RNA–Protein interactions for RNA: ENST00000478499.3

RN7SL259P-201, Transcript of RNA, 7SL, cytoplasmic 259, pseudogene, humanhuman

BASIC

Gene RN7SL259P, Length 253 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL259P-201ENST00000478499 AKT1S1Q96B36 256 aa10.62□□□□□ -0.71
RN7SL259P-201ENST00000478499 BRD4O60885 1362 aaPredicted RBP10.62□□□□□ -0.71
RN7SL259P-201ENST00000478499 PXDNLA1KZ92 1463 aa10.61□□□□□ -0.71
RN7SL259P-201ENST00000478499 PNPLA7Q6ZV29 1317 aa10.61□□□□□ -0.71
RN7SL259P-201ENST00000478499 CD2APQ9Y5K6 639 aa10.61□□□□□ -0.71
RN7SL259P-201ENST00000478499 CLTCL1P53675 1640 aa10.61□□□□□ -0.71
RN7SL259P-201ENST00000478499 CHRNA2Q15822 529 aa10.6□□□□□ -0.71
RN7SL259P-201ENST00000478499 LMO7Q8WWI1 1683 aa10.6□□□□□ -0.71
RN7SL259P-201ENST00000478499 ZNF326Q5BKZ1 582 aaKnown RBP10.59□□□□□ -0.71
RN7SL259P-201ENST00000478499 PLEKHH1Q9ULM0 1364 aa10.59□□□□□ -0.71
RN7SL259P-201ENST00000478499 CTCFP49711 727 aaPredicted RBP10.58□□□□□ -0.72
RN7SL259P-201ENST00000478499 MARCH10Q8NA82 808 aaPredicted RBP10.58□□□□□ -0.72
RN7SL259P-201ENST00000478499 ANKRD50Q9ULJ7 1429 aa10.58□□□□□ -0.72
RN7SL259P-201ENST00000478499 ITGAEP38570 1179 aa10.57□□□□□ -0.72
RN7SL259P-201ENST00000478499 WAPLQ7Z5K2 1190 aa10.57□□□□□ -0.72
RN7SL259P-201ENST00000478499 C16orf71Q8IYS4 520 aaPredicted RBP10.57□□□□□ -0.72
RN7SL259P-201ENST00000478499 SMC1BQ8NDV3 1235 aa10.57□□□□□ -0.72
RN7SL259P-201ENST00000478499 DDB1Q16531 1140 aa10.56□□□□□ -0.72
RN7SL259P-201ENST00000478499 CCER1Q8TC90 406 aaPredicted RBP10.56□□□□□ -0.72
RN7SL259P-201ENST00000478499 LRRC4BQ9NT99 713 aa10.56□□□□□ -0.72
RN7SL259P-201ENST00000478499 CCDC85CA6NKD9 419 aa10.55□□□□□ -0.72
RN7SL259P-201ENST00000478499 PRPF38BQ5VTL8 546 aaKnown RBP10.55□□□□□ -0.72
RN7SL259P-201ENST00000478499 ANKARQ7Z5J8 1434 aa10.55□□□□□ -0.72
RN7SL259P-201ENST00000478499 COL5A2P05997 1499 aaPredicted RBP10.55□□□□□ -0.72
RN7SL259P-201ENST00000478499 ABCC11Q96J66 1382 aa10.54□□□□□ -0.72
RN7SL259P-201ENST00000478499 EVA1CP58658 441 aa10.54□□□□□ -0.72
RN7SL259P-201ENST00000478499 CRB1P82279 1406 aa10.54□□□□□ -0.72
RN7SL259P-201ENST00000478499 NHSQ6T4R5 1651 aa10.53□□□□□ -0.72
RN7SL259P-201ENST00000478499 CPDO75976 1380 aa10.53□□□□□ -0.72
RN7SL259P-201ENST00000478499 KNDC1Q76NI1 1749 aa10.53□□□□□ -0.72
RN7SL259P-201ENST00000478499 IFT172Q9UG01 1749 aa10.53□□□□□ -0.72
RN7SL259P-201ENST00000478499 IGSF1Q8N6C5 1336 aa10.53□□□□□ -0.72
RN7SL259P-201ENST00000478499 ACIN1Q9UKV3 1341 aaKnown RBP10.53□□□□□ -0.72
RN7SL259P-201ENST00000478499 PLEKHG2Q9H7P9 1386 aa10.52□□□□□ -0.72
RN7SL259P-201ENST00000478499 RGPD8O14715 1765 aaPredicted RBP10.52□□□□□ -0.72
RN7SL259P-201ENST00000478499 VGFO15240 615 aaPredicted RBP10.52□□□□□ -0.73
RN7SL259P-201ENST00000478499 CUL9Q8IWT3 2517 aa10.51□□□□□ -0.73
RN7SL259P-201ENST00000478499 LBX1P52954 281 aa10.51□□□□□ -0.73
RN7SL259P-201ENST00000478499 TUBGCP6Q96RT7 1819 aa10.51□□□□□ -0.73
RN7SL259P-201ENST00000478499 GPRASP1Q5JY77 1395 aa10.51□□□□□ -0.73
RN7SL259P-201ENST00000478499 ANKRD30BQ9BXX2 1392 aa10.51□□□□□ -0.73
RN7SL259P-201ENST00000478499 ZC3H6P61129 1189 aaKnown RBP10.5□□□□□ -0.73
RN7SL259P-201ENST00000478499 NUP155O75694 1391 aa10.5□□□□□ -0.73
RN7SL259P-201ENST00000478499 KCPQ6ZWJ8 1503 aa10.49□□□□□ -0.73
RN7SL259P-201ENST00000478499 TRPM1Q7Z4N2 1603 aa10.49□□□□□ -0.73
RN7SL259P-201ENST00000478499 HSPA8P11142 646 aaKnown RBP10.49□□□□□ -0.73
RN7SL259P-201ENST00000478499 WBP1LQ9NX94 342 aa10.49□□□□□ -0.73
RN7SL259P-201ENST00000478499 TNRC6CQ9HCJ0 1690 aaKnown RBP10.48□□□□□ -0.73
RN7SL259P-201ENST00000478499 AKAP12Q02952 1782 aa10.48□□□□□ -0.73
RN7SL259P-201ENST00000478499 AIDAQ96BJ3 306 aa10.48□□□□□ -0.73
RN7SL259P-201ENST00000478499 WNK3Q9BYP7 1800 aa10.47□□□□□ -0.73
RN7SL259P-201ENST00000478499 SLC27A3Q5K4L6 730 aa10.47□□□□□ -0.73
RN7SL259P-201ENST00000478499 SIRT1Q96EB6 747 aa10.47□□□□□ -0.73
RN7SL259P-201ENST00000478499 KDM2BQ8NHM5 1336 aa10.47□□□□□ -0.73
RN7SL259P-201ENST00000478499 CNTNAP1P78357 1384 aa10.47□□□□□ -0.73
RN7SL259P-201ENST00000478499 CDCA7Q9BWT1 371 aaPredicted RBP10.46□□□□□ -0.73
RN7SL259P-201ENST00000478499 CREBZFQ9NS37 354 aa10.46□□□□□ -0.73
RN7SL259P-201ENST00000478499 TFCP2L1Q9NZI6 479 aa10.46□□□□□ -0.73
RN7SL259P-201ENST00000478499 RAB3GAP2Q9H2M9 1393 aa10.45□□□□□ -0.74
RN7SL259P-201ENST00000478499 MKRN1Q9UHC7 482 aaKnown RBP10.45□□□□□ -0.74
RN7SL259P-201ENST00000478499 RPGRIP1LQ68CZ1 1315 aa10.44□□□□□ -0.74
RN7SL259P-201ENST00000478499 DLL1O00548 723 aa10.44□□□□□ -0.74
RN7SL259P-201ENST00000478499 RRAGCQ9HB90 399 aa10.44□□□□□ -0.74
RN7SL259P-201ENST00000478499 STK26Q9P289 416 aa10.44□□□□□ -0.74
RN7SL259P-201ENST00000478499 QRICH2Q9H0J4 1663 aa10.44□□□□□ -0.74
RN7SL259P-201ENST00000478499 USP6P35125 1406 aa10.43□□□□□ -0.74
RN7SL259P-201ENST00000478499 MSL1Q68DK7 614 aa10.43□□□□□ -0.74
RN7SL259P-201ENST00000478499 COL23A1Q86Y22 540 aaPredicted RBP10.43□□□□□ -0.74
RN7SL259P-201ENST00000478499 A0A0C4DFX4 3053 aa10.42□□□□□ -0.74
RN7SL259P-201ENST00000478499 PKD1L3Q7Z443 1732 aa10.42□□□□□ -0.74
RN7SL259P-201ENST00000478499 PITPNM2Q9BZ72 1349 aa10.42□□□□□ -0.74
RN7SL259P-201ENST00000478499 CLSPNQ9HAW4 1339 aa10.42□□□□□ -0.74
RN7SL259P-201ENST00000478499 HIRIP3Q9BW71 556 aaPredicted RBP10.42□□□□□ -0.74
RN7SL259P-201ENST00000478499 BTAF1O14981 1849 aa10.42□□□□□ -0.74
RN7SL259P-201ENST00000478499 YTHDC2Q9H6S0 1430 aaKnown RBP10.41□□□□□ -0.74
RN7SL259P-201ENST00000478499 C9orf131Q5VYM1 1079 aa10.41□□□□□ -0.74
RN7SL259P-201ENST00000478499 ABCC6O95255 1503 aa10.41□□□□□ -0.74
RN7SL259P-201ENST00000478499 PRR36Q9H6K5 1346 aa10.4□□□□□ -0.74
RN7SL259P-201ENST00000478499 PIK3C2AO00443 1686 aa10.39□□□□□ -0.75
RN7SL259P-201ENST00000478499 PAK3O75914 559 aaPredicted RBP10.39□□□□□ -0.75
RN7SL259P-201ENST00000478499 TMEM132EQ6IEE7 984 aa10.39□□□□□ -0.75
RN7SL259P-201ENST00000478499 GCC1Q96CN9 775 aa10.39□□□□□ -0.75
RN7SL259P-201ENST00000478499 PPLO60437 1756 aa10.39□□□□□ -0.75
RN7SL259P-201ENST00000478499 ACSBG1Q96GR2 724 aa10.38□□□□□ -0.75
RN7SL259P-201ENST00000478499 KIAA1551Q9HCM1 1747 aa10.38□□□□□ -0.75
RN7SL259P-201ENST00000478499 VEGFBP49765 207 aa10.37□□□□□ -0.75
RN7SL259P-201ENST00000478499 HABP4Q5JVS0 413 aaKnown RBP10.37□□□□□ -0.75
RN7SL259P-201ENST00000478499 SPATA31E1Q6ZUB1 1445 aa10.37□□□□□ -0.75
RN7SL259P-201ENST00000478499 COL18A1P39060 1754 aa10.37□□□□□ -0.75
RN7SL259P-201ENST00000478499 WDR17Q8IZU2 1322 aa10.36□□□□□ -0.75
RN7SL259P-201ENST00000478499 VIRMAQ69YN4 1812 aaKnown RBP10.36□□□□□ -0.75
RN7SL259P-201ENST00000478499 EXOC5O00471 708 aa10.36□□□□□ -0.75
RN7SL259P-201ENST00000478499 KIF1BO60333 1816 aa10.35□□□□□ -0.75
RN7SL259P-201ENST00000478499 RGL3Q3MIN7 710 aa10.35□□□□□ -0.75
RN7SL259P-201ENST00000478499 ARHGAP27Q6ZUM4 889 aa10.35□□□□□ -0.75
RN7SL259P-201ENST00000478499 TOM1L2Q6ZVM7 507 aa10.35□□□□□ -0.75
RN7SL259P-201ENST00000478499 CFAP44Q96MT7 982 aa10.35□□□□□ -0.75
RN7SL259P-201ENST00000478499 MCOLN1Q9GZU1 580 aa10.35□□□□□ -0.75
RN7SL259P-201ENST00000478499 EIF3AQ14152 1382 aaKnown RBP10.35□□□□□ -0.75
RN7SL259P-201ENST00000478499 ADGRF5Q8IZF2 1346 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms