RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 ZBED9Q6R2W3 1325 aa13.94□□□□□ -0.18
LINC00173-203ENST00000480237 TTC21AQ8NDW8 1320 aa13.94□□□□□ -0.18
LINC00173-203ENST00000480237 NHSL1Q5SYE7 1610 aa13.94□□□□□ -0.18
LINC00173-203ENST00000480237 PAK3O75914 559 aaPredicted RBP13.94□□□□□ -0.18
LINC00173-203ENST00000480237 COG3Q96JB2 828 aa13.94□□□□□ -0.18
LINC00173-203ENST00000480237 PHF8Q9UPP1 1060 aa13.94□□□□□ -0.18
LINC00173-203ENST00000480237 MSH6P52701 1360 aa13.94□□□□□ -0.18
LINC00173-203ENST00000480237 C1orf167Q5SNV9 1468 aa13.94□□□□□ -0.18
LINC00173-203ENST00000480237 MST1RQ04912 1400 aa13.94□□□□□ -0.18
LINC00173-203ENST00000480237 ABCA3Q99758 1704 aa13.94□□□□□ -0.18
LINC00173-203ENST00000480237 C19orf67A6NJJ6 358 aa13.93□□□□□ -0.18
LINC00173-203ENST00000480237 RGPD1P0DJD0 1748 aa13.93□□□□□ -0.18
LINC00173-203ENST00000480237 SMG6Q86US8 1419 aaKnown RBP13.93□□□□□ -0.18
LINC00173-203ENST00000480237 MTHFSP49914 203 aa13.92□□□□□ -0.18
LINC00173-203ENST00000480237 C19orf44Q9H6X5 657 aa13.92□□□□□ -0.18
LINC00173-203ENST00000480237 ATF3P18847 181 aa13.92□□□□□ -0.18
LINC00173-203ENST00000480237 ZNF335Q9H4Z2 1342 aaPredicted RBP13.91□□□□□ -0.18
LINC00173-203ENST00000480237 GSE1Q14687 1217 aa13.91□□□□□ -0.18
LINC00173-203ENST00000480237 ESCO1Q5FWF5 840 aa13.91□□□□□ -0.18
LINC00173-203ENST00000480237 ZRANB1Q9UGI0 708 aa13.91□□□□□ -0.18
LINC00173-203ENST00000480237 AATKQ6ZMQ8 1374 aa13.89□□□□□ -0.19
LINC00173-203ENST00000480237 RTN4Q9NQC3 1192 aaKnown RBP13.89□□□□□ -0.19
LINC00173-203ENST00000480237 ADAMTS8Q9UP79 889 aa13.88□□□□□ -0.19
LINC00173-203ENST00000480237 USP31Q70CQ4 1352 aa13.88□□□□□ -0.19
LINC00173-203ENST00000480237 FAM208AQ9UK61 1670 aaKnown RBP13.87□□□□□ -0.19
LINC00173-203ENST00000480237 ROBO1Q9Y6N7 1651 aa13.87□□□□□ -0.19
LINC00173-203ENST00000480237 NFAT5O94916 1531 aa13.87□□□□□ -0.19
LINC00173-203ENST00000480237 CADPS2Q86UW7 1296 aa13.87□□□□□ -0.19
LINC00173-203ENST00000480237 IQSEC2Q5JU85 1478 aa13.86□□□□□ -0.19
LINC00173-203ENST00000480237 SENP3-EIF4A1A0A087X0R7 540 aa13.86□□□□□ -0.19
LINC00173-203ENST00000480237 PSME1Q06323 249 aa13.86□□□□□ -0.19
LINC00173-203ENST00000480237 ORAI2Q96SN7 254 aa13.86□□□□□ -0.19
LINC00173-203ENST00000480237 SLIT3O75094 1523 aa13.85□□□□□ -0.19
LINC00173-203ENST00000480237 PPM1GO15355 546 aaPredicted RBP13.85□□□□□ -0.19
LINC00173-203ENST00000480237 EVX2Q03828 476 aa13.85□□□□□ -0.19
LINC00173-203ENST00000480237 LTBP4Q8N2S1 1624 aa13.85□□□□□ -0.19
LINC00173-203ENST00000480237 POLKQ9UBT6 870 aa13.84□□□□□ -0.19
LINC00173-203ENST00000480237 NUDCQ9Y266 331 aa13.84□□□□□ -0.19
LINC00173-203ENST00000480237 PNPLA6Q8IY17 1366 aa13.84□□□□□ -0.19
LINC00173-203ENST00000480237 FBLN1P23142 703 aa13.83□□□□□ -0.19
LINC00173-203ENST00000480237 CCDC146Q8IYE0 955 aa13.83□□□□□ -0.19
LINC00173-203ENST00000480237 ABTB2Q8N961 1025 aa13.83□□□□□ -0.19
LINC00173-203ENST00000480237 EMILIN1Q9Y6C2 1016 aa13.83□□□□□ -0.19
LINC00173-203ENST00000480237 MED1Q15648 1581 aaPredicted RBP13.83□□□□□ -0.2
LINC00173-203ENST00000480237 PXDNQ92626 1479 aa13.83□□□□□ -0.2
LINC00173-203ENST00000480237 SOX12O15370 315 aa13.83□□□□□ -0.2
LINC00173-203ENST00000480237 NLRP6P59044 892 aa13.83□□□□□ -0.2
LINC00173-203ENST00000480237 RRS1Q15050 365 aaKnown RBP13.83□□□□□ -0.2
LINC00173-203ENST00000480237 PHLPP1O60346 1717 aa13.82□□□□□ -0.2
LINC00173-203ENST00000480237 U2SURPO15042 1029 aaKnown RBP13.82□□□□□ -0.2
LINC00173-203ENST00000480237 FOXO3O43524 673 aa13.82□□□□□ -0.2
LINC00173-203ENST00000480237 DIAPH1O60610 1272 aaKnown RBP13.82□□□□□ -0.2
LINC00173-203ENST00000480237 NUTM2GQ5VZR2 741 aa13.82□□□□□ -0.2
LINC00173-203ENST00000480237 SALL2Q9Y467 1007 aaPredicted RBP13.82□□□□□ -0.2
LINC00173-203ENST00000480237 U2AF1L5P0DN76 240 aaPredicted RBP13.81□□□□□ -0.2
LINC00173-203ENST00000480237 U2AF1Q01081 240 aaKnown RBP eCLIP13.81□□□□□ -0.2
LINC00173-203ENST00000480237 XPCQ01831 940 aaPredicted RBP13.81□□□□□ -0.2
LINC00173-203ENST00000480237 COL18A1P39060 1754 aa13.81□□□□□ -0.2
LINC00173-203ENST00000480237 SBNO1A3KN83 1393 aa13.8□□□□□ -0.2
LINC00173-203ENST00000480237 FLT4P35916 1363 aa13.8□□□□□ -0.2
LINC00173-203ENST00000480237 CAMTA1Q9Y6Y1 1673 aa13.8□□□□□ -0.2
LINC00173-203ENST00000480237 NPHP3Q7Z494 1330 aa13.8□□□□□ -0.2
LINC00173-203ENST00000480237 PYGBP11216 843 aa13.79□□□□□ -0.2
LINC00173-203ENST00000480237 TNS3Q68CZ2 1445 aa13.79□□□□□ -0.2
LINC00173-203ENST00000480237 KRT28Q7Z3Y7 464 aa13.79□□□□□ -0.2
LINC00173-203ENST00000480237 RUNDC1Q96C34 613 aa13.78□□□□□ -0.2
LINC00173-203ENST00000480237 RTL1A6NKG5 1358 aa13.77□□□□□ -0.2
LINC00173-203ENST00000480237 MAP3K19Q56UN5 1328 aa13.77□□□□□ -0.2
LINC00173-203ENST00000480237 ECM2O94769 699 aaPredicted RBP13.77□□□□□ -0.21
LINC00173-203ENST00000480237 LMOD2Q6P5Q4 547 aa13.77□□□□□ -0.21
LINC00173-203ENST00000480237 PHF12Q96QT6 1004 aa13.77□□□□□ -0.21
LINC00173-203ENST00000480237 KIF24Q5T7B8 1368 aa13.77□□□□□ -0.21
LINC00173-203ENST00000480237 MAPK8IP3Q9UPT6 1336 aa13.76□□□□□ -0.21
LINC00173-203ENST00000480237 APAF1O14727 1248 aa13.76□□□□□ -0.21
LINC00173-203ENST00000480237 AHDC1Q5TGY3 1603 aaPredicted RBP13.76□□□□□ -0.21
LINC00173-203ENST00000480237 AMPHP49418 695 aa13.75□□□□□ -0.21
LINC00173-203ENST00000480237 PDE3BQ13370 1112 aa13.75□□□□□ -0.21
LINC00173-203ENST00000480237 PNNQ9H307 717 aaKnown RBP13.75□□□□□ -0.21
LINC00173-203ENST00000480237 ABCC6O95255 1503 aa13.75□□□□□ -0.21
LINC00173-203ENST00000480237 BRINP3Q76B58 766 aa13.75□□□□□ -0.21
LINC00173-203ENST00000480237 GTF3C3Q9Y5Q9 886 aa13.75□□□□□ -0.21
LINC00173-203ENST00000480237 COL22A1Q8NFW1 1626 aaPredicted RBP13.74□□□□□ -0.21
LINC00173-203ENST00000480237 NEFMP07197 916 aa13.74□□□□□ -0.21
LINC00173-203ENST00000480237 IL13P35225 146 aa13.74□□□□□ -0.21
LINC00173-203ENST00000480237 NGEFQ8N5V2 710 aa13.74□□□□□ -0.21
LINC00173-203ENST00000480237 ZNF579Q8NAF0 562 aaKnown RBP13.74□□□□□ -0.21
LINC00173-203ENST00000480237 KCNH5Q8NCM2 988 aa13.74□□□□□ -0.21
LINC00173-203ENST00000480237 DDX17Q92841 729 aaKnown RBP13.74□□□□□ -0.21
LINC00173-203ENST00000480237 SLAIN2Q9P270 581 aa13.74□□□□□ -0.21
LINC00173-203ENST00000480237 ARHGEF10O15013 1369 aa13.74□□□□□ -0.21
LINC00173-203ENST00000480237 CACNA1FO60840 1977 aa13.73□□□□□ -0.21
LINC00173-203ENST00000480237 USP19O94966 1318 aa13.73□□□□□ -0.21
LINC00173-203ENST00000480237 WNK3Q9BYP7 1800 aa13.73□□□□□ -0.21
LINC00173-203ENST00000480237 EIF4A2Q14240 407 aaKnown RBP13.73□□□□□ -0.21
LINC00173-203ENST00000480237 TCP11L2Q8N4U5 519 aa13.73□□□□□ -0.21
LINC00173-203ENST00000480237 LMO7Q8WWI1 1683 aa13.73□□□□□ -0.21
LINC00173-203ENST00000480237 HSP90AB2PQ58FF8 381 aa13.72□□□□□ -0.21
LINC00173-203ENST00000480237 PARP4Q9UKK3 1724 aaKnown RBP13.72□□□□□ -0.21
LINC00173-203ENST00000480237 HMOX1P09601 288 aa13.71□□□□□ -0.21
LINC00173-203ENST00000480237 NEUROD2Q15784 382 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms