RNA–Protein interactions for RNA: ENST00000478736.1

PDE1C-208, Transcript of phosphodiesterase 1C, humanhuman

TSL 3

Gene PDE1C, Length 495 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-208ENST00000478736 ADH1CP00326 375 aa3.83□□□□□ -1.8
PDE1C-208ENST00000478736 AVPP01185 164 aa3.83□□□□□ -1.8
PDE1C-208ENST00000478736 TIMP2P16035 220 aa3.83□□□□□ -1.8
PDE1C-208ENST00000478736 PTK2Q05397 1052 aa3.83□□□□□ -1.8
PDE1C-208ENST00000478736 CBLBQ13191 982 aa3.83□□□□□ -1.8
PDE1C-208ENST00000478736 INTS6LQ5JSJ4 861 aaKnown RBP3.83□□□□□ -1.8
PDE1C-208ENST00000478736 VASH1Q7L8A9 365 aaPredicted RBP3.83□□□□□ -1.8
PDE1C-208ENST00000478736 TRIM46Q7Z4K8 759 aa3.83□□□□□ -1.8
PDE1C-208ENST00000478736 ADAMTS19Q8TE59 1207 aa3.83□□□□□ -1.8
PDE1C-208ENST00000478736 KCTD15Q96SI1 283 aaPredicted RBP3.83□□□□□ -1.8
PDE1C-208ENST00000478736 KRTAP4-8Q9BYQ9 185 aa3.83□□□□□ -1.8
PDE1C-208ENST00000478736 PCDHB9Q9Y5E1 797 aa3.83□□□□□ -1.8
PDE1C-208ENST00000478736 WASF2Q9Y6W5 498 aa3.83□□□□□ -1.8
PDE1C-208ENST00000478736 ERVH48-1M5A8F1 160 aa3.82□□□□□ -1.8
PDE1C-208ENST00000478736 PIK3CDO00329 1044 aa3.82□□□□□ -1.8
PDE1C-208ENST00000478736 WIPF1O43516 503 aa3.82□□□□□ -1.8
PDE1C-208ENST00000478736 ADD1P35611 737 aaKnown RBP3.82□□□□□ -1.8
PDE1C-208ENST00000478736 WDR4P57081 412 aaKnown RBP3.82□□□□□ -1.8
PDE1C-208ENST00000478736 NR1H3Q13133 447 aa3.82□□□□□ -1.8
PDE1C-208ENST00000478736 TRMT44Q8IYL2 757 aaKnown RBP3.82□□□□□ -1.8
PDE1C-208ENST00000478736 GPKOWQ92917 476 aaPredicted RBP eCLIP3.82□□□□□ -1.8
PDE1C-208ENST00000478736 CDCA7Q9BWT1 371 aaPredicted RBP3.82□□□□□ -1.8
PDE1C-208ENST00000478736 GMPR2Q9P2T1 348 aaKnown RBP3.82□□□□□ -1.8
PDE1C-208ENST00000478736 ZC3H4Q9UPT8 1303 aaKnown RBP3.81□□□□□ -1.8
PDE1C-208ENST00000478736 SOBPA7XYQ1 873 aa3.81□□□□□ -1.8
PDE1C-208ENST00000478736 AXIN1O15169 862 aa3.81□□□□□ -1.8
PDE1C-208ENST00000478736 ZIC2O95409 532 aaPredicted RBP3.81□□□□□ -1.8
PDE1C-208ENST00000478736 STAU1O95793 577 aaKnown RBP3.81□□□□□ -1.8
PDE1C-208ENST00000478736 SCTRP47872 440 aa3.81□□□□□ -1.8
PDE1C-208ENST00000478736 PPP1R26Q5T8A7 1209 aaPredicted RBP3.81□□□□□ -1.8
PDE1C-208ENST00000478736 DZIP3Q86Y13 1208 aaKnown RBP3.81□□□□□ -1.8
PDE1C-208ENST00000478736 FNBP4Q8N3X1 1017 aaPredicted RBP3.81□□□□□ -1.8
PDE1C-208ENST00000478736 MPNDQ8N594 471 aa3.81□□□□□ -1.8
PDE1C-208ENST00000478736 KDF1Q8NAX2 398 aaPredicted RBP3.81□□□□□ -1.8
PDE1C-208ENST00000478736 AGBL1Q96MI9 1066 aa3.81□□□□□ -1.8
PDE1C-208ENST00000478736 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.8□□□□□ -1.8
PDE1C-208ENST00000478736 ESPNB1AK53 854 aa3.8□□□□□ -1.8
PDE1C-208ENST00000478736 CAPN5O15484 640 aaPredicted RBP3.8□□□□□ -1.8
PDE1C-208ENST00000478736 LILRA1O75019 489 aa3.8□□□□□ -1.8
PDE1C-208ENST00000478736 SNRPBP14678 240 aaKnown RBP3.8□□□□□ -1.8
PDE1C-208ENST00000478736 UBTFP17480 764 aaKnown RBP3.8□□□□□ -1.8
PDE1C-208ENST00000478736 PHTF2Q8N3S3 785 aa3.8□□□□□ -1.8
PDE1C-208ENST00000478736 SLC10A4Q96EP9 437 aa3.8□□□□□ -1.8
PDE1C-208ENST00000478736 CCDC85AQ96PX6 553 aaPredicted RBP3.8□□□□□ -1.8
PDE1C-208ENST00000478736 GPSM3Q9Y4H4 160 aa3.8□□□□□ -1.8
PDE1C-208ENST00000478736 SOCS7O14512 581 aa3.79□□□□□ -1.8
PDE1C-208ENST00000478736 SMCPP49901 116 aaPredicted RBP3.79□□□□□ -1.8
PDE1C-208ENST00000478736 NR5A1Q13285 461 aa3.79□□□□□ -1.8
PDE1C-208ENST00000478736 ERICH6Q7L0X2 663 aa3.79□□□□□ -1.8
PDE1C-208ENST00000478736 CCDC116Q8IYX3 515 aa3.79□□□□□ -1.8
PDE1C-208ENST00000478736 ZNF784Q8NCA9 323 aaPredicted RBP3.79□□□□□ -1.8
PDE1C-208ENST00000478736 ATP13A2Q9NQ11 1180 aa3.79□□□□□ -1.8
PDE1C-208ENST00000478736 CYLDQ9NQC7 956 aa3.79□□□□□ -1.8
PDE1C-208ENST00000478736 CEP126Q9P2H0 1117 aa3.79□□□□□ -1.8
PDE1C-208ENST00000478736 ZNF777Q9ULD5 760 aaPredicted RBP3.79□□□□□ -1.8
PDE1C-208ENST00000478736 TIMELESSQ9UNS1 1208 aa3.79□□□□□ -1.8
PDE1C-208ENST00000478736 MAP4K5Q9Y4K4 846 aa3.79□□□□□ -1.8
PDE1C-208ENST00000478736 FLIIQ13045 1269 aa3.78□□□□□ -1.8
PDE1C-208ENST00000478736 C6orf118Q5T5N4 469 aa3.78□□□□□ -1.8
PDE1C-208ENST00000478736 CRIPAKQ8N1N5 446 aa3.78□□□□□ -1.8
PDE1C-208ENST00000478736 ZFP42Q96MM3 310 aa3.78□□□□□ -1.8
PDE1C-208ENST00000478736 PURBQ96QR8 312 aaKnown RBP3.78□□□□□ -1.8
PDE1C-208ENST00000478736 ALG2Q9H553 416 aa3.78□□□□□ -1.8
PDE1C-208ENST00000478736 ZNF395Q9H8N7 513 aaPredicted RBP3.78□□□□□ -1.8
PDE1C-208ENST00000478736 KRTAP9-6A0A140TA67 174 aa3.77□□□□□ -1.81
PDE1C-208ENST00000478736 XP32Q5T750 250 aa3.77□□□□□ -1.81
PDE1C-208ENST00000478736 HDGFL1Q5TGJ6 251 aa3.77□□□□□ -1.81
PDE1C-208ENST00000478736 UCN2Q96RP3 112 aa3.77□□□□□ -1.81
PDE1C-208ENST00000478736 KRTAP9-2Q9BYQ4 174 aa3.77□□□□□ -1.81
PDE1C-208ENST00000478736 ARID3CA6NKF2 412 aa3.76□□□□□ -1.81
PDE1C-208ENST00000478736 RELBQ01201 579 aa3.76□□□□□ -1.81
PDE1C-208ENST00000478736 NFX1Q12986 1120 aaKnown RBP3.76□□□□□ -1.81
PDE1C-208ENST00000478736 CTC1Q2NKJ3 1217 aa3.76□□□□□ -1.81
PDE1C-208ENST00000478736 LCE2CQ5TA81 110 aa3.76□□□□□ -1.81
PDE1C-208ENST00000478736 MRPL14Q6P1L8 145 aaKnown RBP3.76□□□□□ -1.81
PDE1C-208ENST00000478736 TBC1D9Q6ZT07 1266 aa3.76□□□□□ -1.81
PDE1C-208ENST00000478736 Q6ZVU0 165 aa3.76□□□□□ -1.81
PDE1C-208ENST00000478736 PROSER2Q86WR7 435 aaPredicted RBP3.76□□□□□ -1.81
PDE1C-208ENST00000478736 KRTAP1-3Q8IUG1 177 aa3.76□□□□□ -1.81
PDE1C-208ENST00000478736 DEPDC4Q8N2C3 294 aa3.76□□□□□ -1.81
PDE1C-208ENST00000478736 PNMA1Q8ND90 353 aa3.76□□□□□ -1.81
PDE1C-208ENST00000478736 ZNF330Q9Y3S2 320 aaPredicted RBP3.76□□□□□ -1.81
PDE1C-208ENST00000478736 PCDHB11Q9Y5F2 797 aa3.76□□□□□ -1.81
PDE1C-208ENST00000478736 FAM181BA6NEQ2 426 aa3.75□□□□□ -1.81
PDE1C-208ENST00000478736 FIGNL2A6NMB9 653 aa3.75□□□□□ -1.81
PDE1C-208ENST00000478736 RAD21O60216 631 aa3.75□□□□□ -1.81
PDE1C-208ENST00000478736 TRAK2O60296 914 aa3.75□□□□□ -1.81
PDE1C-208ENST00000478736 CTSOP43234 321 aaPredicted RBP3.75□□□□□ -1.81
PDE1C-208ENST00000478736 VEGFBP49765 207 aa3.75□□□□□ -1.81
PDE1C-208ENST00000478736 NBPF20Q3BBV1 942 aa3.75□□□□□ -1.81
PDE1C-208ENST00000478736 MEIOBQ8N635 442 aa3.75□□□□□ -1.81
PDE1C-208ENST00000478736 INSM2Q96T92 566 aaPredicted RBP3.75□□□□□ -1.81
PDE1C-208ENST00000478736 OSBPL3Q9H4L5 887 aa3.75□□□□□ -1.81
PDE1C-208ENST00000478736 RAB6BQ9NRW1 208 aa3.75□□□□□ -1.81
PDE1C-208ENST00000478736 EMILIN1Q9Y6C2 1016 aa3.75□□□□□ -1.81
PDE1C-208ENST00000478736 A6NJR5 290 aa3.74□□□□□ -1.81
PDE1C-208ENST00000478736 C11orf95C9JLR9 678 aaPredicted RBP3.74□□□□□ -1.81
PDE1C-208ENST00000478736 BMP2P12643 396 aa3.74□□□□□ -1.81
PDE1C-208ENST00000478736 EIF4G2P78344 907 aaKnown RBP eCLIP3.74□□□□□ -1.81
PDE1C-208ENST00000478736 SEMA3FQ13275 785 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms