RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 TCP11L2Q8N4U5 519 aa7.46□□□□□ -1.21
CPS1-207ENST00000479988 ZMYM4Q5VZL5 1548 aa7.46□□□□□ -1.22
CPS1-207ENST00000479988 TTC21BQ7Z4L5 1316 aa7.46□□□□□ -1.22
CPS1-207ENST00000479988 MYOM2P54296 1465 aa7.46□□□□□ -1.22
CPS1-207ENST00000479988 LAMC1P11047 1609 aa7.46□□□□□ -1.22
CPS1-207ENST00000479988 RFC4P35249 363 aa7.46□□□□□ -1.22
CPS1-207ENST00000479988 CENPQQ7L2Z9 268 aaPredicted RBP7.46□□□□□ -1.22
CPS1-207ENST00000479988 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.46□□□□□ -1.22
CPS1-207ENST00000479988 PIK3C2GO75747 1445 aa7.46□□□□□ -1.22
CPS1-207ENST00000479988 PRDM15P57071 1507 aaPredicted RBP7.46□□□□□ -1.22
CPS1-207ENST00000479988 GNAI1P63096 354 aa7.46□□□□□ -1.22
CPS1-207ENST00000479988 RBM6P78332 1123 aaKnown RBP7.46□□□□□ -1.22
CPS1-207ENST00000479988 C16orf71Q8IYS4 520 aaPredicted RBP7.46□□□□□ -1.22
CPS1-207ENST00000479988 SMC4Q9NTJ3 1288 aa7.46□□□□□ -1.22
CPS1-207ENST00000479988 CFAP65Q6ZU64 1925 aaKnown RBP7.46□□□□□ -1.22
CPS1-207ENST00000479988 CASC1Q6TDU7 716 aa7.45□□□□□ -1.22
CPS1-207ENST00000479988 ACSBG1Q96GR2 724 aa7.45□□□□□ -1.22
CPS1-207ENST00000479988 TRIM34Q9BYJ4 488 aa7.45□□□□□ -1.22
CPS1-207ENST00000479988 POLR1AO95602 1720 aaPredicted RBP7.45□□□□□ -1.22
CPS1-207ENST00000479988 PRKAR2BP31323 418 aa7.45□□□□□ -1.22
CPS1-207ENST00000479988 AIMP1Q12904 312 aaKnown RBP7.45□□□□□ -1.22
CPS1-207ENST00000479988 PPIP5K1Q6PFW1 1433 aa7.45□□□□□ -1.22
CPS1-207ENST00000479988 BICDL1Q6ZP65 573 aa7.45□□□□□ -1.22
CPS1-207ENST00000479988 NECTIN2Q92692 538 aa7.45□□□□□ -1.22
CPS1-207ENST00000479988 EXOC6Q8TAG9 804 aa7.45□□□□□ -1.22
CPS1-207ENST00000479988 HMMRO75330 724 aa7.44□□□□□ -1.22
CPS1-207ENST00000479988 ADRA2BP18089 450 aa7.44□□□□□ -1.22
CPS1-207ENST00000479988 TEX13AQ9BXU3 409 aaPredicted RBP7.44□□□□□ -1.22
CPS1-207ENST00000479988 DDX17Q92841 729 aaKnown RBP7.44□□□□□ -1.22
CPS1-207ENST00000479988 ARID3AQ99856 593 aa7.44□□□□□ -1.22
CPS1-207ENST00000479988 AFF2P51816 1311 aa7.44□□□□□ -1.22
CPS1-207ENST00000479988 RNF123Q5XPI4 1314 aa7.44□□□□□ -1.22
CPS1-207ENST00000479988 SIRT1Q96EB6 747 aa7.44□□□□□ -1.22
CPS1-207ENST00000479988 SPATA31A6Q5VVP1 1343 aa7.44□□□□□ -1.22
CPS1-207ENST00000479988 TRPM1Q7Z4N2 1603 aa7.44□□□□□ -1.22
CPS1-207ENST00000479988 CT47B1P0C2W7 299 aaPredicted RBP7.44□□□□□ -1.22
CPS1-207ENST00000479988 FAM196AQ6ZSG2 479 aa7.44□□□□□ -1.22
CPS1-207ENST00000479988 KRT27Q7Z3Y8 459 aa7.44□□□□□ -1.22
CPS1-207ENST00000479988 WDR63Q8IWG1 891 aa7.44□□□□□ -1.22
CPS1-207ENST00000479988 NOP58Q9Y2X3 529 aaKnown RBP7.44□□□□□ -1.22
CPS1-207ENST00000479988 ARHGEF40Q8TER5 1519 aa7.43□□□□□ -1.22
CPS1-207ENST00000479988 A0A087WZG4 1122 aa7.43□□□□□ -1.22
CPS1-207ENST00000479988 PHF14O94880 888 aa7.43□□□□□ -1.22
CPS1-207ENST00000479988 HSP90AA1P07900 732 aaKnown RBP7.43□□□□□ -1.22
CPS1-207ENST00000479988 FKBP5Q13451 457 aaPredicted RBP7.43□□□□□ -1.22
CPS1-207ENST00000479988 NBR1Q14596 966 aa7.43□□□□□ -1.22
CPS1-207ENST00000479988 USHBP1Q8N6Y0 703 aa7.43□□□□□ -1.22
CPS1-207ENST00000479988 NSD3Q9BZ95 1437 aa7.43□□□□□ -1.22
CPS1-207ENST00000479988 ZBTB22O15209 634 aa7.43□□□□□ -1.22
CPS1-207ENST00000479988 GPATCH3Q96I76 525 aa7.43□□□□□ -1.22
CPS1-207ENST00000479988 PDE3AQ14432 1141 aa7.43□□□□□ -1.22
CPS1-207ENST00000479988 CWC22Q9HCG8 908 aaKnown RBP7.43□□□□□ -1.22
CPS1-207ENST00000479988 ABCC11Q96J66 1382 aa7.43□□□□□ -1.22
CPS1-207ENST00000479988 LMTK2Q8IWU2 1503 aa7.43□□□□□ -1.22
CPS1-207ENST00000479988 FGD1P98174 961 aa7.42□□□□□ -1.22
CPS1-207ENST00000479988 CDCA7LQ96GN5 454 aa7.42□□□□□ -1.22
CPS1-207ENST00000479988 SETD1BQ9UPS6 1966 aaKnown RBP7.42□□□□□ -1.22
CPS1-207ENST00000479988 BTBD11A6QL63 1104 aa7.42□□□□□ -1.22
CPS1-207ENST00000479988 WDHD1O75717 1129 aaPredicted RBP7.42□□□□□ -1.22
CPS1-207ENST00000479988 SLFN5Q08AF3 891 aa7.42□□□□□ -1.22
CPS1-207ENST00000479988 PAXIP1Q6ZW49 1069 aaPredicted RBP7.42□□□□□ -1.22
CPS1-207ENST00000479988 RWDD1Q9H446 243 aaPredicted RBP7.42□□□□□ -1.22
CPS1-207ENST00000479988 POLR3AO14802 1390 aaPredicted RBP7.42□□□□□ -1.22
CPS1-207ENST00000479988 GNAT3A8MTJ3 354 aa7.42□□□□□ -1.22
CPS1-207ENST00000479988 AMOTL1Q8IY63 956 aa7.42□□□□□ -1.22
CPS1-207ENST00000479988 CRBNQ96SW2 442 aa7.42□□□□□ -1.22
CPS1-207ENST00000479988 BRINP3Q76B58 766 aa7.41□□□□□ -1.22
CPS1-207ENST00000479988 AGLP35573 1532 aa7.41□□□□□ -1.22
CPS1-207ENST00000479988 NEURL4Q96JN8 1562 aa7.41□□□□□ -1.22
CPS1-207ENST00000479988 BECN1Q14457 450 aa7.41□□□□□ -1.22
CPS1-207ENST00000479988 GPR162Q16538 588 aa7.41□□□□□ -1.22
CPS1-207ENST00000479988 BCORL1Q5H9F3 1711 aa7.41□□□□□ -1.22
CPS1-207ENST00000479988 ARHGAP31Q2M1Z3 1444 aa7.41□□□□□ -1.22
CPS1-207ENST00000479988 PDE4CQ08493 712 aa7.41□□□□□ -1.22
CPS1-207ENST00000479988 UNC5CLQ8IV45 518 aa7.41□□□□□ -1.22
CPS1-207ENST00000479988 CCDC30Q5VVM6 783 aa7.41□□□□□ -1.22
CPS1-207ENST00000479988 RTCBQ9Y3I0 505 aaKnown RBP7.41□□□□□ -1.22
CPS1-207ENST00000479988 INO80Q9ULG1 1556 aaPredicted RBP7.41□□□□□ -1.22
CPS1-207ENST00000479988 PARP3Q9Y6F1 533 aa7.4□□□□□ -1.22
CPS1-207ENST00000479988 ANKRD36BQ8N2N9 1353 aa7.4□□□□□ -1.22
CPS1-207ENST00000479988 RIMS1Q86UR5 1692 aaKnown RBP7.4□□□□□ -1.22
CPS1-207ENST00000479988 ATP6V1AP38606 617 aa7.4□□□□□ -1.22
CPS1-207ENST00000479988 HDGFL1Q5TGJ6 251 aa7.4□□□□□ -1.22
CPS1-207ENST00000479988 ITPRIPQ8IWB1 547 aa7.4□□□□□ -1.22
CPS1-207ENST00000479988 IPO9Q96P70 1041 aaKnown RBP7.4□□□□□ -1.22
CPS1-207ENST00000479988 CCNL1Q9UK58 526 aaPredicted RBP7.4□□□□□ -1.22
CPS1-207ENST00000479988 KIF1BO60333 1816 aa7.4□□□□□ -1.22
CPS1-207ENST00000479988 FMNL2Q96PY5 1086 aa7.4□□□□□ -1.22
CPS1-207ENST00000479988 SPHKAPQ2M3C7 1700 aa7.4□□□□□ -1.23
CPS1-207ENST00000479988 ABCC3O15438 1527 aa7.4□□□□□ -1.23
CPS1-207ENST00000479988 FLAD1Q8NFF5 587 aa7.4□□□□□ -1.23
CPS1-207ENST00000479988 RPGRQ92834 1020 aaKnown RBP7.4□□□□□ -1.23
CPS1-207ENST00000479988 CFAP44Q96MT7 982 aa7.4□□□□□ -1.23
CPS1-207ENST00000479988 SYNMO15061 1565 aa7.4□□□□□ -1.23
CPS1-207ENST00000479988 APBB1O00213 710 aa7.39□□□□□ -1.23
CPS1-207ENST00000479988 HSP90AB3PQ58FF7 597 aa7.39□□□□□ -1.23
CPS1-207ENST00000479988 SEPT12Q8IYM1 358 aa7.39□□□□□ -1.23
CPS1-207ENST00000479988 CTDP1Q9Y5B0 961 aaPredicted RBP7.39□□□□□ -1.23
CPS1-207ENST00000479988 BLMP54132 1417 aaPredicted RBP7.39□□□□□ -1.23
CPS1-207ENST00000479988 ST5P78524 1137 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms