RNA–Protein interactions for RNA: ENST00000480747.1

CKAP2-206, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 4

Gene CKAP2, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-206ENST00000480747 LMOD1P29536 600 aaPredicted RBP9.95□□□□□ -0.82
CKAP2-206ENST00000480747 AVPP01185 164 aa9.94□□□□□ -0.82
CKAP2-206ENST00000480747 CRIPAKQ8N1N5 446 aa9.94□□□□□ -0.82
CKAP2-206ENST00000480747 TSC1Q92574 1164 aa9.94□□□□□ -0.82
CKAP2-206ENST00000480747 TFIP11Q9UBB9 837 aaKnown RBP9.94□□□□□ -0.82
CKAP2-206ENST00000480747 TMEM88BA6NKF7 163 aa9.93□□□□□ -0.82
CKAP2-206ENST00000480747 PATL2C9JE40 543 aaKnown RBP9.93□□□□□ -0.82
CKAP2-206ENST00000480747 CDCA8Q53HL2 280 aa9.93□□□□□ -0.82
CKAP2-206ENST00000480747 ST8SIA5O15466 376 aa9.92□□□□□ -0.82
CKAP2-206ENST00000480747 F12P00748 615 aaPredicted RBP9.92□□□□□ -0.82
CKAP2-206ENST00000480747 SMPD1P17405 629 aa9.92□□□□□ -0.82
CKAP2-206ENST00000480747 CTHP32929 405 aa9.92□□□□□ -0.82
CKAP2-206ENST00000480747 SH3BP2P78314 561 aa9.92□□□□□ -0.82
CKAP2-206ENST00000480747 EHBP1Q8NDI1 1231 aa9.92□□□□□ -0.82
CKAP2-206ENST00000480747 HELBQ8NG08 1087 aaPredicted RBP9.92□□□□□ -0.82
CKAP2-206ENST00000480747 AAASQ9NRG9 546 aa9.92□□□□□ -0.82
CKAP2-206ENST00000480747 IVNS1ABPQ9Y6Y0 642 aa9.92□□□□□ -0.82
CKAP2-206ENST00000480747 CTC1Q2NKJ3 1217 aa9.91□□□□□ -0.82
CKAP2-206ENST00000480747 LINC01559Q495D7 138 aa9.91□□□□□ -0.82
CKAP2-206ENST00000480747 ZNF787Q6DD87 383 aa9.9□□□□□ -0.82
CKAP2-206ENST00000480747 ZNF511Q8NB15 262 aa9.9□□□□□ -0.82
CKAP2-206ENST00000480747 BAP1Q92560 729 aa9.9□□□□□ -0.82
CKAP2-206ENST00000480747 MAP10Q9P2G4 905 aa9.9□□□□□ -0.82
CKAP2-206ENST00000480747 MAFBQ9Y5Q3 323 aaPredicted RBP9.9□□□□□ -0.82
CKAP2-206ENST00000480747 J3QL48 77 aa9.89□□□□□ -0.83
CKAP2-206ENST00000480747 PER1O15534 1290 aaPredicted RBP9.89□□□□□ -0.83
CKAP2-206ENST00000480747 NR6A1Q15406 480 aa9.89□□□□□ -0.83
CKAP2-206ENST00000480747 TBC1D9Q6ZT07 1266 aa9.89□□□□□ -0.83
CKAP2-206ENST00000480747 ATG7O95352 703 aa9.88□□□□□ -0.83
CKAP2-206ENST00000480747 SMCPP49901 116 aaPredicted RBP9.88□□□□□ -0.83
CKAP2-206ENST00000480747 AXIN1O15169 862 aa9.87□□□□□ -0.83
CKAP2-206ENST00000480747 SIAH2O43255 324 aa9.87□□□□□ -0.83
CKAP2-206ENST00000480747 VRTNQ9H8Y1 702 aa9.87□□□□□ -0.83
CKAP2-206ENST00000480747 ALDH1A1P00352 501 aa9.86□□□□□ -0.83
CKAP2-206ENST00000480747 SND1Q7KZF4 910 aaKnown RBP eCLIP9.85□□□□□ -0.83
CKAP2-206ENST00000480747 VARSP26640 1264 aaKnown RBP9.84□□□□□ -0.83
CKAP2-206ENST00000480747 SOX11P35716 441 aa9.84□□□□□ -0.83
CKAP2-206ENST00000480747 HPS1Q92902 700 aa9.84□□□□□ -0.83
CKAP2-206ENST00000480747 SEMA3FQ13275 785 aa9.83□□□□□ -0.84
CKAP2-206ENST00000480747 CCDC27Q2M243 656 aa9.83□□□□□ -0.84
CKAP2-206ENST00000480747 ATP9BO43861 1147 aa9.82□□□□□ -0.84
CKAP2-206ENST00000480747 ARMC2Q8NEN0 867 aa9.82□□□□□ -0.84
CKAP2-206ENST00000480747 TLL2Q9Y6L7 1015 aa9.82□□□□□ -0.84
CKAP2-206ENST00000480747 WASF2Q9Y6W5 498 aa9.82□□□□□ -0.84
CKAP2-206ENST00000480747 POTECB2RU33 542 aa9.81□□□□□ -0.84
CKAP2-206ENST00000480747 PIK3CDO00329 1044 aa9.81□□□□□ -0.84
CKAP2-206ENST00000480747 IGSF3O75054 1194 aa9.81□□□□□ -0.84
CKAP2-206ENST00000480747 KANK4Q5T7N3 995 aaPredicted RBP9.81□□□□□ -0.84
CKAP2-206ENST00000480747 MPNDQ8N594 471 aa9.81□□□□□ -0.84
CKAP2-206ENST00000480747 DACH1Q9UI36 760 aa9.81□□□□□ -0.84
CKAP2-206ENST00000480747 ZMIZ1Q9ULJ6 1067 aa9.81□□□□□ -0.84
CKAP2-206ENST00000480747 FAM174AQ8TBP5 190 aa9.8□□□□□ -0.84
CKAP2-206ENST00000480747 FOXJ1Q92949 421 aa9.8□□□□□ -0.84
CKAP2-206ENST00000480747 NBPF14Q5TI25 921 aa9.79□□□□□ -0.84
CKAP2-206ENST00000480747 STK32AQ8WU08 396 aa9.79□□□□□ -0.84
CKAP2-206ENST00000480747 LOC105371045A0A1W2PR82 267 aa9.78□□□□□ -0.84
CKAP2-206ENST00000480747 TMEM164Q5U3C3 297 aa9.78□□□□□ -0.84
CKAP2-206ENST00000480747 BPHLQ86WA6 291 aaPredicted RBP9.78□□□□□ -0.84
CKAP2-206ENST00000480747 GNEQ9Y223 722 aaKnown RBP9.78□□□□□ -0.84
CKAP2-206ENST00000480747 E9PSI1 815 aa9.77□□□□□ -0.85
CKAP2-206ENST00000480747 FBXO45P0C2W1 286 aa9.77□□□□□ -0.85
CKAP2-206ENST00000480747 AGERQ15109 404 aa9.77□□□□□ -0.85
CKAP2-206ENST00000480747 ATP13A2Q9NQ11 1180 aa9.77□□□□□ -0.85
CKAP2-206ENST00000480747 GMPR2Q9P2T1 348 aaKnown RBP9.77□□□□□ -0.85
CKAP2-206ENST00000480747 EIF4G2P78344 907 aaKnown RBP eCLIP9.76□□□□□ -0.85
CKAP2-206ENST00000480747 C4orf48Q5BLP8 95 aa9.76□□□□□ -0.85
CKAP2-206ENST00000480747 PHLDB3Q6NSJ2 640 aa9.76□□□□□ -0.85
CKAP2-206ENST00000480747 GPKOWQ92917 476 aaPredicted RBP eCLIP9.76□□□□□ -0.853e-11■□□□□ 10.3
CKAP2-206ENST00000480747 AMOTL2Q9Y2J4 779 aa9.76□□□□□ -0.85
CKAP2-206ENST00000480747 NR1H3Q13133 447 aa9.75□□□□□ -0.85
CKAP2-206ENST00000480747 ADH1CP00326 375 aa9.74□□□□□ -0.85
CKAP2-206ENST00000480747 NNTQ13423 1086 aa9.74□□□□□ -0.85
CKAP2-206ENST00000480747 ELOAQ14241 798 aaKnown RBP9.74□□□□□ -0.85
CKAP2-206ENST00000480747 SH3BP5LQ7L8J4 393 aa9.74□□□□□ -0.85
CKAP2-206ENST00000480747 SH3RF1Q7Z6J0 888 aa9.74□□□□□ -0.85
CKAP2-206ENST00000480747 CDK15Q96Q40 435 aa9.74□□□□□ -0.85
CKAP2-206ENST00000480747 SLAIN2Q9P270 581 aa9.74□□□□□ -0.85
CKAP2-206ENST00000480747 ZNF775Q96BV0 537 aaPredicted RBP9.73□□□□□ -0.85
CKAP2-206ENST00000480747 C1QTNF2Q9BXJ5 285 aa9.73□□□□□ -0.85
CKAP2-206ENST00000480747 USP17L3A6NCW0 530 aa9.72□□□□□ -0.85
CKAP2-206ENST00000480747 USP17L4A6NCW7 530 aa9.72□□□□□ -0.85
CKAP2-206ENST00000480747 UNCXA6NJT0 531 aa9.72□□□□□ -0.85
CKAP2-206ENST00000480747 C11orf95C9JLR9 678 aaPredicted RBP9.72□□□□□ -0.85
CKAP2-206ENST00000480747 CAPN5O15484 640 aaPredicted RBP9.72□□□□□ -0.85
CKAP2-206ENST00000480747 ARID5BQ14865 1188 aa9.72□□□□□ -0.85
CKAP2-206ENST00000480747 USP17L2Q6R6M4 530 aa9.72□□□□□ -0.85
CKAP2-206ENST00000480747 USP17L1Q7RTZ2 530 aa9.72□□□□□ -0.85
CKAP2-206ENST00000480747 TXNDC2Q86VQ3 553 aa9.72□□□□□ -0.85
CKAP2-206ENST00000480747 PNMA1Q8ND90 353 aa9.72□□□□□ -0.85
CKAP2-206ENST00000480747 SENP2Q9HC62 589 aa9.72□□□□□ -0.85
CKAP2-206ENST00000480747 NOVA2Q9UNW9 492 aaKnown RBP9.72□□□□□ -0.85
CKAP2-206ENST00000480747 FKBPLQ9UIM3 349 aa9.71□□□□□ -0.86
CKAP2-206ENST00000480747 ZC3H4Q9UPT8 1303 aaKnown RBP9.71□□□□□ -0.86
CKAP2-206ENST00000480747 MAGEB6P1A0A0J9YX57 407 aa9.7□□□□□ -0.86
CKAP2-206ENST00000480747 ZBBXA8MT70 800 aa9.7□□□□□ -0.86
CKAP2-206ENST00000480747 USP17L5A8MUK1 530 aa9.7□□□□□ -0.86
CKAP2-206ENST00000480747 TRMT44Q8IYL2 757 aaKnown RBP9.7□□□□□ -0.86
CKAP2-206ENST00000480747 DEPDC4Q8N2C3 294 aa9.7□□□□□ -0.86
CKAP2-206ENST00000480747 TRIM47Q96LD4 638 aa9.7□□□□□ -0.86
CKAP2-206ENST00000480747 NR5A1Q13285 461 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms