RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 PAPPAQ13219 1627 aa18.12■□□□□ 0.49
USP11-208ENST00000480104 POLD1P28340 1107 aa18.12■□□□□ 0.49
USP11-208ENST00000480104 RGL3Q3MIN7 710 aa18.12■□□□□ 0.49
USP11-208ENST00000480104 CPDO75976 1380 aa18.12■□□□□ 0.49
USP11-208ENST00000480104 CRB1P82279 1406 aa18.12■□□□□ 0.49
USP11-208ENST00000480104 TULP4Q9NRJ4 1543 aa18.12■□□□□ 0.49
USP11-208ENST00000480104 ZNF827Q17R98 1081 aa18.11■□□□□ 0.49
USP11-208ENST00000480104 TOPAZ1Q8N9V7 1692 aa18.11■□□□□ 0.49
USP11-208ENST00000480104 EIF3AQ14152 1382 aaKnown RBP18.1■□□□□ 0.49
USP11-208ENST00000480104 LOC105371045A0A1W2PR82 267 aa18.1■□□□□ 0.49
USP11-208ENST00000480104 POGKQ9P215 609 aa18.1■□□□□ 0.49
USP11-208ENST00000480104 KIF3CO14782 793 aa18.09■□□□□ 0.49
USP11-208ENST00000480104 SPATA31E1Q6ZUB1 1445 aa18.08■□□□□ 0.49
USP11-208ENST00000480104 C14orf93Q9H972 538 aaKnown RBP18.06■□□□□ 0.48
USP11-208ENST00000480104 MINK1Q8N4C8 1332 aaPredicted RBP18.05■□□□□ 0.48
USP11-208ENST00000480104 SLC16A10Q8TF71 515 aa18.04■□□□□ 0.48
USP11-208ENST00000480104 USP19O94966 1318 aa18.03■□□□□ 0.48
USP11-208ENST00000480104 CFAP70Q5T0N1 1121 aa18.03■□□□□ 0.48
USP11-208ENST00000480104 AKAP12Q02952 1782 aa18.03■□□□□ 0.48
USP11-208ENST00000480104 COL24A1Q17RW2 1714 aa18.03■□□□□ 0.48
USP11-208ENST00000480104 WASLO00401 505 aaPredicted RBP18.02■□□□□ 0.48
USP11-208ENST00000480104 JMYQ8N9B5 988 aa18.02■□□□□ 0.48
USP11-208ENST00000480104 TOM1L2Q6ZVM7 507 aa18■□□□□ 0.47
USP11-208ENST00000480104 KLRG1Q96E93 195 aa18■□□□□ 0.47
USP11-208ENST00000480104 SLC4A1APQ9BWU0 796 aaKnown RBP18■□□□□ 0.47
USP11-208ENST00000480104 PCDH10Q9P2E7 1040 aa18■□□□□ 0.47
USP11-208ENST00000480104 WNK3Q9BYP7 1800 aa18■□□□□ 0.47
USP11-208ENST00000480104 PNPLA7Q6ZV29 1317 aa17.99■□□□□ 0.47
USP11-208ENST00000480104 ZBTB7CA1YPR0 619 aa17.99■□□□□ 0.47
USP11-208ENST00000480104 AKT1S1Q96B36 256 aa17.99■□□□□ 0.47
USP11-208ENST00000480104 LRRC4BQ9NT99 713 aa17.99■□□□□ 0.47
USP11-208ENST00000480104 GCP02774 474 aa17.98■□□□□ 0.47
USP11-208ENST00000480104 HTRA3P83110 453 aa17.98■□□□□ 0.47
USP11-208ENST00000480104 NHSQ6T4R5 1651 aa17.97■□□□□ 0.47
USP11-208ENST00000480104 ABTB2Q8N961 1025 aa17.97■□□□□ 0.47
USP11-208ENST00000480104 CDCA7Q9BWT1 371 aaPredicted RBP17.97■□□□□ 0.47
USP11-208ENST00000480104 WWC3Q9ULE0 1092 aa17.97■□□□□ 0.47
USP11-208ENST00000480104 WDR90Q96KV7 1748 aa17.97■□□□□ 0.47
USP11-208ENST00000480104 ACSBG1Q96GR2 724 aa17.96■□□□□ 0.47
USP11-208ENST00000480104 BRD4O60885 1362 aaPredicted RBP17.95■□□□□ 0.46
USP11-208ENST00000480104 TOMM70O94826 608 aa17.95■□□□□ 0.46
USP11-208ENST00000480104 NUDT16Q96DE0 195 aaKnown RBP17.95■□□□□ 0.46
USP11-208ENST00000480104 TRAK1Q9UPV9 953 aa17.95■□□□□ 0.46
USP11-208ENST00000480104 ITSN1Q15811 1721 aa17.95■□□□□ 0.46
USP11-208ENST00000480104 POLR3AO14802 1390 aaPredicted RBP17.94■□□□□ 0.46
USP11-208ENST00000480104 QSER1Q2KHR3 1735 aa17.94■□□□□ 0.46
USP11-208ENST00000480104 WDR17Q8IZU2 1322 aa17.94■□□□□ 0.46
USP11-208ENST00000480104 ACEP12821 1306 aa17.93■□□□□ 0.46
USP11-208ENST00000480104 TNS2Q63HR2 1409 aa17.92■□□□□ 0.46
USP11-208ENST00000480104 ADGRB1O14514 1584 aa17.91■□□□□ 0.46
USP11-208ENST00000480104 USP6P35125 1406 aa17.91■□□□□ 0.46
USP11-208ENST00000480104 EXOC5O00471 708 aa17.91■□□□□ 0.46
USP11-208ENST00000480104 NLRP13Q86W25 1043 aa17.91■□□□□ 0.46
USP11-208ENST00000480104 TFCP2L1Q9NZI6 479 aa17.91■□□□□ 0.46
USP11-208ENST00000480104 BTAF1O14981 1849 aa17.89■□□□□ 0.45
USP11-208ENST00000480104 TUBGCP6Q96RT7 1819 aa17.89■□□□□ 0.45
USP11-208ENST00000480104 ARHGEF28Q8N1W1 1705 aaKnown RBP17.89■□□□□ 0.45
USP11-208ENST00000480104 AXIN2Q9Y2T1 843 aa17.88■□□□□ 0.45
USP11-208ENST00000480104 MSL1Q68DK7 614 aa17.87■□□□□ 0.45
USP11-208ENST00000480104 CARD10Q9BWT7 1032 aa17.87■□□□□ 0.45
USP11-208ENST00000480104 CD2APQ9Y5K6 639 aa17.87■□□□□ 0.45
USP11-208ENST00000480104 SLC27A3Q5K4L6 730 aa17.86■□□□□ 0.45
USP11-208ENST00000480104 ABCC6O95255 1503 aa17.85■□□□□ 0.45
USP11-208ENST00000480104 COL18A1P39060 1754 aa17.84■□□□□ 0.45
USP11-208ENST00000480104 HSPA1AP0DMV8 641 aaKnown RBP17.84■□□□□ 0.45
USP11-208ENST00000480104 HSPA1BP0DMV9 641 aaKnown RBP17.84■□□□□ 0.45
USP11-208ENST00000480104 KCNQ4P56696 695 aa17.84■□□□□ 0.45
USP11-208ENST00000480104 NMRK2Q9NPI5 230 aa17.84■□□□□ 0.45
USP11-208ENST00000480104 MSH5O43196 834 aa17.83■□□□□ 0.44
USP11-208ENST00000480104 CSB-PGBD3P0DP91 1061 aa17.83■□□□□ 0.44
USP11-208ENST00000480104 RBM46Q8TBY0 533 aaKnown RBP17.83■□□□□ 0.44
USP11-208ENST00000480104 SLIT3O75094 1523 aa17.82■□□□□ 0.44
USP11-208ENST00000480104 PLEKHG3A1L390 1219 aa17.82■□□□□ 0.44
USP11-208ENST00000480104 CPSF1Q10570 1443 aaKnown RBP17.81■□□□□ 0.44
USP11-208ENST00000480104 PPIP5K1Q6PFW1 1433 aa17.81■□□□□ 0.44
USP11-208ENST00000480104 IGSF1Q8N6C5 1336 aa17.81■□□□□ 0.44
USP11-208ENST00000480104 TRPM1Q7Z4N2 1603 aa17.81■□□□□ 0.44
USP11-208ENST00000480104 CCDC61Q9Y6R9 512 aa17.81■□□□□ 0.44
USP11-208ENST00000480104 COL23A1Q86Y22 540 aaPredicted RBP17.8■□□□□ 0.44
USP11-208ENST00000480104 CDK19Q9BWU1 502 aa17.8■□□□□ 0.44
USP11-208ENST00000480104 CCDC7Q96M83 1385 aa17.79■□□□□ 0.44
USP11-208ENST00000480104 NLRP6P59044 892 aa17.78■□□□□ 0.44
USP11-208ENST00000480104 CICQ96RK0 1608 aaPredicted RBP17.78■□□□□ 0.44
USP11-208ENST00000480104 FSTL1Q12841 308 aa17.77■□□□□ 0.44
USP11-208ENST00000480104 C16orf71Q8IYS4 520 aaPredicted RBP17.75■□□□□ 0.43
USP11-208ENST00000480104 ARHGEF25Q86VW2 580 aa17.74■□□□□ 0.43
USP11-208ENST00000480104 KAT6BQ8WYB5 2073 aa17.73■□□□□ 0.43
USP11-208ENST00000480104 FAM161AQ3B820 660 aa17.73■□□□□ 0.43
USP11-208ENST00000480104 RGPD5Q99666 1765 aa17.71■□□□□ 0.43
USP11-208ENST00000480104 PIK3C2AO00443 1686 aa17.71■□□□□ 0.42
USP11-208ENST00000480104 SOX12O15370 315 aa17.69■□□□□ 0.42
USP11-208ENST00000480104 CCNL1Q9UK58 526 aaPredicted RBP17.69■□□□□ 0.42
USP11-208ENST00000480104 IL2RBP14784 551 aa17.68■□□□□ 0.42
USP11-208ENST00000480104 MPHOSPH9Q99550 1183 aa17.67■□□□□ 0.42
USP11-208ENST00000480104 SYTL4Q96C24 671 aaPredicted RBP17.66■□□□□ 0.42
USP11-208ENST00000480104 LY75O60449 1722 aa17.66■□□□□ 0.42
USP11-208ENST00000480104 NSD2O96028 1365 aa17.66■□□□□ 0.42
USP11-208ENST00000480104 NLRP2Q9NX02 1062 aa17.65■□□□□ 0.42
USP11-208ENST00000480104 NFAT5O94916 1531 aa17.63■□□□□ 0.41
USP11-208ENST00000480104 PRIM1P49642 420 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms