RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 IGSF3O75054 1194 aa9.95□□□□□ -0.82
PBRM1-220ENST00000480064 HDGFL1Q5TGJ6 251 aa9.95□□□□□ -0.82
PBRM1-220ENST00000480064 NUTM2DQ5VT03 806 aaPredicted RBP9.95□□□□□ -0.82
PBRM1-220ENST00000480064 FBXO31Q5XUX0 539 aaPredicted RBP9.95□□□□□ -0.82
PBRM1-220ENST00000480064 LYPD8Q6UX82 237 aa9.95□□□□□ -0.82
PBRM1-220ENST00000480064 NUTM2AQ8IVF1 878 aaPredicted RBP9.95□□□□□ -0.82
PBRM1-220ENST00000480064 SENP2Q9HC62 589 aa9.95□□□□□ -0.82
PBRM1-220ENST00000480064 WASF2Q9Y6W5 498 aa9.95□□□□□ -0.82
PBRM1-220ENST00000480064 SHROOM4Q9ULL8 1493 aa9.94□□□□□ -0.82
PBRM1-220ENST00000480064 CFAP99D6REC4 459 aa9.94□□□□□ -0.82
PBRM1-220ENST00000480064 ZNF511Q8NB15 262 aa9.94□□□□□ -0.82
PBRM1-220ENST00000480064 AMOTL2Q9Y2J4 779 aa9.94□□□□□ -0.82
PBRM1-220ENST00000480064 IVNS1ABPQ9Y6Y0 642 aa9.94□□□□□ -0.82
PBRM1-220ENST00000480064 SNRPBP14678 240 aaKnown RBP9.93□□□□□ -0.82
PBRM1-220ENST00000480064 CTHP32929 405 aa9.93□□□□□ -0.82
PBRM1-220ENST00000480064 LCE2AQ5TA79 106 aaPredicted RBP9.93□□□□□ -0.82
PBRM1-220ENST00000480064 PRPF38BQ5VTL8 546 aaKnown RBP9.93□□□□□ -0.82
PBRM1-220ENST00000480064 TRIM47Q96LD4 638 aa9.93□□□□□ -0.82
PBRM1-220ENST00000480064 SND1Q7KZF4 910 aaKnown RBP eCLIP9.92□□□□□ -0.82
PBRM1-220ENST00000480064 VARSP26640 1264 aaKnown RBP9.91□□□□□ -0.82
PBRM1-220ENST00000480064 CABLES1Q8TDN4 633 aa9.91□□□□□ -0.82
PBRM1-220ENST00000480064 KIFC2Q96AC6 838 aa9.91□□□□□ -0.82
PBRM1-220ENST00000480064 WFS1O76024 890 aa9.9□□□□□ -0.82
PBRM1-220ENST00000480064 QPCTQ16769 361 aa9.9□□□□□ -0.82
PBRM1-220ENST00000480064 CFAP70Q5T0N1 1121 aa9.9□□□□□ -0.82
PBRM1-220ENST00000480064 B4GALNT3Q6L9W6 998 aa9.9□□□□□ -0.82
PBRM1-220ENST00000480064 TLL2Q9Y6L7 1015 aa9.9□□□□□ -0.82
PBRM1-220ENST00000480064 LOC105371045A0A1W2PR82 267 aa9.89□□□□□ -0.83
PBRM1-220ENST00000480064 CAPN5O15484 640 aaPredicted RBP9.89□□□□□ -0.83
PBRM1-220ENST00000480064 LILRB3O75022 631 aa9.89□□□□□ -0.83
PBRM1-220ENST00000480064 PPP1R12CQ9BZL4 782 aa9.89□□□□□ -0.83
PBRM1-220ENST00000480064 F12P00748 615 aaPredicted RBP9.88□□□□□ -0.83
PBRM1-220ENST00000480064 MPNDQ8N594 471 aa9.88□□□□□ -0.83
PBRM1-220ENST00000480064 MAP10Q9P2G4 905 aa9.88□□□□□ -0.83
PBRM1-220ENST00000480064 LMOD1P29536 600 aaPredicted RBP9.87□□□□□ -0.83
PBRM1-220ENST00000480064 NFX1Q12986 1120 aaKnown RBP9.87□□□□□ -0.83
PBRM1-220ENST00000480064 ADAMTS19Q8TE59 1207 aa9.86□□□□□ -0.83
PBRM1-220ENST00000480064 TSC1Q92574 1164 aa9.86□□□□□ -0.83
PBRM1-220ENST00000480064 VRTNQ9H8Y1 702 aa9.86□□□□□ -0.83
PBRM1-220ENST00000480064 PER1O15534 1290 aaPredicted RBP9.85□□□□□ -0.83
PBRM1-220ENST00000480064 BMP1P13497 986 aa9.85□□□□□ -0.83
PBRM1-220ENST00000480064 RTL5Q5HYW3 569 aaPredicted RBP9.85□□□□□ -0.83
PBRM1-220ENST00000480064 TRIM46Q7Z4K8 759 aa9.85□□□□□ -0.83
PBRM1-220ENST00000480064 FAM174AQ8TBP5 190 aa9.85□□□□□ -0.83
PBRM1-220ENST00000480064 PALM3A6NDB9 673 aaPredicted RBP9.84□□□□□ -0.83
PBRM1-220ENST00000480064 VAC14Q08AM6 782 aa9.84□□□□□ -0.83
PBRM1-220ENST00000480064 NNTQ13423 1086 aa9.84□□□□□ -0.83
PBRM1-220ENST00000480064 FOXJ1Q92949 421 aa9.84□□□□□ -0.83
PBRM1-220ENST00000480064 TERTO14746 1132 aaKnown RBP9.83□□□□□ -0.84
PBRM1-220ENST00000480064 HELBQ8NG08 1087 aaPredicted RBP9.83□□□□□ -0.84
PBRM1-220ENST00000480064 GJD4Q96KN9 370 aaPredicted RBP9.83□□□□□ -0.84
PBRM1-220ENST00000480064 USP35Q9P2H5 1018 aa9.83□□□□□ -0.84
PBRM1-220ENST00000480064 CARNS1A5YM72 827 aa9.82□□□□□ -0.84
PBRM1-220ENST00000480064 HMGB1P09429 215 aaKnown RBP9.82□□□□□ -0.84
PBRM1-220ENST00000480064 SOX11P35716 441 aa9.82□□□□□ -0.84
PBRM1-220ENST00000480064 AGERQ15109 404 aa9.81□□□□□ -0.84
PBRM1-220ENST00000480064 CDK15Q96Q40 435 aa9.81□□□□□ -0.84
PBRM1-220ENST00000480064 ATG7O95352 703 aa9.8□□□□□ -0.84
PBRM1-220ENST00000480064 ADH1CP00326 375 aa9.8□□□□□ -0.84
PBRM1-220ENST00000480064 ARID5BQ14865 1188 aa9.8□□□□□ -0.84
PBRM1-220ENST00000480064 WDR4P57081 412 aaKnown RBP9.79□□□□□ -0.84
PBRM1-220ENST00000480064 SRPK2P78362 688 aaKnown RBP9.79□□□□□ -0.84
PBRM1-220ENST00000480064 BPHLQ86WA6 291 aaPredicted RBP9.79□□□□□ -0.84
PBRM1-220ENST00000480064 ARMC2Q8NEN0 867 aa9.79□□□□□ -0.84
PBRM1-220ENST00000480064 TIMP2P16035 220 aa9.78□□□□□ -0.84
PBRM1-220ENST00000480064 SEMA3FQ13275 785 aa9.78□□□□□ -0.84
PBRM1-220ENST00000480064 C4orf48Q5BLP8 95 aa9.78□□□□□ -0.84
PBRM1-220ENST00000480064 ZFP42Q96MM3 310 aa9.78□□□□□ -0.84
PBRM1-220ENST00000480064 TFIP11Q9UBB9 837 aaKnown RBP9.78□□□□□ -0.84
PBRM1-220ENST00000480064 WIPF1O43516 503 aa9.77□□□□□ -0.85
PBRM1-220ENST00000480064 CDCA8Q53HL2 280 aa9.77□□□□□ -0.85
PBRM1-220ENST00000480064 PNMA1Q8ND90 353 aa9.77□□□□□ -0.85
PBRM1-220ENST00000480064 CCER1Q8TC90 406 aaPredicted RBP9.77□□□□□ -0.85
PBRM1-220ENST00000480064 TMEM88BA6NKF7 163 aa9.76□□□□□ -0.85
PBRM1-220ENST00000480064 LCE2CQ5TA81 110 aa9.76□□□□□ -0.85
PBRM1-220ENST00000480064 MRPL14Q6P1L8 145 aaKnown RBP9.76□□□□□ -0.85
PBRM1-220ENST00000480064 KLF16Q9BXK1 252 aaPredicted RBP9.76□□□□□ -0.85
PBRM1-220ENST00000480064 ALG2Q9H553 416 aa9.76□□□□□ -0.85
PBRM1-220ENST00000480064 HMX1Q9NP08 348 aaPredicted RBP9.76□□□□□ -0.85
PBRM1-220ENST00000480064 NXF1Q9UBU9 619 aaKnown RBP9.76□□□□□ -0.85
PBRM1-220ENST00000480064 GNEQ9Y223 722 aaKnown RBP9.76□□□□□ -0.85
PBRM1-220ENST00000480064 NR5A1Q13285 461 aa9.75□□□□□ -0.85
PBRM1-220ENST00000480064 SCARF1Q14162 830 aa9.75□□□□□ -0.85
PBRM1-220ENST00000480064 SLC16A10Q8TF71 515 aa9.75□□□□□ -0.85
PBRM1-220ENST00000480064 MAFBQ9Y5Q3 323 aaPredicted RBP9.75□□□□□ -0.85
PBRM1-220ENST00000480064 GRM5P41594 1212 aa9.74□□□□□ -0.85
PBRM1-220ENST00000480064 NBPF14Q5TI25 921 aa9.74□□□□□ -0.85
PBRM1-220ENST00000480064 UCN2Q96RP3 112 aa9.74□□□□□ -0.85
PBRM1-220ENST00000480064 TRIM34Q9BYJ4 488 aa9.74□□□□□ -0.85
PBRM1-220ENST00000480064 ZIC2O95409 532 aaPredicted RBP9.73□□□□□ -0.85
PBRM1-220ENST00000480064 INSM1Q01101 510 aaPredicted RBP9.73□□□□□ -0.85
PBRM1-220ENST00000480064 CTDSPL2Q05D32 466 aa9.73□□□□□ -0.85
PBRM1-220ENST00000480064 SH3RF1Q7Z6J0 888 aa9.73□□□□□ -0.85
PBRM1-220ENST00000480064 PURBQ96QR8 312 aaKnown RBP9.73□□□□□ -0.85
PBRM1-220ENST00000480064 NR3C2P08235 984 aa9.72□□□□□ -0.85
PBRM1-220ENST00000480064 C1QTNF2Q9BXJ5 285 aa9.72□□□□□ -0.85
PBRM1-220ENST00000480064 ZFAND3Q9H8U3 227 aa9.72□□□□□ -0.85
PBRM1-220ENST00000480064 EIF4G2P78344 907 aaKnown RBP eCLIP9.71□□□□□ -0.86
PBRM1-220ENST00000480064 SH3BP5LQ7L8J4 393 aa9.71□□□□□ -0.86
PBRM1-220ENST00000480064 NPAS3Q8IXF0 933 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms