RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 PPP1R1BQ9UD71 204 aaPredicted RBP15.92■□□□□ 0.14
HDLBP-237ENST00000479169 AXIN2Q9Y2T1 843 aa15.92■□□□□ 0.14
HDLBP-237ENST00000479169 TRPM1Q7Z4N2 1603 aa15.91■□□□□ 0.14
HDLBP-237ENST00000479169 YY1P25490 414 aa15.91■□□□□ 0.14
HDLBP-237ENST00000479169 CPSF1Q10570 1443 aaKnown RBP15.91■□□□□ 0.14
HDLBP-237ENST00000479169 C11orf95C9JLR9 678 aaPredicted RBP15.9■□□□□ 0.14
HDLBP-237ENST00000479169 WDR17Q8IZU2 1322 aa15.9■□□□□ 0.14
HDLBP-237ENST00000479169 PLSCR1O15162 318 aa15.89■□□□□ 0.13
HDLBP-237ENST00000479169 SOX12O15370 315 aa15.89■□□□□ 0.13
HDLBP-237ENST00000479169 MARCH10Q8NA82 808 aaPredicted RBP15.89■□□□□ 0.13
HDLBP-237ENST00000479169 PDGFDQ9GZP0 370 aaPredicted RBP15.89■□□□□ 0.13
HDLBP-237ENST00000479169 NINLQ9Y2I6 1382 aa15.88■□□□□ 0.13
HDLBP-237ENST00000479169 BCL11BQ9C0K0 894 aaPredicted RBP15.88■□□□□ 0.13
HDLBP-237ENST00000479169 EVC2Q86UK5 1308 aa15.88■□□□□ 0.13
HDLBP-237ENST00000479169 MYOM1P52179 1685 aa15.87■□□□□ 0.13
HDLBP-237ENST00000479169 ARHGEF25Q86VW2 580 aa15.87■□□□□ 0.13
HDLBP-237ENST00000479169 L3MBTL2Q969R5 705 aa15.87■□□□□ 0.13
HDLBP-237ENST00000479169 NFAT5O94916 1531 aa15.87■□□□□ 0.13
HDLBP-237ENST00000479169 TTC21BQ7Z4L5 1316 aa15.87■□□□□ 0.13
HDLBP-237ENST00000479169 KAT6BQ8WYB5 2073 aa15.87■□□□□ 0.13
HDLBP-237ENST00000479169 PROM2Q8N271 834 aa15.86■□□□□ 0.13
HDLBP-237ENST00000479169 UTRNP46939 3433 aa15.85■□□□□ 0.13
HDLBP-237ENST00000479169 CSB-PGBD3P0DP91 1061 aa15.85■□□□□ 0.13
HDLBP-237ENST00000479169 MON2Q7Z3U7 1717 aa15.85■□□□□ 0.13
HDLBP-237ENST00000479169 BCL9O00512 1426 aa15.85■□□□□ 0.13
HDLBP-237ENST00000479169 ZBTB7AO95365 584 aa15.84■□□□□ 0.13
HDLBP-237ENST00000479169 CARD10Q9BWT7 1032 aa15.84■□□□□ 0.13
HDLBP-237ENST00000479169 CDCA7Q9BWT1 371 aaPredicted RBP15.83■□□□□ 0.12
HDLBP-237ENST00000479169 KCNH5Q8NCM2 988 aa15.82■□□□□ 0.12
HDLBP-237ENST00000479169 SIN3AQ96ST3 1273 aa15.82■□□□□ 0.12
HDLBP-237ENST00000479169 ZNF692Q9BU19 519 aaPredicted RBP15.82■□□□□ 0.12
HDLBP-237ENST00000479169 TTC21AQ8NDW8 1320 aa15.82■□□□□ 0.12
HDLBP-237ENST00000479169 ROCK2O75116 1388 aaKnown RBP15.82■□□□□ 0.12
HDLBP-237ENST00000479169 TNS2Q63HR2 1409 aa15.82■□□□□ 0.12
HDLBP-237ENST00000479169 NHSQ6T4R5 1651 aa15.82■□□□□ 0.12
HDLBP-237ENST00000479169 LTN1O94822 1766 aa15.82■□□□□ 0.12
HDLBP-237ENST00000479169 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
HDLBP-237ENST00000479169 TXNRD1Q16881 649 aa15.81■□□□□ 0.12
HDLBP-237ENST00000479169 KTN1Q86UP2 1357 aaKnown RBP15.81■□□□□ 0.12
HDLBP-237ENST00000479169 ATF5Q9Y2D1 282 aaPredicted RBP15.81■□□□□ 0.12
HDLBP-237ENST00000479169 EXOC5O00471 708 aa15.8■□□□□ 0.12
HDLBP-237ENST00000479169 PTGER2P43116 358 aa15.8■□□□□ 0.12
HDLBP-237ENST00000479169 USP54Q70EL1 1684 aa15.79■□□□□ 0.12
HDLBP-237ENST00000479169 ABCC6O95255 1503 aa15.79■□□□□ 0.12
HDLBP-237ENST00000479169 CCDC7Q96M83 1385 aa15.79■□□□□ 0.12
HDLBP-237ENST00000479169 STK32BQ9NY57 414 aa15.79■□□□□ 0.12
HDLBP-237ENST00000479169 BTAF1O14981 1849 aa15.79■□□□□ 0.12
HDLBP-237ENST00000479169 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.78■□□□□ 0.12
HDLBP-237ENST00000479169 NEUROD1Q13562 356 aa15.77■□□□□ 0.12
HDLBP-237ENST00000479169 SLC15A2Q16348 729 aa15.77■□□□□ 0.12
HDLBP-237ENST00000479169 ACSBG1Q96GR2 724 aa15.77■□□□□ 0.12
HDLBP-237ENST00000479169 CHD4Q14839 1912 aa15.76■□□□□ 0.11
HDLBP-237ENST00000479169 PAPPAQ13219 1627 aa15.76■□□□□ 0.11
HDLBP-237ENST00000479169 NME9Q86XW9 330 aa15.76■□□□□ 0.11
HDLBP-237ENST00000479169 NLRP2Q9NX02 1062 aa15.75■□□□□ 0.11
HDLBP-237ENST00000479169 CD163L1Q9NR16 1453 aa15.75■□□□□ 0.11
HDLBP-237ENST00000479169 ERBB3P21860 1342 aa15.74■□□□□ 0.11
HDLBP-237ENST00000479169 FHDC1Q9C0D6 1143 aaPredicted RBP15.74■□□□□ 0.11
HDLBP-237ENST00000479169 USP31Q70CQ4 1352 aa15.74■□□□□ 0.11
HDLBP-237ENST00000479169 SBNO2Q9Y2G9 1366 aa15.74■□□□□ 0.11
HDLBP-237ENST00000479169 SYT17Q9BSW7 474 aa15.73■□□□□ 0.11
HDLBP-237ENST00000479169 MTFR1LQ9H019 292 aa15.73■□□□□ 0.11
HDLBP-237ENST00000479169 SGIP1Q9BQI5 828 aa15.72■□□□□ 0.11
HDLBP-237ENST00000479169 IL2RBP14784 551 aa15.71■□□□□ 0.11
HDLBP-237ENST00000479169 ANKRD24Q8TF21 1146 aa15.71■□□□□ 0.11
HDLBP-237ENST00000479169 TUBGCP6Q96RT7 1819 aa15.71■□□□□ 0.1
HDLBP-237ENST00000479169 GOLGB1Q14789 3259 aaKnown RBP15.7■□□□□ 0.1
HDLBP-237ENST00000479169 ZNF827Q17R98 1081 aa15.7■□□□□ 0.1
HDLBP-237ENST00000479169 TMC1Q8TDI8 760 aa15.7■□□□□ 0.1
HDLBP-237ENST00000479169 ZNF784Q8NCA9 323 aaPredicted RBP15.69■□□□□ 0.1
HDLBP-237ENST00000479169 SLC12A5Q9H2X9 1139 aa15.69■□□□□ 0.1
HDLBP-237ENST00000479169 LRRC4BQ9NT99 713 aa15.69■□□□□ 0.1
HDLBP-237ENST00000479169 RGPD2P0DJD1 1756 aa15.69■□□□□ 0.1
HDLBP-237ENST00000479169 EDC4Q6P2E9 1401 aaKnown RBP15.68■□□□□ 0.1
HDLBP-237ENST00000479169 FAM208AQ9UK61 1670 aaKnown RBP15.68■□□□□ 0.1
HDLBP-237ENST00000479169 ARXQ96QS3 562 aa15.68■□□□□ 0.1
HDLBP-237ENST00000479169 QSER1Q2KHR3 1735 aa15.68■□□□□ 0.1
HDLBP-237ENST00000479169 A0A1W2PP64 1363 aa15.67■□□□□ 0.1
HDLBP-237ENST00000479169 HDGFL2Q7Z4V5 671 aaPredicted RBP15.67■□□□□ 0.1
HDLBP-237ENST00000479169 CARD11Q9BXL7 1154 aa15.67■□□□□ 0.1
HDLBP-237ENST00000479169 DOT1LQ8TEK3 1739 aa15.66■□□□□ 0.1
HDLBP-237ENST00000479169 SHANK3Q9BYB0 1731 aa15.65■□□□□ 0.1
HDLBP-237ENST00000479169 LTV1Q96GA3 475 aaPredicted RBP15.65■□□□□ 0.1
HDLBP-237ENST00000479169 COL24A1Q17RW2 1714 aa15.64■□□□□ 0.09
HDLBP-237ENST00000479169 DDX54Q8TDD1 881 aaKnown RBP15.64■□□□□ 0.09
HDLBP-237ENST00000479169 MAP3K5Q99683 1374 aa15.63■□□□□ 0.09
HDLBP-237ENST00000479169 LY75O60449 1722 aa15.63■□□□□ 0.09
HDLBP-237ENST00000479169 KCNQ4P56696 695 aa15.63■□□□□ 0.09
HDLBP-237ENST00000479169 IP6K1Q92551 441 aa15.63■□□□□ 0.09
HDLBP-237ENST00000479169 AKT1S1Q96B36 256 aa15.63■□□□□ 0.09
HDLBP-237ENST00000479169 TERF2IPQ9NYB0 399 aa15.63■□□□□ 0.09
HDLBP-237ENST00000479169 FBLN1P23142 703 aa15.61■□□□□ 0.09
HDLBP-237ENST00000479169 KLHL34Q8N239 644 aa15.61■□□□□ 0.09
HDLBP-237ENST00000479169 PNPLA7Q6ZV29 1317 aa15.61■□□□□ 0.09
HDLBP-237ENST00000479169 PRIM1P49642 420 aaKnown RBP15.6■□□□□ 0.09
HDLBP-237ENST00000479169 SLC27A3Q5K4L6 730 aa15.6■□□□□ 0.09
HDLBP-237ENST00000479169 SYTL4Q96C24 671 aaPredicted RBP15.6■□□□□ 0.09
HDLBP-237ENST00000479169 NSD2O96028 1365 aa15.6■□□□□ 0.09
HDLBP-237ENST00000479169 MEGF6O75095 1541 aa15.59■□□□□ 0.09
HDLBP-237ENST00000479169 GPR162Q16538 588 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms