RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 HOXC9P31274 260 aa15.82■□□□□ 0.12
TM9SF4-206ENST00000479591 EIF4A2Q14240 407 aaKnown RBP15.82■□□□□ 0.12
TM9SF4-206ENST00000479591 NCBP3Q53F19 620 aaKnown RBP15.82■□□□□ 0.12
TM9SF4-206ENST00000479591 HSP90AB2PQ58FF8 381 aa15.82■□□□□ 0.12
TM9SF4-206ENST00000479591 CCDC146Q8IYE0 955 aa15.82■□□□□ 0.12
TM9SF4-206ENST00000479591 RGPD1P0DJD0 1748 aa15.82■□□□□ 0.12
TM9SF4-206ENST00000479591 ARHGEF25Q86VW2 580 aa15.81■□□□□ 0.12
TM9SF4-206ENST00000479591 IP6K1Q92551 441 aa15.81■□□□□ 0.12
TM9SF4-206ENST00000479591 ABCC6O95255 1503 aa15.8■□□□□ 0.12
TM9SF4-206ENST00000479591 APAF1O14727 1248 aa15.8■□□□□ 0.12
TM9SF4-206ENST00000479591 PDE3BQ13370 1112 aa15.8■□□□□ 0.12
TM9SF4-206ENST00000479591 MAPK8IP3Q9UPT6 1336 aa15.79■□□□□ 0.12
TM9SF4-206ENST00000479591 NEFMP07197 916 aa15.79■□□□□ 0.12
TM9SF4-206ENST00000479591 PLEKHF1Q96S99 279 aa15.79■□□□□ 0.12
TM9SF4-206ENST00000479591 LRRC59Q96AG4 307 aaKnown RBP15.78■□□□□ 0.12
TM9SF4-206ENST00000479591 RSPH6AQ9H0K4 717 aa15.78■□□□□ 0.12
TM9SF4-206ENST00000479591 CPDO75976 1380 aa15.77■□□□□ 0.12
TM9SF4-206ENST00000479591 TCP11L2Q8N4U5 519 aa15.77■□□□□ 0.12
TM9SF4-206ENST00000479591 ABCA3Q99758 1704 aa15.77■□□□□ 0.11
TM9SF4-206ENST00000479591 SALL2Q9Y467 1007 aaPredicted RBP15.76■□□□□ 0.11
TM9SF4-206ENST00000479591 PHLPP1O60346 1717 aa15.76■□□□□ 0.11
TM9SF4-206ENST00000479591 IGSF1Q8N6C5 1336 aa15.75■□□□□ 0.11
TM9SF4-206ENST00000479591 HMOX1P09601 288 aa15.75■□□□□ 0.11
TM9SF4-206ENST00000479591 PRKAR2BP31323 418 aa15.75■□□□□ 0.11
TM9SF4-206ENST00000479591 CCDC27Q2M243 656 aa15.75■□□□□ 0.11
TM9SF4-206ENST00000479591 COL22A1Q8NFW1 1626 aaPredicted RBP15.75■□□□□ 0.11
TM9SF4-206ENST00000479591 KDRP35968 1356 aa15.75■□□□□ 0.11
TM9SF4-206ENST00000479591 ZNF521Q96K83 1311 aa15.74■□□□□ 0.11
TM9SF4-206ENST00000479591 SENP3-EIF4A1A0A087X0R7 540 aa15.74■□□□□ 0.11
TM9SF4-206ENST00000479591 ZBTB7CA1YPR0 619 aa15.74■□□□□ 0.11
TM9SF4-206ENST00000479591 UBAP1LF5GYI3 381 aa15.74■□□□□ 0.11
TM9SF4-206ENST00000479591 PLEKHG5O94827 1062 aa15.74■□□□□ 0.11
TM9SF4-206ENST00000479591 SULT6B1Q6IMI4 303 aa15.74■□□□□ 0.11
TM9SF4-206ENST00000479591 COL18A1P39060 1754 aa15.74■□□□□ 0.11
TM9SF4-206ENST00000479591 COL16A1Q07092 1604 aaPredicted RBP15.73■□□□□ 0.11
TM9SF4-206ENST00000479591 ZC3H6P61129 1189 aaKnown RBP15.73■□□□□ 0.11
TM9SF4-206ENST00000479591 CABLES1Q8TDN4 633 aa15.73■□□□□ 0.11
TM9SF4-206ENST00000479591 EYA1Q99502 592 aa15.73■□□□□ 0.11
TM9SF4-206ENST00000479591 TMPOP42166 694 aaKnown RBP15.72■□□□□ 0.11
TM9SF4-206ENST00000479591 HAP1P54257 671 aaPredicted RBP15.72■□□□□ 0.11
TM9SF4-206ENST00000479591 FAM208AQ9UK61 1670 aaKnown RBP15.71■□□□□ 0.11
TM9SF4-206ENST00000479591 PIP4K2BP78356 416 aa15.71■□□□□ 0.11
TM9SF4-206ENST00000479591 GOLGA2Q08379 1002 aa15.71■□□□□ 0.11
TM9SF4-206ENST00000479591 LTV1Q96GA3 475 aaPredicted RBP15.71■□□□□ 0.11
TM9SF4-206ENST00000479591 RGPD5Q99666 1765 aa15.71■□□□□ 0.11
TM9SF4-206ENST00000479591 KIAA0232Q92628 1395 aa15.71■□□□□ 0.11
TM9SF4-206ENST00000479591 CAMTA1Q9Y6Y1 1673 aa15.7■□□□□ 0.1
TM9SF4-206ENST00000479591 NFE2L2Q16236 605 aa15.7■□□□□ 0.1
TM9SF4-206ENST00000479591 AEBP1Q8IUX7 1158 aa15.7■□□□□ 0.1
TM9SF4-206ENST00000479591 WWC1Q8IX03 1113 aa15.7■□□□□ 0.1
TM9SF4-206ENST00000479591 ANKRD24Q8TF21 1146 aa15.7■□□□□ 0.1
TM9SF4-206ENST00000479591 NCAPD2Q15021 1401 aa15.69■□□□□ 0.1
TM9SF4-206ENST00000479591 NEUROD2Q15784 382 aa15.69■□□□□ 0.1
TM9SF4-206ENST00000479591 WDR63Q8IWG1 891 aa15.69■□□□□ 0.1
TM9SF4-206ENST00000479591 AXIN2Q9Y2T1 843 aa15.69■□□□□ 0.1
TM9SF4-206ENST00000479591 RRP7AQ9Y3A4 280 aaKnown RBP15.69■□□□□ 0.1
TM9SF4-206ENST00000479591 ERBB3P21860 1342 aa15.68■□□□□ 0.1
TM9SF4-206ENST00000479591 LMO7Q8WWI1 1683 aa15.68■□□□□ 0.1
TM9SF4-206ENST00000479591 RIPK4P57078 832 aa15.68■□□□□ 0.1
TM9SF4-206ENST00000479591 PHACTR3Q96KR7 559 aa15.68■□□□□ 0.1
TM9SF4-206ENST00000479591 PRDM11Q9NQV5 511 aa15.68■□□□□ 0.1
TM9SF4-206ENST00000479591 RGPD2P0DJD1 1756 aa15.67■□□□□ 0.1
TM9SF4-206ENST00000479591 E9PSI1 815 aa15.67■□□□□ 0.1
TM9SF4-206ENST00000479591 LMOD3Q0VAK6 560 aa15.67■□□□□ 0.1
TM9SF4-206ENST00000479591 NBPF6Q5VWK0 638 aa15.66■□□□□ 0.1
TM9SF4-206ENST00000479591 CDCA7LQ96GN5 454 aa15.66■□□□□ 0.1
TM9SF4-206ENST00000479591 NBPF4Q96M43 638 aa15.66■□□□□ 0.1
TM9SF4-206ENST00000479591 DLG5Q8TDM6 1919 aa15.66■□□□□ 0.1
TM9SF4-206ENST00000479591 SLFN5Q08AF3 891 aa15.65■□□□□ 0.1
TM9SF4-206ENST00000479591 CHRNA2Q15822 529 aa15.65■□□□□ 0.1
TM9SF4-206ENST00000479591 GAS2L2Q8NHY3 880 aa15.65■□□□□ 0.1
TM9SF4-206ENST00000479591 TRIM35Q9UPQ4 493 aa15.65■□□□□ 0.1
TM9SF4-206ENST00000479591 TRMT2AQ8IZ69 625 aaKnown RBP15.64■□□□□ 0.09
TM9SF4-206ENST00000479591 COL14A1Q05707 1796 aaKnown RBP15.64■□□□□ 0.09
TM9SF4-206ENST00000479591 IL16Q14005 1332 aa15.64■□□□□ 0.09
TM9SF4-206ENST00000479591 PLEKHG2Q9H7P9 1386 aa15.63■□□□□ 0.09
TM9SF4-206ENST00000479591 CALD1Q05682 793 aaKnown RBP15.63■□□□□ 0.09
TM9SF4-206ENST00000479591 CSB-PGBD3P0DP91 1061 aa15.62■□□□□ 0.09
TM9SF4-206ENST00000479591 DUSP27Q5VZP5 1158 aa15.62■□□□□ 0.09
TM9SF4-206ENST00000479591 USHBP1Q8N6Y0 703 aa15.62■□□□□ 0.09
TM9SF4-206ENST00000479591 COL5A2P05997 1499 aaPredicted RBP15.62■□□□□ 0.09
TM9SF4-206ENST00000479591 MYH16Q9H6N6 1097 aa15.61■□□□□ 0.09
TM9SF4-206ENST00000479591 WDR17Q8IZU2 1322 aa15.61■□□□□ 0.09
TM9SF4-206ENST00000479591 JCADQ9P266 1359 aa15.61■□□□□ 0.09
TM9SF4-206ENST00000479591 HTATSF1O43719 755 aaKnown RBP15.6■□□□□ 0.09
TM9SF4-206ENST00000479591 MTHFSDQ2M296 383 aaKnown RBP15.6■□□□□ 0.09
TM9SF4-206ENST00000479591 AMOTQ4VCS5 1084 aa15.6■□□□□ 0.09
TM9SF4-206ENST00000479591 NLRP2Q9NX02 1062 aa15.6■□□□□ 0.09
TM9SF4-206ENST00000479591 FAM83GA6ND36 823 aa15.59■□□□□ 0.09
TM9SF4-206ENST00000479591 ILDR2Q71H61 639 aa15.59■□□□□ 0.09
TM9SF4-206ENST00000479591 SPINK5Q9NQ38 1064 aaPredicted RBP15.59■□□□□ 0.09
TM9SF4-206ENST00000479591 PLEKHO1Q53GL0 409 aaPredicted RBP15.58■□□□□ 0.08
TM9SF4-206ENST00000479591 EVA1CP58658 441 aa15.57■□□□□ 0.08
TM9SF4-206ENST00000479591 RAPGEF4Q8WZA2 1011 aa15.57■□□□□ 0.08
TM9SF4-206ENST00000479591 RTF1Q92541 710 aaKnown RBP15.57■□□□□ 0.08
TM9SF4-206ENST00000479591 GNAT3A8MTJ3 354 aa15.56■□□□□ 0.08
TM9SF4-206ENST00000479591 TATP17735 454 aaPredicted RBP15.56■□□□□ 0.08
TM9SF4-206ENST00000479591 TOM1L2Q6ZVM7 507 aa15.56■□□□□ 0.08
TM9SF4-206ENST00000479591 CARD10Q9BWT7 1032 aa15.56■□□□□ 0.08
TM9SF4-206ENST00000479591 IFT57Q9NWB7 429 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms