RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 PLEKHG1Q9ULL1 1385 aa10.75□□□□□ -0.69
USP30-206ENST00000479219 DLG5Q8TDM6 1919 aa10.75□□□□□ -0.69
USP30-206ENST00000479219 BECN1Q14457 450 aa10.74□□□□□ -0.69
USP30-206ENST00000479219 NALCNQ8IZF0 1738 aa10.74□□□□□ -0.69
USP30-206ENST00000479219 GNAI1P63096 354 aa10.74□□□□□ -0.69
USP30-206ENST00000479219 IFT57Q9NWB7 429 aa10.74□□□□□ -0.69
USP30-206ENST00000479219 NFKBIBQ15653 356 aa10.74□□□□□ -0.69
USP30-206ENST00000479219 ARHGAP45Q92619 1136 aa10.74□□□□□ -0.69
USP30-206ENST00000479219 SENP3Q9H4L4 574 aaPredicted RBP10.74□□□□□ -0.69
USP30-206ENST00000479219 PDZRN3Q9UPQ7 1066 aa10.73□□□□□ -0.69
USP30-206ENST00000479219 DIP2AQ14689 1571 aa10.73□□□□□ -0.69
USP30-206ENST00000479219 IL13P35225 146 aa10.73□□□□□ -0.69
USP30-206ENST00000479219 HAP1P54257 671 aaPredicted RBP10.73□□□□□ -0.69
USP30-206ENST00000479219 ITPRIPQ8IWB1 547 aa10.73□□□□□ -0.69
USP30-206ENST00000479219 RIMS1Q86UR5 1692 aaKnown RBP10.73□□□□□ -0.69
USP30-206ENST00000479219 TXNDC2Q86VQ3 553 aa10.72□□□□□ -0.69
USP30-206ENST00000479219 NOB1Q9ULX3 412 aaKnown RBP10.72□□□□□ -0.69
USP30-206ENST00000479219 PTCH1Q13635 1447 aa10.72□□□□□ -0.69
USP30-206ENST00000479219 ADAMTS13Q76LX8 1427 aa10.72□□□□□ -0.69
USP30-206ENST00000479219 PIK3R4Q99570 1358 aa10.71□□□□□ -0.69
USP30-206ENST00000479219 PKNOX2Q96KN3 472 aa10.71□□□□□ -0.69
USP30-206ENST00000479219 SLIT1O75093 1534 aa10.71□□□□□ -0.7
USP30-206ENST00000479219 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.71□□□□□ -0.7
USP30-206ENST00000479219 NME9Q86XW9 330 aa10.71□□□□□ -0.7
USP30-206ENST00000479219 ZBTB40Q9NUA8 1239 aa10.71□□□□□ -0.7
USP30-206ENST00000479219 TNNQ9UQP3 1299 aa10.71□□□□□ -0.7
USP30-206ENST00000479219 SMC5Q8IY18 1101 aa10.7□□□□□ -0.7
USP30-206ENST00000479219 PLEKHG3A1L390 1219 aa10.69□□□□□ -0.7
USP30-206ENST00000479219 ZNF853P0CG23 659 aa10.69□□□□□ -0.7
USP30-206ENST00000479219 EMILIN1Q9Y6C2 1016 aa10.69□□□□□ -0.7
USP30-206ENST00000479219 USP19O94966 1318 aa10.69□□□□□ -0.7
USP30-206ENST00000479219 KIF24Q5T7B8 1368 aa10.69□□□□□ -0.7
USP30-206ENST00000479219 ROBO2Q9HCK4 1378 aa10.69□□□□□ -0.7
USP30-206ENST00000479219 OVOS2A0A0J9YW53 1432 aa10.69□□□□□ -0.7
USP30-206ENST00000479219 OVOS2Q6IE36 1432 aa10.69□□□□□ -0.7
USP30-206ENST00000479219 FMN2Q9NZ56 1722 aa10.69□□□□□ -0.7
USP30-206ENST00000479219 TMEM57Q8N5G2 664 aa10.69□□□□□ -0.7
USP30-206ENST00000479219 CFAP44Q96MT7 982 aa10.69□□□□□ -0.7
USP30-206ENST00000479219 RGPD1P0DJD0 1748 aa10.69□□□□□ -0.7
USP30-206ENST00000479219 ARHGAP23Q9P227 1491 aa10.69□□□□□ -0.7
USP30-206ENST00000479219 TBC1D32Q96NH3 1257 aa10.68□□□□□ -0.7
USP30-206ENST00000479219 EID1Q9Y6B2 187 aa10.68□□□□□ -0.7
USP30-206ENST00000479219 TTC21BQ7Z4L5 1316 aa10.68□□□□□ -0.7
USP30-206ENST00000479219 USP6P35125 1406 aa10.68□□□□□ -0.7
USP30-206ENST00000479219 HMOX1P09601 288 aa10.68□□□□□ -0.7
USP30-206ENST00000479219 FER1L4A9Z1Z3 1794 aa10.67□□□□□ -0.7
USP30-206ENST00000479219 VAMP4O75379 141 aa10.67□□□□□ -0.7
USP30-206ENST00000479219 FAM43AQ8N2R8 423 aa10.67□□□□□ -0.7
USP30-206ENST00000479219 TTC21AQ8NDW8 1320 aa10.67□□□□□ -0.7
USP30-206ENST00000479219 PHACTR3Q96KR7 559 aa10.67□□□□□ -0.7
USP30-206ENST00000479219 API5Q9BZZ5 524 aaKnown RBP10.67□□□□□ -0.7
USP30-206ENST00000479219 USP31Q70CQ4 1352 aa10.67□□□□□ -0.7
USP30-206ENST00000479219 AEBP2Q6ZN18 517 aaPredicted RBP10.67□□□□□ -0.7
USP30-206ENST00000479219 GCC1Q96CN9 775 aa10.67□□□□□ -0.7
USP30-206ENST00000479219 PRR36Q9H6K5 1346 aa10.66□□□□□ -0.7
USP30-206ENST00000479219 MRPL50Q8N5N7 158 aaKnown RBP10.66□□□□□ -0.7
USP30-206ENST00000479219 ABCC4O15439 1325 aa10.66□□□□□ -0.7
USP30-206ENST00000479219 NUCB1Q02818 461 aa10.65□□□□□ -0.7
USP30-206ENST00000479219 MBIPQ9NS73 344 aa10.65□□□□□ -0.7
USP30-206ENST00000479219 TWISTNBQ3B726 338 aaPredicted RBP10.65□□□□□ -0.7
USP30-206ENST00000479219 USP54Q70EL1 1684 aa10.65□□□□□ -0.7
USP30-206ENST00000479219 ACEP12821 1306 aa10.65□□□□□ -0.71
USP30-206ENST00000479219 TBX22Q9Y458 520 aa10.64□□□□□ -0.71
USP30-206ENST00000479219 ARHGEF10O15013 1369 aa10.64□□□□□ -0.71
USP30-206ENST00000479219 KIAA0232Q92628 1395 aa10.64□□□□□ -0.71
USP30-206ENST00000479219 XRN1Q8IZH2 1706 aaKnown RBP10.64□□□□□ -0.71
USP30-206ENST00000479219 SEC24BO95487 1268 aa10.64□□□□□ -0.71
USP30-206ENST00000479219 SLC4A3P48751 1232 aa10.64□□□□□ -0.71
USP30-206ENST00000479219 SSH2Q76I76 1423 aa10.64□□□□□ -0.71
USP30-206ENST00000479219 RRS1Q15050 365 aaKnown RBP10.64□□□□□ -0.71
USP30-206ENST00000479219 PEAK1Q9H792 1746 aa10.64□□□□□ -0.71
USP30-206ENST00000479219 ANKARQ7Z5J8 1434 aa10.63□□□□□ -0.71
USP30-206ENST00000479219 ZBTB7BO15156 539 aaPredicted RBP10.63□□□□□ -0.71
USP30-206ENST00000479219 FBLN1P23142 703 aa10.62□□□□□ -0.71
USP30-206ENST00000479219 EIF4A2Q14240 407 aaKnown RBP10.62□□□□□ -0.71
USP30-206ENST00000479219 CHD1LQ86WJ1 897 aa10.62□□□□□ -0.71
USP30-206ENST00000479219 ZRANB1Q9UGI0 708 aa10.62□□□□□ -0.71
USP30-206ENST00000479219 PTPRUQ92729 1446 aa10.62□□□□□ -0.71
USP30-206ENST00000479219 SBNO1A3KN83 1393 aa10.61□□□□□ -0.71
USP30-206ENST00000479219 FLT4P35916 1363 aa10.61□□□□□ -0.71
USP30-206ENST00000479219 FRAT2O75474 233 aaPredicted RBP10.61□□□□□ -0.71
USP30-206ENST00000479219 LTKP29376 864 aa10.61□□□□□ -0.71
USP30-206ENST00000479219 BMP2KLQ5H9B9 411 aa10.61□□□□□ -0.71
USP30-206ENST00000479219 THEMISQ8N1K5 641 aaPredicted RBP10.61□□□□□ -0.71
USP30-206ENST00000479219 C22orf23Q9BZE7 217 aa10.61□□□□□ -0.71
USP30-206ENST00000479219 PTPRCP08575 1304 aa10.61□□□□□ -0.71
USP30-206ENST00000479219 NCKAP5LQ9HCH0 1330 aa10.61□□□□□ -0.71
USP30-206ENST00000479219 THUMPD2Q9BTF0 503 aaKnown RBP10.61□□□□□ -0.71
USP30-206ENST00000479219 SULT6B1Q6IMI4 303 aa10.6□□□□□ -0.71
USP30-206ENST00000479219 TSPYL6Q8N831 410 aa10.6□□□□□ -0.71
USP30-206ENST00000479219 CACNA1FO60840 1977 aa10.6□□□□□ -0.71
USP30-206ENST00000479219 CHL1O00533 1208 aa10.6□□□□□ -0.71
USP30-206ENST00000479219 PIK3C2AO00443 1686 aa10.59□□□□□ -0.71
USP30-206ENST00000479219 KDRP35968 1356 aa10.59□□□□□ -0.71
USP30-206ENST00000479219 RGPD8O14715 1765 aaPredicted RBP10.59□□□□□ -0.71
USP30-206ENST00000479219 AMOTL2Q9Y2J4 779 aa10.59□□□□□ -0.71
USP30-206ENST00000479219 INTS3Q68E01 1043 aaKnown RBP10.59□□□□□ -0.71
USP30-206ENST00000479219 C8orf58Q8NAV2 365 aa10.59□□□□□ -0.71
USP30-206ENST00000479219 RBM25P49756 843 aaKnown RBP10.58□□□□□ -0.72
USP30-206ENST00000479219 TBC1D2Q9BYX2 928 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms