RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 RGPD1P0DJD0 1748 aa16.92■□□□□ 0.3
TRAPPC12-218ENST00000479897 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.91■□□□□ 0.3
TRAPPC12-218ENST00000479897 MIER1Q8N108 512 aa16.91■□□□□ 0.3
TRAPPC12-218ENST00000479897 HOXC9P31274 260 aa16.9■□□□□ 0.3
TRAPPC12-218ENST00000479897 IP6K1Q92551 441 aa16.9■□□□□ 0.3
TRAPPC12-218ENST00000479897 AMPHP49418 695 aa16.89■□□□□ 0.29
TRAPPC12-218ENST00000479897 ZC3H6P61129 1189 aaKnown RBP16.89■□□□□ 0.29
TRAPPC12-218ENST00000479897 PRDM11Q9NQV5 511 aa16.89■□□□□ 0.29
TRAPPC12-218ENST00000479897 SLIT2O94813 1529 aa16.89■□□□□ 0.29
TRAPPC12-218ENST00000479897 COL5A2P05997 1499 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC12-218ENST00000479897 CFAP53Q96M91 514 aa16.88■□□□□ 0.29
TRAPPC12-218ENST00000479897 PLEKHG5O94827 1062 aa16.87■□□□□ 0.29
TRAPPC12-218ENST00000479897 ERBB3P21860 1342 aa16.86■□□□□ 0.29
TRAPPC12-218ENST00000479897 NCAPD2Q15021 1401 aa16.86■□□□□ 0.29
TRAPPC12-218ENST00000479897 RGPD2P0DJD1 1756 aa16.85■□□□□ 0.29
TRAPPC12-218ENST00000479897 PPM1GO15355 546 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC12-218ENST00000479897 HSP90AB2PQ58FF8 381 aa16.85■□□□□ 0.29
TRAPPC12-218ENST00000479897 FAM83GA6ND36 823 aa16.84■□□□□ 0.29
TRAPPC12-218ENST00000479897 NUTM2BA6NNL0 878 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC12-218ENST00000479897 NUTM2EB1AL46 878 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC12-218ENST00000479897 NUTM2AQ8IVF1 878 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC12-218ENST00000479897 MRS2Q9HD23 443 aa16.84■□□□□ 0.29
TRAPPC12-218ENST00000479897 AXIN2Q9Y2T1 843 aa16.84■□□□□ 0.29
TRAPPC12-218ENST00000479897 DIAPH1O60610 1272 aaKnown RBP16.83■□□□□ 0.28
TRAPPC12-218ENST00000479897 EIF4A2Q14240 407 aaKnown RBP16.83■□□□□ 0.28
TRAPPC12-218ENST00000479897 CHRNA2Q15822 529 aa16.83■□□□□ 0.28
TRAPPC12-218ENST00000479897 CCDC184Q52MB2 194 aa16.83■□□□□ 0.28
TRAPPC12-218ENST00000479897 WNK3Q9BYP7 1800 aa16.82■□□□□ 0.28
TRAPPC12-218ENST00000479897 ZBTB7CA1YPR0 619 aa16.82■□□□□ 0.28
TRAPPC12-218ENST00000479897 ADAMTS2O95450 1211 aa16.82■□□□□ 0.28
TRAPPC12-218ENST00000479897 IL13P35225 146 aa16.82■□□□□ 0.28
TRAPPC12-218ENST00000479897 KDRP35968 1356 aa16.8■□□□□ 0.28
TRAPPC12-218ENST00000479897 PLEKHG2Q9H7P9 1386 aa16.8■□□□□ 0.28
TRAPPC12-218ENST00000479897 WDR17Q8IZU2 1322 aa16.8■□□□□ 0.28
TRAPPC12-218ENST00000479897 IGSF1Q8N6C5 1336 aa16.8■□□□□ 0.28
TRAPPC12-218ENST00000479897 FNBP4Q8N3X1 1017 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC12-218ENST00000479897 ANKRD24Q8TF21 1146 aa16.8■□□□□ 0.28
TRAPPC12-218ENST00000479897 NUDCQ9Y266 331 aa16.8■□□□□ 0.28
TRAPPC12-218ENST00000479897 BCL9LQ86UU0 1499 aa16.8■□□□□ 0.28
TRAPPC12-218ENST00000479897 PNISRQ8TF01 805 aaKnown RBP16.79■□□□□ 0.28
TRAPPC12-218ENST00000479897 BTG4Q9NY30 223 aa16.79■□□□□ 0.28
TRAPPC12-218ENST00000479897 CRB1P82279 1406 aa16.79■□□□□ 0.28
TRAPPC12-218ENST00000479897 PARP4Q9UKK3 1724 aaKnown RBP16.77■□□□□ 0.28
TRAPPC12-218ENST00000479897 C8orf37Q96NL8 207 aa16.77■□□□□ 0.28
TRAPPC12-218ENST00000479897 MEX3CQ5U5Q3 659 aaKnown RBP16.76■□□□□ 0.27
TRAPPC12-218ENST00000479897 WDR43Q15061 677 aaKnown RBP eCLIP16.75■□□□□ 0.27
TRAPPC12-218ENST00000479897 UNC5CLQ8IV45 518 aa16.75■□□□□ 0.27
TRAPPC12-218ENST00000479897 NGLY1Q96IV0 654 aa16.75■□□□□ 0.27
TRAPPC12-218ENST00000479897 EYA1Q99502 592 aa16.75■□□□□ 0.27
TRAPPC12-218ENST00000479897 PKD1L3Q7Z443 1732 aa16.74■□□□□ 0.27
TRAPPC12-218ENST00000479897 LTV1Q96GA3 475 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC12-218ENST00000479897 ATRNO75882 1429 aa16.73■□□□□ 0.27
TRAPPC12-218ENST00000479897 NBPF6Q5VWK0 638 aa16.73■□□□□ 0.27
TRAPPC12-218ENST00000479897 ILDR1Q86SU0 546 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC12-218ENST00000479897 NBPF4Q96M43 638 aa16.73■□□□□ 0.27
TRAPPC12-218ENST00000479897 CARD10Q9BWT7 1032 aa16.73■□□□□ 0.27
TRAPPC12-218ENST00000479897 AFF2P51816 1311 aa16.72■□□□□ 0.27
TRAPPC12-218ENST00000479897 U2SURPO15042 1029 aaKnown RBP16.72■□□□□ 0.27
TRAPPC12-218ENST00000479897 FCHSD2O94868 740 aa16.72■□□□□ 0.27
TRAPPC12-218ENST00000479897 U2AF1L5P0DN76 240 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC12-218ENST00000479897 CSB-PGBD3P0DP91 1061 aa16.72■□□□□ 0.27
TRAPPC12-218ENST00000479897 U2AF1Q01081 240 aaKnown RBP eCLIP16.72■□□□□ 0.272e-6■□□□□ 9.2
TRAPPC12-218ENST00000479897 LARP1Q6PKG0 1096 aaKnown RBP16.72■□□□□ 0.27
TRAPPC12-218ENST00000479897 DISP2A7MBM2 1401 aa16.71■□□□□ 0.27
TRAPPC12-218ENST00000479897 EVA1CP58658 441 aa16.71■□□□□ 0.27
TRAPPC12-218ENST00000479897 VPS72Q15906 364 aa16.71■□□□□ 0.27
TRAPPC12-218ENST00000479897 TOM1L2Q6ZVM7 507 aa16.71■□□□□ 0.27
TRAPPC12-218ENST00000479897 RSPH6AQ9H0K4 717 aa16.71■□□□□ 0.27
TRAPPC12-218ENST00000479897 STRN4Q9NRL3 753 aa16.71■□□□□ 0.27
TRAPPC12-218ENST00000479897 USP21Q9UK80 565 aa16.71■□□□□ 0.27
TRAPPC12-218ENST00000479897 ADAMTS8Q9UP79 889 aa16.71■□□□□ 0.27
TRAPPC12-218ENST00000479897 GLI3P10071 1580 aa16.71■□□□□ 0.27
TRAPPC12-218ENST00000479897 SPATA31A5Q5VU36 1347 aa16.7■□□□□ 0.26
TRAPPC12-218ENST00000479897 SPATA31A7Q8IWB4 1347 aa16.7■□□□□ 0.26
TRAPPC12-218ENST00000479897 THSD7AQ9UPZ6 1657 aa16.7■□□□□ 0.26
TRAPPC12-218ENST00000479897 NLRP2Q9NX02 1062 aa16.7■□□□□ 0.26
TRAPPC12-218ENST00000479897 SHANK3Q9BYB0 1731 aa16.7■□□□□ 0.26
TRAPPC12-218ENST00000479897 MEGF6O75095 1541 aa16.7■□□□□ 0.26
TRAPPC12-218ENST00000479897 SPATA31A1Q5TZJ5 1347 aa16.7■□□□□ 0.26
TRAPPC12-218ENST00000479897 SULT6B1Q6IMI4 303 aa16.69■□□□□ 0.26
TRAPPC12-218ENST00000479897 AEBP1Q8IUX7 1158 aa16.69■□□□□ 0.26
TRAPPC12-218ENST00000479897 THRAP3Q9Y2W1 955 aaKnown RBP16.69■□□□□ 0.26
TRAPPC12-218ENST00000479897 OVOS2A0A0G2JMS6 1433 aa16.69■□□□□ 0.26
TRAPPC12-218ENST00000479897 LRRC37A3O60309 1634 aa16.68■□□□□ 0.26
TRAPPC12-218ENST00000479897 PNNQ9H307 717 aaKnown RBP16.68■□□□□ 0.26
TRAPPC12-218ENST00000479897 HMOX1P09601 288 aa16.67■□□□□ 0.26
TRAPPC12-218ENST00000479897 FAM9BQ8IZU0 186 aa16.67■□□□□ 0.26
TRAPPC12-218ENST00000479897 USHBP1Q8N6Y0 703 aa16.67■□□□□ 0.26
TRAPPC12-218ENST00000479897 PLEKHF1Q96S99 279 aa16.67■□□□□ 0.26
TRAPPC12-218ENST00000479897 PRKAR2BP31323 418 aa16.66■□□□□ 0.26
TRAPPC12-218ENST00000479897 ZNF772Q68DY9 489 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC12-218ENST00000479897 BARGINQ6ZT62 677 aa16.66■□□□□ 0.26
TRAPPC12-218ENST00000479897 TCP11L2Q8N4U5 519 aa16.66■□□□□ 0.26
TRAPPC12-218ENST00000479897 TRPC5Q9UL62 973 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC12-218ENST00000479897 DLG5Q8TDM6 1919 aa16.66■□□□□ 0.26
TRAPPC12-218ENST00000479897 RUNDC1Q96C34 613 aa16.65■□□□□ 0.26
TRAPPC12-218ENST00000479897 CDCA7Q9BWT1 371 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC12-218ENST00000479897 TNS2Q63HR2 1409 aa16.64■□□□□ 0.25
TRAPPC12-218ENST00000479897 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.64■□□□□ 0.25
TRAPPC12-218ENST00000479897 ADAMTS7Q9UKP4 1686 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms