RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 NGEFQ8N5V2 710 aa14.57□□□□□ -0.08
RAPGEF3-209ENST00000479866 PIP4K2BP78356 416 aa14.57□□□□□ -0.08
RAPGEF3-209ENST00000479866 SETBP1Q9Y6X0 1596 aa14.57□□□□□ -0.08
RAPGEF3-209ENST00000479866 PLEKHG3A1L390 1219 aa14.57□□□□□ -0.08
RAPGEF3-209ENST00000479866 STRN4Q9NRL3 753 aa14.57□□□□□ -0.08
RAPGEF3-209ENST00000479866 CCDC9Q9Y3X0 531 aaKnown RBP14.57□□□□□ -0.08
RAPGEF3-209ENST00000479866 EVA1CP58658 441 aa14.56□□□□□ -0.08
RAPGEF3-209ENST00000479866 NFE2L2Q16236 605 aa14.56□□□□□ -0.08
RAPGEF3-209ENST00000479866 SLC4A10Q6U841 1118 aa14.56□□□□□ -0.08
RAPGEF3-209ENST00000479866 IQGAP1P46940 1657 aa14.56□□□□□ -0.08
RAPGEF3-209ENST00000479866 NPHP4O75161 1426 aaPredicted RBP14.56□□□□□ -0.08
RAPGEF3-209ENST00000479866 CADPS2Q86UW7 1296 aa14.56□□□□□ -0.08
RAPGEF3-209ENST00000479866 EDC4Q6P2E9 1401 aaKnown RBP14.56□□□□□ -0.08
RAPGEF3-209ENST00000479866 TSPYL4Q9UJ04 414 aa14.55□□□□□ -0.08
RAPGEF3-209ENST00000479866 HSP90AA1P07900 732 aaKnown RBP14.55□□□□□ -0.08
RAPGEF3-209ENST00000479866 EIF2S2P20042 333 aaKnown RBP14.55□□□□□ -0.08
RAPGEF3-209ENST00000479866 TEFQ10587 303 aa14.55□□□□□ -0.08
RAPGEF3-209ENST00000479866 GNAI1P63096 354 aa14.54□□□□□ -0.08
RAPGEF3-209ENST00000479866 LAMC1P11047 1609 aa14.54□□□□□ -0.08
RAPGEF3-209ENST00000479866 C1orf141Q5JVX7 400 aa14.54□□□□□ -0.08
RAPGEF3-209ENST00000479866 WDR63Q8IWG1 891 aa14.54□□□□□ -0.08
RAPGEF3-209ENST00000479866 RIMS1Q86UR5 1692 aaKnown RBP14.54□□□□□ -0.08
RAPGEF3-209ENST00000479866 APBB1O00213 710 aa14.54□□□□□ -0.08
RAPGEF3-209ENST00000479866 IPO8O15397 1037 aaKnown RBP14.54□□□□□ -0.08
RAPGEF3-209ENST00000479866 ZKSCAN2Q63HK3 967 aa14.53□□□□□ -0.08
RAPGEF3-209ENST00000479866 LRRC59Q96AG4 307 aaKnown RBP14.53□□□□□ -0.08
RAPGEF3-209ENST00000479866 PRDM11Q9NQV5 511 aa14.53□□□□□ -0.08
RAPGEF3-209ENST00000479866 NAP1L2Q9ULW6 460 aaPredicted RBP14.53□□□□□ -0.08
RAPGEF3-209ENST00000479866 RAPGEF4Q8WZA2 1011 aa14.53□□□□□ -0.08
RAPGEF3-209ENST00000479866 TTC21AQ8NDW8 1320 aa14.53□□□□□ -0.08
RAPGEF3-209ENST00000479866 ANP32AP39687 249 aaKnown RBP14.53□□□□□ -0.08
RAPGEF3-209ENST00000479866 FAM135BQ49AJ0 1406 aa14.53□□□□□ -0.08
RAPGEF3-209ENST00000479866 PTPRUQ92729 1446 aa14.53□□□□□ -0.08
RAPGEF3-209ENST00000479866 HOMEZQ8IX15 550 aa14.52□□□□□ -0.08
RAPGEF3-209ENST00000479866 REREQ9P2R6 1566 aa14.52□□□□□ -0.09
RAPGEF3-209ENST00000479866 ZNF330Q9Y3S2 320 aaPredicted RBP14.52□□□□□ -0.09
RAPGEF3-209ENST00000479866 MSH6P52701 1360 aa14.52□□□□□ -0.09
RAPGEF3-209ENST00000479866 TMEM94Q12767 1356 aa14.52□□□□□ -0.09
RAPGEF3-209ENST00000479866 SKAP1Q86WV1 359 aa14.51□□□□□ -0.09
RAPGEF3-209ENST00000479866 KCNH5Q8NCM2 988 aa14.51□□□□□ -0.09
RAPGEF3-209ENST00000479866 FANCIQ9NVI1 1328 aa14.51□□□□□ -0.09
RAPGEF3-209ENST00000479866 GCP02774 474 aa14.5□□□□□ -0.09
RAPGEF3-209ENST00000479866 STK31Q9BXU1 1019 aa14.5□□□□□ -0.09
RAPGEF3-209ENST00000479866 BRPF3Q9ULD4 1205 aa14.5□□□□□ -0.09
RAPGEF3-209ENST00000479866 IL13P35225 146 aa14.5□□□□□ -0.09
RAPGEF3-209ENST00000479866 TWISTNBQ3B726 338 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF3-209ENST00000479866 ZNF530Q6P9A1 599 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF3-209ENST00000479866 EYA1Q99502 592 aa14.5□□□□□ -0.09
RAPGEF3-209ENST00000479866 NUTM2BA6NNL0 878 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF3-209ENST00000479866 NUTM2EB1AL46 878 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF3-209ENST00000479866 MS4A1P11836 297 aa14.5□□□□□ -0.09
RAPGEF3-209ENST00000479866 NUTM2AQ8IVF1 878 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF3-209ENST00000479866 ZNF335Q9H4Z2 1342 aaPredicted RBP14.5□□□□□ -0.09
RAPGEF3-209ENST00000479866 FER1L4A9Z1Z3 1794 aa14.5□□□□□ -0.09
RAPGEF3-209ENST00000479866 DZIP1LQ8IYY4 767 aaKnown RBP14.49□□□□□ -0.09
RAPGEF3-209ENST00000479866 GAS2L2Q8NHY3 880 aa14.49□□□□□ -0.09
RAPGEF3-209ENST00000479866 ZNF428Q96B54 188 aa14.49□□□□□ -0.09
RAPGEF3-209ENST00000479866 KIAA1210Q9ULL0 1709 aa14.49□□□□□ -0.09
RAPGEF3-209ENST00000479866 NOB1Q9ULX3 412 aaKnown RBP14.48□□□□□ -0.09
RAPGEF3-209ENST00000479866 TOM1L2Q6ZVM7 507 aa14.48□□□□□ -0.09
RAPGEF3-209ENST00000479866 TNNQ9UQP3 1299 aa14.48□□□□□ -0.09
RAPGEF3-209ENST00000479866 RARSP54136 660 aaKnown RBP14.47□□□□□ -0.09
RAPGEF3-209ENST00000479866 SSH1Q8WYL5 1049 aa14.47□□□□□ -0.09
RAPGEF3-209ENST00000479866 HOXC9P31274 260 aa14.47□□□□□ -0.09
RAPGEF3-209ENST00000479866 PLCD3Q8N3E9 789 aa14.47□□□□□ -0.09
RAPGEF3-209ENST00000479866 NEURL4Q96JN8 1562 aa14.47□□□□□ -0.09
RAPGEF3-209ENST00000479866 KRT24Q2M2I5 525 aa14.47□□□□□ -0.09
RAPGEF3-209ENST00000479866 MPRIPQ6WCQ1 1025 aa14.46□□□□□ -0.09
RAPGEF3-209ENST00000479866 USP6P35125 1406 aa14.46□□□□□ -0.09
RAPGEF3-209ENST00000479866 POLR1AO95602 1720 aaPredicted RBP14.46□□□□□ -0.09
RAPGEF3-209ENST00000479866 BRD2P25440 801 aaKnown RBP14.46□□□□□ -0.09
RAPGEF3-209ENST00000479866 ANKRD24Q8TF21 1146 aa14.46□□□□□ -0.09
RAPGEF3-209ENST00000479866 CDK11BP21127 795 aaKnown RBP14.46□□□□□ -0.1
RAPGEF3-209ENST00000479866 TRIM35Q9UPQ4 493 aa14.45□□□□□ -0.1
RAPGEF3-209ENST00000479866 BLMP54132 1417 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF3-209ENST00000479866 NPHP3Q7Z494 1330 aa14.45□□□□□ -0.1
RAPGEF3-209ENST00000479866 MTHFSDQ2M296 383 aaKnown RBP14.45□□□□□ -0.1
RAPGEF3-209ENST00000479866 DDX54Q8TDD1 881 aaKnown RBP14.45□□□□□ -0.1
RAPGEF3-209ENST00000479866 NKTRP30414 1462 aaKnown RBP14.45□□□□□ -0.1
RAPGEF3-209ENST00000479866 ATP7BP35670 1465 aa14.45□□□□□ -0.1
RAPGEF3-209ENST00000479866 PLEKHO1Q53GL0 409 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF3-209ENST00000479866 FLT4P35916 1363 aa14.44□□□□□ -0.1
RAPGEF3-209ENST00000479866 ADAMTS2O95450 1211 aa14.44□□□□□ -0.1
RAPGEF3-209ENST00000479866 SYTL4Q96C24 671 aaPredicted RBP14.44□□□□□ -0.1
RAPGEF3-209ENST00000479866 CEP170BQ9Y4F5 1589 aaPredicted RBP14.44□□□□□ -0.1
RAPGEF3-209ENST00000479866 MBIPQ9NS73 344 aa14.44□□□□□ -0.1
RAPGEF3-209ENST00000479866 C1orf115Q9H7X2 142 aa14.44□□□□□ -0.1
RAPGEF3-209ENST00000479866 KDM4FA0A1W2PPD8 638 aa14.43□□□□□ -0.1
RAPGEF3-209ENST00000479866 GNAT3A8MTJ3 354 aa14.43□□□□□ -0.1
RAPGEF3-209ENST00000479866 FKBP5Q13451 457 aaPredicted RBP14.43□□□□□ -0.1
RAPGEF3-209ENST00000479866 TSPYL6Q8N831 410 aa14.43□□□□□ -0.1
RAPGEF3-209ENST00000479866 SETD1BQ9UPS6 1966 aaKnown RBP14.42□□□□□ -0.1
RAPGEF3-209ENST00000479866 SLAIN2Q9P270 581 aa14.42□□□□□ -0.1
RAPGEF3-209ENST00000479866 ARHGEF28Q8N1W1 1705 aaKnown RBP14.42□□□□□ -0.1
RAPGEF3-209ENST00000479866 SLC4A2P04920 1241 aa14.42□□□□□ -0.1
RAPGEF3-209ENST00000479866 TATP17735 454 aaPredicted RBP14.42□□□□□ -0.1
RAPGEF3-209ENST00000479866 C3P01024 1663 aa14.41□□□□□ -0.1
RAPGEF3-209ENST00000479866 PIK3R4Q99570 1358 aa14.41□□□□□ -0.1
RAPGEF3-209ENST00000479866 ARID3AQ99856 593 aa14.41□□□□□ -0.1
RAPGEF3-209ENST00000479866 RWDD1Q9H446 243 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms