RNA–Protein interactions for RNA: ENST00000478462.5

MSL3-214, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-214ENST00000478462 CGNL1Q0VF96 1302 aa10.44□□□□□ -0.74
MSL3-214ENST00000478462 GABBR2O75899 941 aa10.44□□□□□ -0.74
MSL3-214ENST00000478462 KLHL34Q8N239 644 aa10.44□□□□□ -0.74
MSL3-214ENST00000478462 ZNF316A6NFI3 1004 aaPredicted RBP10.43□□□□□ -0.74
MSL3-214ENST00000478462 FYB1O15117 783 aa10.43□□□□□ -0.74
MSL3-214ENST00000478462 SOX12O15370 315 aa10.43□□□□□ -0.74
MSL3-214ENST00000478462 COG3Q96JB2 828 aa10.43□□□□□ -0.74
MSL3-214ENST00000478462 GGNBP2Q9H3C7 697 aa10.43□□□□□ -0.74
MSL3-214ENST00000478462 ZRANB1Q9UGI0 708 aa10.43□□□□□ -0.74
MSL3-214ENST00000478462 ABCA3Q99758 1704 aa10.43□□□□□ -0.74
MSL3-214ENST00000478462 MED1Q15648 1581 aaPredicted RBP10.43□□□□□ -0.74
MSL3-214ENST00000478462 GCP02774 474 aa10.42□□□□□ -0.74
MSL3-214ENST00000478462 LHX8Q68G74 356 aa10.42□□□□□ -0.74
MSL3-214ENST00000478462 KCNH5Q8NCM2 988 aa10.42□□□□□ -0.74
MSL3-214ENST00000478462 NGLY1Q96IV0 654 aa10.42□□□□□ -0.74
MSL3-214ENST00000478462 C8orf37Q96NL8 207 aa10.42□□□□□ -0.74
MSL3-214ENST00000478462 CRYBG1Q9Y4K1 1723 aa10.41□□□□□ -0.74
MSL3-214ENST00000478462 USP31Q70CQ4 1352 aa10.41□□□□□ -0.74
MSL3-214ENST00000478462 LRP6O75581 1613 aa10.41□□□□□ -0.74
MSL3-214ENST00000478462 PHRF1Q9P1Y6 1649 aaKnown RBP10.41□□□□□ -0.74
MSL3-214ENST00000478462 USP19O94966 1318 aa10.41□□□□□ -0.74
MSL3-214ENST00000478462 ZBTB7CA1YPR0 619 aa10.41□□□□□ -0.74
MSL3-214ENST00000478462 ZC3H6P61129 1189 aaKnown RBP10.41□□□□□ -0.74
MSL3-214ENST00000478462 DDX10Q13206 875 aaKnown RBP10.41□□□□□ -0.74
MSL3-214ENST00000478462 MAP2P11137 1827 aaKnown RBP10.4□□□□□ -0.74
MSL3-214ENST00000478462 PRDM11Q9NQV5 511 aa10.4□□□□□ -0.74
MSL3-214ENST00000478462 USP54Q70EL1 1684 aa10.39□□□□□ -0.75
MSL3-214ENST00000478462 FAM83GA6ND36 823 aa10.39□□□□□ -0.75
MSL3-214ENST00000478462 PER1O15534 1290 aaPredicted RBP10.39□□□□□ -0.75
MSL3-214ENST00000478462 CNGB1Q14028 1251 aaPredicted RBP10.39□□□□□ -0.75
MSL3-214ENST00000478462 LTN1O94822 1766 aa10.39□□□□□ -0.75
MSL3-214ENST00000478462 KIAA0232Q92628 1395 aa10.39□□□□□ -0.75
MSL3-214ENST00000478462 ANKRD26Q9UPS8 1709 aa10.38□□□□□ -0.75
MSL3-214ENST00000478462 CHRNA2Q15822 529 aa10.38□□□□□ -0.75
MSL3-214ENST00000478462 CC2D1BQ5T0F9 858 aaKnown RBP10.38□□□□□ -0.75
MSL3-214ENST00000478462 MORC1Q86VD1 984 aa10.38□□□□□ -0.75
MSL3-214ENST00000478462 OVOS2A0A0J9YW53 1432 aa10.38□□□□□ -0.75
MSL3-214ENST00000478462 OVOS2Q6IE36 1432 aa10.38□□□□□ -0.75
MSL3-214ENST00000478462 NSD2O96028 1365 aa10.38□□□□□ -0.75
MSL3-214ENST00000478462 SLIT3O75094 1523 aa10.38□□□□□ -0.75
MSL3-214ENST00000478462 RGPD5Q99666 1765 aa10.37□□□□□ -0.75
MSL3-214ENST00000478462 TNNT2P45379 298 aaPredicted RBP10.37□□□□□ -0.75
MSL3-214ENST00000478462 SPOCK2Q92563 424 aa10.37□□□□□ -0.75
MSL3-214ENST00000478462 ZBTB47Q9UFB7 747 aaPredicted RBP10.37□□□□□ -0.75
MSL3-214ENST00000478462 COL14A1Q05707 1796 aaKnown RBP10.37□□□□□ -0.75
MSL3-214ENST00000478462 AFF2P51816 1311 aa10.36□□□□□ -0.75
MSL3-214ENST00000478462 EVA1CP58658 441 aa10.36□□□□□ -0.75
MSL3-214ENST00000478462 ZNF772Q68DY9 489 aaPredicted RBP10.36□□□□□ -0.75
MSL3-214ENST00000478462 BTG4Q9NY30 223 aa10.36□□□□□ -0.75
MSL3-214ENST00000478462 USP21Q9UK80 565 aa10.36□□□□□ -0.75
MSL3-214ENST00000478462 CPDO75976 1380 aa10.36□□□□□ -0.75
MSL3-214ENST00000478462 NWD2Q9ULI1 1742 aa10.36□□□□□ -0.75
MSL3-214ENST00000478462 PLCH1Q4KWH8 1693 aa10.35□□□□□ -0.75
MSL3-214ENST00000478462 NFAT5O94916 1531 aa10.35□□□□□ -0.75
MSL3-214ENST00000478462 FBLN1P23142 703 aa10.35□□□□□ -0.75
MSL3-214ENST00000478462 AMPHP49418 695 aa10.35□□□□□ -0.75
MSL3-214ENST00000478462 CHADLQ6NUI6 762 aa10.35□□□□□ -0.75
MSL3-214ENST00000478462 ARHGEF25Q86VW2 580 aa10.35□□□□□ -0.75
MSL3-214ENST00000478462 FNBP4Q8N3X1 1017 aaPredicted RBP10.35□□□□□ -0.75
MSL3-214ENST00000478462 PPM1GO15355 546 aaPredicted RBP10.34□□□□□ -0.75
MSL3-214ENST00000478462 RRS1Q15050 365 aaKnown RBP10.34□□□□□ -0.75
MSL3-214ENST00000478462 UNC5CLQ8IV45 518 aa10.34□□□□□ -0.75
MSL3-214ENST00000478462 STRN4Q9NRL3 753 aa10.34□□□□□ -0.75
MSL3-214ENST00000478462 CREBZFQ9NS37 354 aa10.34□□□□□ -0.75
MSL3-214ENST00000478462 QTRT2Q9H974 415 aaKnown RBP10.33□□□□□ -0.76
MSL3-214ENST00000478462 CCDC9Q9Y3X0 531 aaKnown RBP10.33□□□□□ -0.76
MSL3-214ENST00000478462 AATKQ6ZMQ8 1374 aa10.33□□□□□ -0.76
MSL3-214ENST00000478462 NPC1L1Q9UHC9 1359 aa10.33□□□□□ -0.76
MSL3-214ENST00000478462 COL18A1P39060 1754 aa10.33□□□□□ -0.76
MSL3-214ENST00000478462 SLIT2O94813 1529 aa10.33□□□□□ -0.76
MSL3-214ENST00000478462 MAP3K19Q56UN5 1328 aa10.33□□□□□ -0.76
MSL3-214ENST00000478462 CSB-PGBD3P0DP91 1061 aa10.32□□□□□ -0.76
MSL3-214ENST00000478462 PLCB2Q00722 1185 aa10.32□□□□□ -0.76
MSL3-214ENST00000478462 IP6K1Q92551 441 aa10.32□□□□□ -0.76
MSL3-214ENST00000478462 TRPC5Q9UL62 973 aaPredicted RBP10.32□□□□□ -0.76
MSL3-214ENST00000478462 AXIN2Q9Y2T1 843 aa10.32□□□□□ -0.76
MSL3-214ENST00000478462 CAMTA1Q9Y6Y1 1673 aa10.31□□□□□ -0.76
MSL3-214ENST00000478462 BCL9LQ86UU0 1499 aa10.31□□□□□ -0.76
MSL3-214ENST00000478462 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.31□□□□□ -0.76
MSL3-214ENST00000478462 LTV1Q96GA3 475 aaPredicted RBP10.31□□□□□ -0.76
MSL3-214ENST00000478462 POLKQ9UBT6 870 aa10.31□□□□□ -0.76
MSL3-214ENST00000478462 RGS17Q9UGC6 210 aaPredicted RBP10.31□□□□□ -0.76
MSL3-214ENST00000478462 EMILIN1Q9Y6C2 1016 aa10.31□□□□□ -0.76
MSL3-214ENST00000478462 LMO7Q8WWI1 1683 aa10.31□□□□□ -0.76
MSL3-214ENST00000478462 NRAPQ86VF7 1730 aa10.3□□□□□ -0.76
MSL3-214ENST00000478462 HOXC9P31274 260 aa10.3□□□□□ -0.76
MSL3-214ENST00000478462 FLT4P35916 1363 aa10.29□□□□□ -0.76
MSL3-214ENST00000478462 KIF24Q5T7B8 1368 aa10.29□□□□□ -0.76
MSL3-214ENST00000478462 ABCC6O95255 1503 aa10.29□□□□□ -0.76
MSL3-214ENST00000478462 RXRBP28702 533 aa10.29□□□□□ -0.76
MSL3-214ENST00000478462 VPS72Q15906 364 aa10.29□□□□□ -0.76
MSL3-214ENST00000478462 HSP90AB2PQ58FF8 381 aa10.29□□□□□ -0.76
MSL3-214ENST00000478462 LARP1Q6PKG0 1096 aaKnown RBP10.29□□□□□ -0.76
MSL3-214ENST00000478462 POTEAQ6S8J7 498 aa10.29□□□□□ -0.76
MSL3-214ENST00000478462 TOM1L2Q6ZVM7 507 aa10.29□□□□□ -0.76
MSL3-214ENST00000478462 USP35Q9P2H5 1018 aa10.29□□□□□ -0.76
MSL3-214ENST00000478462 BLMP54132 1417 aaPredicted RBP10.29□□□□□ -0.76
MSL3-214ENST00000478462 COL5A2P05997 1499 aaPredicted RBP10.29□□□□□ -0.76
MSL3-214ENST00000478462 RTL1A6NKG5 1358 aa10.28□□□□□ -0.76
MSL3-214ENST00000478462 PEAK1Q9H792 1746 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms