RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 GTPBP6O43824 516 aaPredicted RBP6.11□□□□□ -1.43
VPS13D-208ENST00000481484 RGS12O14924 1447 aa6.1□□□□□ -1.43
VPS13D-208ENST00000481484 ARHGEF10O15013 1369 aa6.1□□□□□ -1.43
VPS13D-208ENST00000481484 DHX57Q6P158 1386 aaKnown RBP6.1□□□□□ -1.43
VPS13D-208ENST00000481484 AFF2P51816 1311 aa6.1□□□□□ -1.43
VPS13D-208ENST00000481484 C2orf72A6NCS6 295 aa6.1□□□□□ -1.43
VPS13D-208ENST00000481484 HRCP23327 699 aa6.1□□□□□ -1.43
VPS13D-208ENST00000481484 POTEAQ6S8J7 498 aa6.1□□□□□ -1.43
VPS13D-208ENST00000481484 SIRT1Q96EB6 747 aa6.1□□□□□ -1.43
VPS13D-208ENST00000481484 NRAPQ86VF7 1730 aa6.1□□□□□ -1.43
VPS13D-208ENST00000481484 ATP7BP35670 1465 aa6.09□□□□□ -1.43
VPS13D-208ENST00000481484 ATRNO75882 1429 aa6.09□□□□□ -1.43
VPS13D-208ENST00000481484 COL14A1Q05707 1796 aaKnown RBP6.09□□□□□ -1.43
VPS13D-208ENST00000481484 ADGRF5Q8IZF2 1346 aa6.09□□□□□ -1.43
VPS13D-208ENST00000481484 HOXB1P14653 301 aaPredicted RBP6.09□□□□□ -1.43
VPS13D-208ENST00000481484 MARVELD3Q96A59 401 aa6.09□□□□□ -1.43
VPS13D-208ENST00000481484 ZSWIM6Q9HCJ5 1215 aa6.09□□□□□ -1.43
VPS13D-208ENST00000481484 SBNO1A3KN83 1393 aa6.08□□□□□ -1.44
VPS13D-208ENST00000481484 ATAD2Q6PL18 1390 aa6.08□□□□□ -1.44
VPS13D-208ENST00000481484 QRICH2Q9H0J4 1663 aa6.08□□□□□ -1.44
VPS13D-208ENST00000481484 PHRF1Q9P1Y6 1649 aaKnown RBP6.08□□□□□ -1.44
VPS13D-208ENST00000481484 RIMBP2O15034 1052 aa6.08□□□□□ -1.44
VPS13D-208ENST00000481484 RXRBP28702 533 aa6.08□□□□□ -1.44
VPS13D-208ENST00000481484 ZNF710Q8N1W2 664 aa6.08□□□□□ -1.44
VPS13D-208ENST00000481484 NGLY1Q96IV0 654 aa6.08□□□□□ -1.44
VPS13D-208ENST00000481484 RBM6P78332 1123 aaKnown RBP6.07□□□□□ -1.44
VPS13D-208ENST00000481484 GPR153Q6NV75 609 aa6.07□□□□□ -1.44
VPS13D-208ENST00000481484 TMC2Q8TDI7 906 aa6.07□□□□□ -1.44
VPS13D-208ENST00000481484 C14orf93Q9H972 538 aaKnown RBP6.07□□□□□ -1.44
VPS13D-208ENST00000481484 SLIT2O94813 1529 aa6.07□□□□□ -1.44
VPS13D-208ENST00000481484 SRCAPQ6ZRS2 3230 aa6.06□□□□□ -1.44
VPS13D-208ENST00000481484 RGPD1P0DJD0 1748 aa6.06□□□□□ -1.44
VPS13D-208ENST00000481484 NUTM2BA6NNL0 878 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-208ENST00000481484 NUTM2EB1AL46 878 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-208ENST00000481484 SLC34A2O95436 690 aa6.06□□□□□ -1.44
VPS13D-208ENST00000481484 RGL3Q3MIN7 710 aa6.06□□□□□ -1.44
VPS13D-208ENST00000481484 NUTM2AQ8IVF1 878 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-208ENST00000481484 CDAN1Q8IWY9 1227 aa6.06□□□□□ -1.44
VPS13D-208ENST00000481484 C8orf37Q96NL8 207 aa6.06□□□□□ -1.44
VPS13D-208ENST00000481484 TRPC5Q9UL62 973 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-208ENST00000481484 BRWD3Q6RI45 1802 aa6.06□□□□□ -1.44
VPS13D-208ENST00000481484 GLI3P10071 1580 aa6.06□□□□□ -1.44
VPS13D-208ENST00000481484 PLEKHH1Q9ULM0 1364 aa6.06□□□□□ -1.44
VPS13D-208ENST00000481484 SPATA31A3Q5VYP0 1347 aa6.05□□□□□ -1.44
VPS13D-208ENST00000481484 POTEB3A0JP26 581 aa6.05□□□□□ -1.44
VPS13D-208ENST00000481484 EMP3P54852 163 aa6.05□□□□□ -1.44
VPS13D-208ENST00000481484 FOXK1P85037 733 aa6.05□□□□□ -1.44
VPS13D-208ENST00000481484 PSME1Q06323 249 aa6.05□□□□□ -1.44
VPS13D-208ENST00000481484 ESCO1Q5FWF5 840 aa6.05□□□□□ -1.44
VPS13D-208ENST00000481484 POTEBQ6S5H4 581 aa6.05□□□□□ -1.44
VPS13D-208ENST00000481484 FNBP4Q8N3X1 1017 aaPredicted RBP6.05□□□□□ -1.44
VPS13D-208ENST00000481484 BBXQ8WY36 941 aaPredicted RBP6.05□□□□□ -1.44
VPS13D-208ENST00000481484 ORAI2Q96SN7 254 aa6.05□□□□□ -1.44
VPS13D-208ENST00000481484 GPHNQ9NQX3 736 aaPredicted RBP6.05□□□□□ -1.44
VPS13D-208ENST00000481484 TRPM1Q7Z4N2 1603 aa6.05□□□□□ -1.44
VPS13D-208ENST00000481484 BCL9LQ86UU0 1499 aa6.04□□□□□ -1.44
VPS13D-208ENST00000481484 STK26Q9P289 416 aa6.04□□□□□ -1.44
VPS13D-208ENST00000481484 NRKQ7Z2Y5 1582 aa6.04□□□□□ -1.44
VPS13D-208ENST00000481484 GPRASP1Q5JY77 1395 aa6.04□□□□□ -1.44
VPS13D-208ENST00000481484 THSD7AQ9UPZ6 1657 aa6.04□□□□□ -1.44
VPS13D-208ENST00000481484 WNK3Q9BYP7 1800 aa6.04□□□□□ -1.44
VPS13D-208ENST00000481484 RALGAPBQ86X10 1494 aa6.03□□□□□ -1.44
VPS13D-208ENST00000481484 FAM205CA6NFA0 338 aa6.03□□□□□ -1.44
VPS13D-208ENST00000481484 PRAM1Q96QH2 718 aa6.03□□□□□ -1.44
VPS13D-208ENST00000481484 HS3ST6Q96QI5 342 aa6.03□□□□□ -1.44
VPS13D-208ENST00000481484 POGKQ9P215 609 aa6.03□□□□□ -1.44
VPS13D-208ENST00000481484 USP21Q9UK80 565 aa6.03□□□□□ -1.44
VPS13D-208ENST00000481484 USP54Q70EL1 1684 aa6.03□□□□□ -1.44
VPS13D-208ENST00000481484 ABCC6O95255 1503 aa6.03□□□□□ -1.44
VPS13D-208ENST00000481484 BRD4O60885 1362 aaPredicted RBP6.03□□□□□ -1.44
VPS13D-208ENST00000481484 AKAP12Q02952 1782 aa6.03□□□□□ -1.44
VPS13D-208ENST00000481484 FOXO3O43524 673 aa6.02□□□□□ -1.45
VPS13D-208ENST00000481484 ADAMTS2O95450 1211 aa6.02□□□□□ -1.45
VPS13D-208ENST00000481484 DSG2Q14126 1118 aa6.02□□□□□ -1.45
VPS13D-208ENST00000481484 ARSIQ5FYB1 569 aa6.02□□□□□ -1.45
VPS13D-208ENST00000481484 CFAP70Q5T0N1 1121 aa6.02□□□□□ -1.45
VPS13D-208ENST00000481484 TMEM132EQ6IEE7 984 aa6.02□□□□□ -1.45
VPS13D-208ENST00000481484 WAPLQ7Z5K2 1190 aa6.02□□□□□ -1.45
VPS13D-208ENST00000481484 DDX17Q92841 729 aaKnown RBP6.02□□□□□ -1.45
VPS13D-208ENST00000481484 UPF1Q92900 1129 aaKnown RBP eCLIP6.02□□□□□ -1.45
VPS13D-208ENST00000481484 CRISPLD2Q9H0B8 497 aa6.02□□□□□ -1.45
VPS13D-208ENST00000481484 QTRT2Q9H974 415 aaKnown RBP6.02□□□□□ -1.45
VPS13D-208ENST00000481484 RGPD3A6NKT7 1758 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-208ENST00000481484 RGPD4Q7Z3J3 1758 aa6.02□□□□□ -1.45
VPS13D-208ENST00000481484 LRP5O75197 1615 aa6.02□□□□□ -1.45
VPS13D-208ENST00000481484 TNS1Q9HBL0 1735 aaKnown RBP6.02□□□□□ -1.45
VPS13D-208ENST00000481484 LMO7Q8WWI1 1683 aa6.01□□□□□ -1.45
VPS13D-208ENST00000481484 BLMP54132 1417 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-208ENST00000481484 HAP1P54257 671 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-208ENST00000481484 CCDC125Q86Z20 511 aa6.01□□□□□ -1.45
VPS13D-208ENST00000481484 UNC5CLQ8IV45 518 aa6.01□□□□□ -1.45
VPS13D-208ENST00000481484 PLPP6Q8IY26 295 aa6.01□□□□□ -1.45
VPS13D-208ENST00000481484 MON2Q7Z3U7 1717 aa6.01□□□□□ -1.45
VPS13D-208ENST00000481484 PARP4Q9UKK3 1724 aaKnown RBP6.01□□□□□ -1.45
VPS13D-208ENST00000481484 POLR3AO14802 1390 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-208ENST00000481484 PDE4AP27815 886 aa6□□□□□ -1.45
VPS13D-208ENST00000481484 KRT28Q7Z3Y7 464 aa6□□□□□ -1.45
VPS13D-208ENST00000481484 DCAF11Q8TEB1 546 aa6□□□□□ -1.45
VPS13D-208ENST00000481484 PTCD2Q8WV60 388 aaKnown RBP6□□□□□ -1.45
VPS13D-208ENST00000481484 ERBB3P21860 1342 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms