□□ -0.21
LIMK2-209ENST00000482270 PLA2R1Q13018 1463 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms