RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 XPCQ01831 940 aaPredicted RBP5.35□□□□□ -1.55
USP25-208ENST00000478932 SULT6B1Q6IMI4 303 aa5.35□□□□□ -1.55
USP25-208ENST00000478932 ABTB2Q8N961 1025 aa5.35□□□□□ -1.55
USP25-208ENST00000478932 PANK1Q8TE04 598 aa5.35□□□□□ -1.55
USP25-208ENST00000478932 AKT1S1Q96B36 256 aa5.35□□□□□ -1.55
USP25-208ENST00000478932 MYH16Q9H6N6 1097 aa5.35□□□□□ -1.55
USP25-208ENST00000478932 FAM83GA6ND36 823 aa5.35□□□□□ -1.55
USP25-208ENST00000478932 CANXP27824 592 aaKnown RBP5.35□□□□□ -1.55
USP25-208ENST00000478932 EXOSC9Q06265 439 aaKnown RBP5.35□□□□□ -1.55
USP25-208ENST00000478932 DCTN1Q14203 1278 aa5.35□□□□□ -1.55
USP25-208ENST00000478932 EIF4A2Q14240 407 aaKnown RBP5.35□□□□□ -1.55
USP25-208ENST00000478932 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.35□□□□□ -1.55
USP25-208ENST00000478932 ORAI2Q96SN7 254 aa5.35□□□□□ -1.55
USP25-208ENST00000478932 TNNQ9UQP3 1299 aa5.35□□□□□ -1.55
USP25-208ENST00000478932 MAP3K19Q56UN5 1328 aa5.35□□□□□ -1.55
USP25-208ENST00000478932 PTCH1Q13635 1447 aa5.35□□□□□ -1.55
USP25-208ENST00000478932 CDC42BPGQ6DT37 1551 aa5.34□□□□□ -1.55
USP25-208ENST00000478932 ELL2O00472 640 aaPredicted RBP5.34□□□□□ -1.55
USP25-208ENST00000478932 PNNQ9H307 717 aaKnown RBP5.34□□□□□ -1.55
USP25-208ENST00000478932 COG6Q9Y2V7 657 aa5.34□□□□□ -1.55
USP25-208ENST00000478932 FANCIQ9NVI1 1328 aa5.34□□□□□ -1.55
USP25-208ENST00000478932 AATKQ6ZMQ8 1374 aa5.34□□□□□ -1.55
USP25-208ENST00000478932 IQSEC2Q5JU85 1478 aa5.34□□□□□ -1.55
USP25-208ENST00000478932 PSME1Q06323 249 aa5.34□□□□□ -1.55
USP25-208ENST00000478932 PROSER2Q86WR7 435 aaPredicted RBP5.34□□□□□ -1.55
USP25-208ENST00000478932 PHF8Q9UPP1 1060 aa5.34□□□□□ -1.55
USP25-208ENST00000478932 KNDC1Q76NI1 1749 aa5.33□□□□□ -1.56
USP25-208ENST00000478932 RGPD8O14715 1765 aaPredicted RBP5.33□□□□□ -1.56
USP25-208ENST00000478932 RLBP1P12271 317 aa5.33□□□□□ -1.56
USP25-208ENST00000478932 AMPHP49418 695 aa5.33□□□□□ -1.56
USP25-208ENST00000478932 LMOD2Q6P5Q4 547 aa5.33□□□□□ -1.56
USP25-208ENST00000478932 PIK3R4Q99570 1358 aa5.33□□□□□ -1.56
USP25-208ENST00000478932 SSH2Q76I76 1423 aa5.33□□□□□ -1.56
USP25-208ENST00000478932 NFE2L2Q16236 605 aa5.33□□□□□ -1.56
USP25-208ENST00000478932 CHRDL2Q6WN34 429 aa5.33□□□□□ -1.56
USP25-208ENST00000478932 LTV1Q96GA3 475 aaPredicted RBP5.33□□□□□ -1.56
USP25-208ENST00000478932 ADAMTSL3P82987 1691 aa5.33□□□□□ -1.56
USP25-208ENST00000478932 DIP2AQ14689 1571 aa5.32□□□□□ -1.56
USP25-208ENST00000478932 TTC21AQ8NDW8 1320 aa5.32□□□□□ -1.56
USP25-208ENST00000478932 TCERG1O14776 1098 aaKnown RBP5.32□□□□□ -1.56
USP25-208ENST00000478932 SSH1Q8WYL5 1049 aa5.32□□□□□ -1.56
USP25-208ENST00000478932 KIF20BQ96Q89 1820 aa5.32□□□□□ -1.56
USP25-208ENST00000478932 OVOS2A0A0J9YW53 1432 aa5.32□□□□□ -1.56
USP25-208ENST00000478932 NPHP4O75161 1426 aaPredicted RBP5.32□□□□□ -1.56
USP25-208ENST00000478932 OVOS2Q6IE36 1432 aa5.32□□□□□ -1.56
USP25-208ENST00000478932 ZBTB7CA1YPR0 619 aa5.32□□□□□ -1.56
USP25-208ENST00000478932 PDE3AQ14432 1141 aa5.32□□□□□ -1.56
USP25-208ENST00000478932 MCM10Q7L590 875 aa5.32□□□□□ -1.56
USP25-208ENST00000478932 TSPYL6Q8N831 410 aa5.32□□□□□ -1.56
USP25-208ENST00000478932 EYA1Q99502 592 aa5.32□□□□□ -1.56
USP25-208ENST00000478932 SMC4Q9NTJ3 1288 aa5.32□□□□□ -1.56
USP25-208ENST00000478932 POTEMA6NI47 508 aa5.31□□□□□ -1.56
USP25-208ENST00000478932 DDX17Q92841 729 aaKnown RBP5.31□□□□□ -1.56
USP25-208ENST00000478932 ANKRD26Q9UPS8 1709 aa5.31□□□□□ -1.56
USP25-208ENST00000478932 ADGRB2O60241 1585 aa5.31□□□□□ -1.56
USP25-208ENST00000478932 LRRC7Q96NW7 1537 aa5.31□□□□□ -1.56
USP25-208ENST00000478932 CDK12Q9NYV4 1490 aaPredicted RBP5.31□□□□□ -1.56
USP25-208ENST00000478932 MON2Q7Z3U7 1717 aa5.31□□□□□ -1.56
USP25-208ENST00000478932 IGHDP01880 384 aa5.31□□□□□ -1.56
USP25-208ENST00000478932 MBIPQ9NS73 344 aa5.31□□□□□ -1.56
USP25-208ENST00000478932 MIS18AQ9NYP9 233 aa5.31□□□□□ -1.56
USP25-208ENST00000478932 USP31Q70CQ4 1352 aa5.31□□□□□ -1.56
USP25-208ENST00000478932 IL16Q14005 1332 aa5.3□□□□□ -1.56
USP25-208ENST00000478932 KRT24Q2M2I5 525 aa5.3□□□□□ -1.56
USP25-208ENST00000478932 C8orf58Q8NAV2 365 aa5.3□□□□□ -1.56
USP25-208ENST00000478932 C19orf44Q9H6X5 657 aa5.3□□□□□ -1.56
USP25-208ENST00000478932 NOB1Q9ULX3 412 aaKnown RBP5.3□□□□□ -1.56
USP25-208ENST00000478932 XRN1Q8IZH2 1706 aaKnown RBP5.3□□□□□ -1.56
USP25-208ENST00000478932 AKAP12Q02952 1782 aa5.3□□□□□ -1.56
USP25-208ENST00000478932 TRIM27P14373 513 aa5.3□□□□□ -1.56
USP25-208ENST00000478932 HOXC9P31274 260 aa5.3□□□□□ -1.56
USP25-208ENST00000478932 FTSJ3Q8IY81 847 aaKnown RBP5.3□□□□□ -1.56
USP25-208ENST00000478932 USHBP1Q8N6Y0 703 aa5.3□□□□□ -1.56
USP25-208ENST00000478932 ITSN1Q15811 1721 aa5.3□□□□□ -1.56
USP25-208ENST00000478932 VAMP4O75379 141 aa5.29□□□□□ -1.56
USP25-208ENST00000478932 MTHFSDQ2M296 383 aaKnown RBP5.29□□□□□ -1.56
USP25-208ENST00000478932 ZKSCAN2Q63HK3 967 aa5.29□□□□□ -1.56
USP25-208ENST00000478932 CFAP44Q96MT7 982 aa5.29□□□□□ -1.56
USP25-208ENST00000478932 PCDHB15Q9Y5E8 787 aa5.29□□□□□ -1.56
USP25-208ENST00000478932 CHD2O14647 1828 aaKnown RBP5.29□□□□□ -1.56
USP25-208ENST00000478932 ANKARQ7Z5J8 1434 aa5.29□□□□□ -1.56
USP25-208ENST00000478932 FLT4P35916 1363 aa5.29□□□□□ -1.56
USP25-208ENST00000478932 KDM2BQ8NHM5 1336 aa5.29□□□□□ -1.56
USP25-208ENST00000478932 KDM4FA0A1W2PPD8 638 aa5.29□□□□□ -1.56
USP25-208ENST00000478932 GCP02774 474 aa5.29□□□□□ -1.56
USP25-208ENST00000478932 ZNF853P0CG23 659 aa5.29□□□□□ -1.56
USP25-208ENST00000478932 ATF3P18847 181 aa5.29□□□□□ -1.56
USP25-208ENST00000478932 RGS3P49796 1198 aa5.29□□□□□ -1.56
USP25-208ENST00000478932 GNAI1P63096 354 aa5.29□□□□□ -1.56
USP25-208ENST00000478932 ATF7IPQ6VMQ6 1270 aa5.29□□□□□ -1.56
USP25-208ENST00000478932 DZIP1LQ8IYY4 767 aaKnown RBP5.29□□□□□ -1.56
USP25-208ENST00000478932 ADGRL3Q9HAR2 1447 aa5.29□□□□□ -1.56
USP25-208ENST00000478932 SBNO1A3KN83 1393 aa5.29□□□□□ -1.56
USP25-208ENST00000478932 TOPAZ1Q8N9V7 1692 aa5.29□□□□□ -1.56
USP25-208ENST00000478932 CT47B1P0C2W7 299 aaPredicted RBP5.28□□□□□ -1.56
USP25-208ENST00000478932 CALD1Q05682 793 aaKnown RBP5.28□□□□□ -1.56
USP25-208ENST00000478932 TWISTNBQ3B726 338 aaPredicted RBP5.28□□□□□ -1.56
USP25-208ENST00000478932 CENPQQ7L2Z9 268 aaPredicted RBP5.28□□□□□ -1.56
USP25-208ENST00000478932 KRT28Q7Z3Y7 464 aa5.28□□□□□ -1.56
USP25-208ENST00000478932 IFT57Q9NWB7 429 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms