RNA–Protein interactions for RNA: ENST00000479107.1

HLA-DPA1-247, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 5,025 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-247ENST00000479107 KIF3AQ9Y496 699 aa10.47□□□□□ -0.73
HLA-DPA1-247ENST00000479107 INTS3Q68E01 1043 aaKnown RBP10.47□□□□□ -0.73
HLA-DPA1-247ENST00000479107 SPON1Q9HCB6 807 aa10.47□□□□□ -0.73
HLA-DPA1-247ENST00000479107 BTG4Q9NY30 223 aa10.47□□□□□ -0.73
HLA-DPA1-247ENST00000479107 PDZRN3Q9UPQ7 1066 aa10.47□□□□□ -0.73
HLA-DPA1-247ENST00000479107 SEPT12Q8IYM1 358 aa10.47□□□□□ -0.73
HLA-DPA1-247ENST00000479107 DDB1Q16531 1140 aa10.46□□□□□ -0.73
HLA-DPA1-247ENST00000479107 LNPKQ9C0E8 428 aa10.46□□□□□ -0.73
HLA-DPA1-247ENST00000479107 NINLQ9Y2I6 1382 aa10.46□□□□□ -0.73
HLA-DPA1-247ENST00000479107 UQCRHLA0A096LP55 91 aa10.46□□□□□ -0.73
HLA-DPA1-247ENST00000479107 UQCRHP07919 91 aa10.46□□□□□ -0.73
HLA-DPA1-247ENST00000479107 UNC5CLQ8IV45 518 aa10.46□□□□□ -0.73
HLA-DPA1-247ENST00000479107 RUNDC1Q96C34 613 aa10.46□□□□□ -0.73
HLA-DPA1-247ENST00000479107 CHMP4AQ9BY43 222 aa10.46□□□□□ -0.73
HLA-DPA1-247ENST00000479107 ANKRD30BQ9BXX2 1392 aa10.46□□□□□ -0.73
HLA-DPA1-247ENST00000479107 SETQ01105 290 aaPredicted RBP10.46□□□□□ -0.74
HLA-DPA1-247ENST00000479107 MAP3K4Q9Y6R4 1608 aa10.46□□□□□ -0.74
HLA-DPA1-247ENST00000479107 AGLP35573 1532 aa10.45□□□□□ -0.74
HLA-DPA1-247ENST00000479107 DUOX2Q9NRD8 1548 aa10.45□□□□□ -0.74
HLA-DPA1-247ENST00000479107 CDC45O75419 566 aa10.45□□□□□ -0.74
HLA-DPA1-247ENST00000479107 RNF214Q8ND24 703 aa10.45□□□□□ -0.74
HLA-DPA1-247ENST00000479107 CCDC34Q96HJ3 373 aa10.45□□□□□ -0.74
HLA-DPA1-247ENST00000479107 COG3Q96JB2 828 aa10.45□□□□□ -0.74
HLA-DPA1-247ENST00000479107 KDM5DQ9BY66 1539 aa10.45□□□□□ -0.74
HLA-DPA1-247ENST00000479107 MYO5CQ9NQX4 1742 aa10.45□□□□□ -0.74
HLA-DPA1-247ENST00000479107 KCNH5Q8NCM2 988 aa10.45□□□□□ -0.74
HLA-DPA1-247ENST00000479107 ZMYND15Q9H091 742 aa10.45□□□□□ -0.74
HLA-DPA1-247ENST00000479107 YY1P25490 414 aa10.45□□□□□ -0.74
HLA-DPA1-247ENST00000479107 HDAC5Q9UQL6 1122 aa10.45□□□□□ -0.74
HLA-DPA1-247ENST00000479107 PSDA5PKW4 1024 aaPredicted RBP10.45□□□□□ -0.74
HLA-DPA1-247ENST00000479107 DDX54Q8TDD1 881 aaKnown RBP10.45□□□□□ -0.74
HLA-DPA1-247ENST00000479107 ARGLU1Q9NWB6 273 aaPredicted RBP10.45□□□□□ -0.74
HLA-DPA1-247ENST00000479107 IFT57Q9NWB7 429 aa10.45□□□□□ -0.74
HLA-DPA1-247ENST00000479107 SUPT6HQ7KZ85 1726 aaKnown RBP10.45□□□□□ -0.74
HLA-DPA1-247ENST00000479107 PLA2R1Q13018 1463 aa10.44□□□□□ -0.74
HLA-DPA1-247ENST00000479107 ARHGEF10O15013 1369 aa10.44□□□□□ -0.74
HLA-DPA1-247ENST00000479107 SPATA31D1Q6ZQQ2 1576 aa10.44□□□□□ -0.74
HLA-DPA1-247ENST00000479107 LETM1O95202 739 aaPredicted RBP10.44□□□□□ -0.74
HLA-DPA1-247ENST00000479107 HSP90B1P14625 803 aaKnown RBP10.44□□□□□ -0.74
HLA-DPA1-247ENST00000479107 CDCA7Q9BWT1 371 aaPredicted RBP10.44□□□□□ -0.74
HLA-DPA1-247ENST00000479107 SLC4A10Q6U841 1118 aa10.44□□□□□ -0.74
HLA-DPA1-247ENST00000479107 RILPL2Q969X0 211 aa10.44□□□□□ -0.74
HLA-DPA1-247ENST00000479107 TSPY26PQ9H489 355 aa10.44□□□□□ -0.74
HLA-DPA1-247ENST00000479107 API5Q9BZZ5 524 aaKnown RBP10.43□□□□□ -0.74
HLA-DPA1-247ENST00000479107 G3V3G9 751 aa10.43□□□□□ -0.74
HLA-DPA1-247ENST00000479107 DCAF8Q5TAQ9 597 aa10.43□□□□□ -0.74
HLA-DPA1-247ENST00000479107 RABEP1Q15276 862 aa10.43□□□□□ -0.74
HLA-DPA1-247ENST00000479107 BRINP3Q76B58 766 aa10.43□□□□□ -0.74
HLA-DPA1-247ENST00000479107 WAPLQ7Z5K2 1190 aa10.43□□□□□ -0.74
HLA-DPA1-247ENST00000479107 HFM1A2PYH4 1435 aa10.43□□□□□ -0.74
HLA-DPA1-247ENST00000479107 PZPP20742 1482 aa10.43□□□□□ -0.74
HLA-DPA1-247ENST00000479107 NOM1Q5C9Z4 860 aaKnown RBP10.42□□□□□ -0.74
HLA-DPA1-247ENST00000479107 DAPK1P53355 1430 aa10.42□□□□□ -0.74
HLA-DPA1-247ENST00000479107 PRPF40AO75400 957 aaKnown RBP10.42□□□□□ -0.74
HLA-DPA1-247ENST00000479107 SF3A1Q15459 793 aaKnown RBP10.42□□□□□ -0.74
HLA-DPA1-247ENST00000479107 GJD4Q96KN9 370 aaPredicted RBP10.42□□□□□ -0.74
HLA-DPA1-247ENST00000479107 ABCC1P33527 1531 aa10.42□□□□□ -0.74
HLA-DPA1-247ENST00000479107 ORAI2Q96SN7 254 aa10.42□□□□□ -0.74
HLA-DPA1-247ENST00000479107 TAF3Q5VWG9 929 aa10.42□□□□□ -0.74
HLA-DPA1-247ENST00000479107 CWC22Q9HCG8 908 aaKnown RBP10.42□□□□□ -0.74
HLA-DPA1-247ENST00000479107 KIF13AQ9H1H9 1805 aa10.41□□□□□ -0.74
HLA-DPA1-247ENST00000479107 CABLES1Q8TDN4 633 aa10.41□□□□□ -0.74
HLA-DPA1-247ENST00000479107 ROCK1Q13464 1354 aa10.41□□□□□ -0.74
HLA-DPA1-247ENST00000479107 H3BQV1 296 aa10.41□□□□□ -0.74
HLA-DPA1-247ENST00000479107 IFFO2Q5TF58 517 aa10.41□□□□□ -0.74
HLA-DPA1-247ENST00000479107 CHMP4CQ96CF2 233 aa10.41□□□□□ -0.74
HLA-DPA1-247ENST00000479107 TFCP2L1Q9NZI6 479 aa10.41□□□□□ -0.74
HLA-DPA1-247ENST00000479107 CLCN1P35523 988 aa10.41□□□□□ -0.74
HLA-DPA1-247ENST00000479107 PLEKHG1Q9ULL1 1385 aa10.41□□□□□ -0.74
HLA-DPA1-247ENST00000479107 CCAR2Q8N163 923 aaKnown RBP10.41□□□□□ -0.74
HLA-DPA1-247ENST00000479107 ZNF692Q9BU19 519 aaPredicted RBP10.41□□□□□ -0.74
HLA-DPA1-247ENST00000479107 PIK3R4Q99570 1358 aa10.4□□□□□ -0.74
HLA-DPA1-247ENST00000479107 TTC37Q6PGP7 1564 aa10.4□□□□□ -0.74
HLA-DPA1-247ENST00000479107 K7ELQ4 463 aaPredicted RBP10.4□□□□□ -0.74
HLA-DPA1-247ENST00000479107 TATP17735 454 aaPredicted RBP10.4□□□□□ -0.74
HLA-DPA1-247ENST00000479107 CHRNA2Q15822 529 aa10.4□□□□□ -0.74
HLA-DPA1-247ENST00000479107 C1orf141Q5JVX7 400 aa10.4□□□□□ -0.74
HLA-DPA1-247ENST00000479107 HOMER1Q86YM7 354 aa10.4□□□□□ -0.74
HLA-DPA1-247ENST00000479107 MCM2P49736 904 aa10.4□□□□□ -0.74
HLA-DPA1-247ENST00000479107 DDX17Q92841 729 aaKnown RBP10.4□□□□□ -0.74
HLA-DPA1-247ENST00000479107 PPP2R1AP30153 589 aa10.4□□□□□ -0.74
HLA-DPA1-247ENST00000479107 SASS6Q6UVJ0 657 aa10.4□□□□□ -0.74
HLA-DPA1-247ENST00000479107 PAXIP1Q6ZW49 1069 aaPredicted RBP10.4□□□□□ -0.74
HLA-DPA1-247ENST00000479107 CWC15Q9P013 229 aaKnown RBP10.4□□□□□ -0.74
HLA-DPA1-247ENST00000479107 SMC3Q9UQE7 1217 aa10.4□□□□□ -0.74
HLA-DPA1-247ENST00000479107 ELL2O00472 640 aaPredicted RBP10.4□□□□□ -0.75
HLA-DPA1-247ENST00000479107 NOC3LQ8WTT2 800 aaKnown RBP10.4□□□□□ -0.75
HLA-DPA1-247ENST00000479107 ANO2Q9NQ90 1003 aa10.39□□□□□ -0.75
HLA-DPA1-247ENST00000479107 BCAR3O75815 825 aa10.39□□□□□ -0.75
HLA-DPA1-247ENST00000479107 R3HDM1Q15032 1099 aaKnown RBP10.39□□□□□ -0.75
HLA-DPA1-247ENST00000479107 POTEAQ6S8J7 498 aa10.39□□□□□ -0.75
HLA-DPA1-247ENST00000479107 FAM184AQ8NB25 1140 aa10.39□□□□□ -0.75
HLA-DPA1-247ENST00000479107 CFAP70Q5T0N1 1121 aa10.39□□□□□ -0.75
HLA-DPA1-247ENST00000479107 MNS1Q8NEH6 495 aa10.39□□□□□ -0.75
HLA-DPA1-247ENST00000479107 RUFY2Q8WXA3 655 aa10.39□□□□□ -0.75
HLA-DPA1-247ENST00000479107 AK7Q96M32 723 aa10.39□□□□□ -0.75
HLA-DPA1-247ENST00000479107 FER1L4A9Z1Z3 1794 aa10.39□□□□□ -0.75
HLA-DPA1-247ENST00000479107 EFCAB6Q5THR3 1501 aa10.39□□□□□ -0.75
HLA-DPA1-247ENST00000479107 ITSN2Q9NZM3 1697 aa10.39□□□□□ -0.75
HLA-DPA1-247ENST00000479107 BICD2Q8TD16 824 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms