RNA–Protein interactions for RNA: ENST00000480548.5

SGIP1-209, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 5

Gene SGIP1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-209ENST00000480548 HDLBPQ00341 1268 aaKnown RBP8.53□□□□□ -1.04
SGIP1-209ENST00000480548 OCLNQ16625 522 aa8.53□□□□□ -1.04
SGIP1-209ENST00000480548 MAP7D1Q3KQU3 841 aa8.53□□□□□ -1.04
SGIP1-209ENST00000480548 PHTF2Q8N3S3 785 aa8.53□□□□□ -1.04
SGIP1-209ENST00000480548 LARGE2Q8N3Y3 721 aa8.53□□□□□ -1.04
SGIP1-209ENST00000480548 PRIMPOLQ96LW4 560 aa8.53□□□□□ -1.04
SGIP1-209ENST00000480548 POLR3GLQ9BT43 218 aa8.53□□□□□ -1.04
SGIP1-209ENST00000480548 LHX6Q9UPM6 363 aa8.53□□□□□ -1.04
SGIP1-209ENST00000480548 HDGFP51858 240 aaKnown RBP8.52□□□□□ -1.05
SGIP1-209ENST00000480548 GIMAP6Q6P9H5 292 aa8.52□□□□□ -1.05
SGIP1-209ENST00000480548 DPH6Q7L8W6 267 aa8.52□□□□□ -1.05
SGIP1-209ENST00000480548 NOD1Q9Y239 953 aa8.52□□□□□ -1.05
SGIP1-209ENST00000480548 MCCD1P59942 119 aaPredicted RBP8.51□□□□□ -1.05
SGIP1-209ENST00000480548 DOK7Q18PE1 504 aa8.51□□□□□ -1.05
SGIP1-209ENST00000480548 Q3C1V9 767 aa8.51□□□□□ -1.05
SGIP1-209ENST00000480548 C9orf131Q5VYM1 1079 aa8.51□□□□□ -1.05
SGIP1-209ENST00000480548 GTF3C2Q8WUA4 911 aaPredicted RBP8.51□□□□□ -1.05
SGIP1-209ENST00000480548 PIK3R5Q8WYR1 880 aa8.51□□□□□ -1.05
SGIP1-209ENST00000480548 HIRIP3Q9BW71 556 aaPredicted RBP8.51□□□□□ -1.05
SGIP1-209ENST00000480548 KIAA1468Q9P260 1216 aa8.51□□□□□ -1.05
SGIP1-209ENST00000480548 RBM19Q9Y4C8 960 aaKnown RBP8.51□□□□□ -1.05
SGIP1-209ENST00000480548 PCDHB9Q9Y5E1 797 aa8.51□□□□□ -1.05
SGIP1-209ENST00000480548 SEC13P55735 322 aa8.5□□□□□ -1.05
SGIP1-209ENST00000480548 ARHGAP4P98171 946 aa8.5□□□□□ -1.05
SGIP1-209ENST00000480548 MRPL58Q14197 206 aaKnown RBP8.5□□□□□ -1.05
SGIP1-209ENST00000480548 RGL4Q8IZJ4 473 aa8.5□□□□□ -1.05
SGIP1-209ENST00000480548 SIX5Q8N196 739 aa8.5□□□□□ -1.05
SGIP1-209ENST00000480548 CHIC2Q9UKJ5 165 aa8.5□□□□□ -1.05
SGIP1-209ENST00000480548 RIMBP2O15034 1052 aa8.49□□□□□ -1.05
SGIP1-209ENST00000480548 F12P00748 615 aaPredicted RBP8.49□□□□□ -1.05
SGIP1-209ENST00000480548 FKBP4Q02790 459 aaKnown RBP eCLIP8.49□□□□□ -1.05
SGIP1-209ENST00000480548 SF3B2Q13435 895 aaKnown RBP8.49□□□□□ -1.05
SGIP1-209ENST00000480548 ECM1Q16610 540 aa8.49□□□□□ -1.05
SGIP1-209ENST00000480548 TANGO6Q9C0B7 1094 aa8.49□□□□□ -1.05
SGIP1-209ENST00000480548 CWC22Q9HCG8 908 aaKnown RBP8.49□□□□□ -1.05
SGIP1-209ENST00000480548 ZSWIM6Q9HCJ5 1215 aa8.49□□□□□ -1.05
SGIP1-209ENST00000480548 DNMT3AQ9Y6K1 912 aaPredicted RBP8.49□□□□□ -1.05
SGIP1-209ENST00000480548 DKK1O94907 266 aa8.48□□□□□ -1.05
SGIP1-209ENST00000480548 PTK2Q05397 1052 aa8.48□□□□□ -1.05
SGIP1-209ENST00000480548 TRAF7Q6Q0C0 670 aa8.48□□□□□ -1.05
SGIP1-209ENST00000480548 MAP10Q9P2G4 905 aa8.48□□□□□ -1.05
SGIP1-209ENST00000480548 SEPT3Q9UH03 358 aa8.48□□□□□ -1.05
SGIP1-209ENST00000480548 KIAA1024Q9UPX6 916 aa8.48□□□□□ -1.05
SGIP1-209ENST00000480548 GPSM3Q9Y4H4 160 aa8.48□□□□□ -1.05
SGIP1-209ENST00000480548 FMNL1O95466 1100 aaPredicted RBP8.47□□□□□ -1.05
SGIP1-209ENST00000480548 P4HBP07237 508 aaKnown RBP8.47□□□□□ -1.05
SGIP1-209ENST00000480548 MTMR3Q13615 1198 aa8.47□□□□□ -1.05
SGIP1-209ENST00000480548 GPR153Q6NV75 609 aa8.47□□□□□ -1.05
SGIP1-209ENST00000480548 DNAJC2Q99543 621 aaKnown RBP8.47□□□□□ -1.05
SGIP1-209ENST00000480548 MKNK1Q9BUB5 465 aa8.47□□□□□ -1.05
SGIP1-209ENST00000480548 METRNQ9UJH8 293 aa8.47□□□□□ -1.05
SGIP1-209ENST00000480548 ZBTB7BO15156 539 aaPredicted RBP8.46□□□□□ -1.06
SGIP1-209ENST00000480548 GTF2IP78347 998 aa8.46□□□□□ -1.06
SGIP1-209ENST00000480548 MORN1Q5T089 497 aa8.46□□□□□ -1.06
SGIP1-209ENST00000480548 NOP9Q86U38 636 aaKnown RBP8.46□□□□□ -1.06
SGIP1-209ENST00000480548 FAM163AQ96GL9 167 aaPredicted RBP8.46□□□□□ -1.06
SGIP1-209ENST00000480548 KCNK17Q96T54 332 aa8.46□□□□□ -1.06
SGIP1-209ENST00000480548 SLC27A5Q9Y2P5 690 aa8.46□□□□□ -1.06
SGIP1-209ENST00000480548 SFI1A8K8P3 1242 aa8.45□□□□□ -1.06
SGIP1-209ENST00000480548 RAD51AP2Q09MP3 1159 aa8.45□□□□□ -1.06
SGIP1-209ENST00000480548 CCDC102BQ68D86 513 aa8.45□□□□□ -1.06
SGIP1-209ENST00000480548 NT5DC4Q86YG4 428 aa8.45□□□□□ -1.06
SGIP1-209ENST00000480548 BRPF3Q9ULD4 1205 aa8.45□□□□□ -1.06
SGIP1-209ENST00000480548 DOLKQ9UPQ8 538 aa8.45□□□□□ -1.06
SGIP1-209ENST00000480548 POTEJP0CG39 1038 aa8.44□□□□□ -1.06
SGIP1-209ENST00000480548 HOXB3P14651 431 aaPredicted RBP8.44□□□□□ -1.06
SGIP1-209ENST00000480548 CTHP32929 405 aa8.44□□□□□ -1.06
SGIP1-209ENST00000480548 TSGA10IPQ3SY00 556 aa8.44□□□□□ -1.06
SGIP1-209ENST00000480548 KMT5BQ4FZB7 885 aa8.44□□□□□ -1.06
SGIP1-209ENST00000480548 TPCN2Q8NHX9 752 aa8.44□□□□□ -1.06
SGIP1-209ENST00000480548 KCNH8Q96L42 1107 aa8.44□□□□□ -1.06
SGIP1-209ENST00000480548 HINFPQ9BQA5 517 aa8.44□□□□□ -1.06
SGIP1-209ENST00000480548 SEPT9Q9UHD8 586 aaPredicted RBP8.44□□□□□ -1.06
SGIP1-209ENST00000480548 RNF40O75150 1001 aa8.43□□□□□ -1.06
SGIP1-209ENST00000480548 LGR5O75473 907 aa8.43□□□□□ -1.06
SGIP1-209ENST00000480548 PSME1Q06323 249 aa8.43□□□□□ -1.06
SGIP1-209ENST00000480548 PUS10Q3MIT2 529 aaKnown RBP8.43□□□□□ -1.06
SGIP1-209ENST00000480548 OXLD1Q5BKU9 147 aa8.43□□□□□ -1.06
SGIP1-209ENST00000480548 LDLRAD1Q5T700 205 aa8.43□□□□□ -1.06
SGIP1-209ENST00000480548 PDXDC2PQ6P474 469 aa8.43□□□□□ -1.06
SGIP1-209ENST00000480548 TMEM87AQ8NBN3 555 aa8.43□□□□□ -1.06
SGIP1-209ENST00000480548 USB1Q9BQ65 265 aaKnown RBP8.43□□□□□ -1.06
SGIP1-209ENST00000480548 TINF2Q9BSI4 451 aa8.43□□□□□ -1.06
SGIP1-209ENST00000480548 LNPKQ9C0E8 428 aa8.43□□□□□ -1.06
SGIP1-209ENST00000480548 CUEDC1Q9NWM3 386 aaPredicted RBP8.43□□□□□ -1.06
SGIP1-209ENST00000480548 PRKAG2Q9UGJ0 569 aa8.43□□□□□ -1.06
SGIP1-209ENST00000480548 TMA7Q9Y2S6 64 aaKnown RBP8.43□□□□□ -1.06
SGIP1-209ENST00000480548 PTCD1O75127 700 aaKnown RBP8.42□□□□□ -1.06
SGIP1-209ENST00000480548 ITGAEP38570 1179 aa8.42□□□□□ -1.06
SGIP1-209ENST00000480548 XPCQ01831 940 aaPredicted RBP8.42□□□□□ -1.06
SGIP1-209ENST00000480548 PTPRNQ16849 979 aa8.42□□□□□ -1.06
SGIP1-209ENST00000480548 TMC7Q7Z402 723 aa8.42□□□□□ -1.06
SGIP1-209ENST00000480548 ARMC2Q8NEN0 867 aa8.42□□□□□ -1.06
SGIP1-209ENST00000480548 GPKOWQ92917 476 aaPredicted RBP eCLIP8.42□□□□□ -1.06
SGIP1-209ENST00000480548 OCSTAMPQ9BR26 566 aa8.42□□□□□ -1.06
SGIP1-209ENST00000480548 CCSER2Q9H7U1 834 aa8.42□□□□□ -1.06
SGIP1-209ENST00000480548 MRS2Q9HD23 443 aa8.42□□□□□ -1.06
SGIP1-209ENST00000480548 RNF19BQ6ZMZ0 732 aa8.41□□□□□ -1.06
SGIP1-209ENST00000480548 ZNF662Q6ZS27 426 aa8.41□□□□□ -1.06
SGIP1-209ENST00000480548 SAMD7Q7Z3H4 446 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms