RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 FSHRP23945 695 aa7.05□□□□□ -1.28
CALD1-218ENST00000478075 COL8A1P27658 744 aa7.05□□□□□ -1.28
CALD1-218ENST00000478075 GRIN2CQ14957 1233 aa7.05□□□□□ -1.28
CALD1-218ENST00000478075 BBXQ8WY36 941 aaPredicted RBP7.05□□□□□ -1.28
CALD1-218ENST00000478075 SYMPKQ92797 1274 aaKnown RBP7.05□□□□□ -1.28
CALD1-218ENST00000478075 HLA-CQ95604 372 aa7.05□□□□□ -1.28
CALD1-218ENST00000478075 TRERF1Q96PN7 1200 aa7.05□□□□□ -1.28
CALD1-218ENST00000478075 NOP53Q9NZM5 478 aaKnown RBP7.05□□□□□ -1.28
CALD1-218ENST00000478075 C6orf229H3BNL8 230 aa7.04□□□□□ -1.28
CALD1-218ENST00000478075 PAX4O43316 350 aa7.04□□□□□ -1.28
CALD1-218ENST00000478075 Q6ZVU0 165 aa7.04□□□□□ -1.28
CALD1-218ENST00000478075 SPRYD3Q8NCJ5 442 aa7.04□□□□□ -1.28
CALD1-218ENST00000478075 KRTAP4-9Q9BYQ8 210 aa7.03□□□□□ -1.28
CALD1-218ENST00000478075 SENP3-EIF4A1A0A087X0R7 540 aa7.02□□□□□ -1.29
CALD1-218ENST00000478075 SNRPNP63162 240 aaKnown RBP7.02□□□□□ -1.29
CALD1-218ENST00000478075 CD163Q86VB7 1156 aa7.02□□□□□ -1.29
CALD1-218ENST00000478075 RRAGCQ9HB90 399 aa7.02□□□□□ -1.29
CALD1-218ENST00000478075 SPDYE5A6NIY4 337 aa7.01□□□□□ -1.29
CALD1-218ENST00000478075 MAP2K3P46734 347 aa7.01□□□□□ -1.29
CALD1-218ENST00000478075 VASH1Q7L8A9 365 aaPredicted RBP7.01□□□□□ -1.29
CALD1-218ENST00000478075 TRIM22Q8IYM9 498 aa7.01□□□□□ -1.29
CALD1-218ENST00000478075 PHOX2BQ99453 314 aa7.01□□□□□ -1.29
CALD1-218ENST00000478075 KDM2AQ9Y2K7 1162 aa7.01□□□□□ -1.29
CALD1-218ENST00000478075 H7C1W4 665 aa7□□□□□ -1.29
CALD1-218ENST00000478075 GNB5O14775 395 aa7□□□□□ -1.29
CALD1-218ENST00000478075 MX2P20592 715 aa7□□□□□ -1.29
CALD1-218ENST00000478075 CTHP32929 405 aa7□□□□□ -1.29
CALD1-218ENST00000478075 GUCA2AQ02747 115 aa7□□□□□ -1.29
CALD1-218ENST00000478075 DOC2BQ14184 412 aa7□□□□□ -1.29
CALD1-218ENST00000478075 NUTM1Q86Y26 1132 aa7□□□□□ -1.29
CALD1-218ENST00000478075 FOXJ1Q92949 421 aa7□□□□□ -1.29
CALD1-218ENST00000478075 ARID1BQ8NFD5 2236 aaPredicted RBP6.99□□□□□ -1.29
CALD1-218ENST00000478075 OXCT2Q9BYC2 517 aaPredicted RBP6.99□□□□□ -1.29
CALD1-218ENST00000478075 POLMQ9NP87 494 aaPredicted RBP6.99□□□□□ -1.29
CALD1-218ENST00000478075 FDX1P10109 184 aa6.98□□□□□ -1.29
CALD1-218ENST00000478075 GATA4P43694 442 aa6.98□□□□□ -1.29
CALD1-218ENST00000478075 RNF217Q8TC41 542 aa6.98□□□□□ -1.29
CALD1-218ENST00000478075 ZNF837Q96EG3 531 aaPredicted RBP6.98□□□□□ -1.29
CALD1-218ENST00000478075 CTSOP43234 321 aaPredicted RBP6.97□□□□□ -1.29
CALD1-218ENST00000478075 LRP8Q14114 963 aa6.97□□□□□ -1.29
CALD1-218ENST00000478075 GDF2Q9UK05 429 aaPredicted RBP6.97□□□□□ -1.29
CALD1-218ENST00000478075 PRPF38BQ5VTL8 546 aaKnown RBP6.96□□□□□ -1.3
CALD1-218ENST00000478075 SMYD5Q6GMV2 418 aa6.96□□□□□ -1.3
CALD1-218ENST00000478075 TRMT44Q8IYL2 757 aaKnown RBP6.96□□□□□ -1.3
CALD1-218ENST00000478075 CHRNA4P43681 627 aa6.95□□□□□ -1.3
CALD1-218ENST00000478075 DHX9Q08211 1270 aaKnown RBP6.95□□□□□ -1.3
CALD1-218ENST00000478075 FOXD4L6Q3SYB3 417 aaPredicted RBP6.95□□□□□ -1.3
CALD1-218ENST00000478075 MCTP1Q6DN14 999 aa6.95□□□□□ -1.3
CALD1-218ENST00000478075 FOXD4L3Q6VB84 417 aaPredicted RBP6.95□□□□□ -1.3
CALD1-218ENST00000478075 ARMC2Q8NEN0 867 aa6.95□□□□□ -1.3
CALD1-218ENST00000478075 KRTAP4-2Q9BYR5 136 aa6.95□□□□□ -1.3
CALD1-218ENST00000478075 PPP1R26Q5T8A7 1209 aaPredicted RBP6.94□□□□□ -1.3
CALD1-218ENST00000478075 LYSMD3Q7Z3D4 306 aa6.94□□□□□ -1.3
CALD1-218ENST00000478075 PRR7Q8TB68 274 aa6.94□□□□□ -1.3
CALD1-218ENST00000478075 INSM2Q96T92 566 aaPredicted RBP6.94□□□□□ -1.3
CALD1-218ENST00000478075 C1QTNF2Q9BXJ5 285 aa6.94□□□□□ -1.3
CALD1-218ENST00000478075 CUEDC1Q9NWM3 386 aaPredicted RBP6.94□□□□□ -1.3
CALD1-218ENST00000478075 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.94□□□□□ -1.3
CALD1-218ENST00000478075 GPR25O00155 361 aa6.93□□□□□ -1.3
CALD1-218ENST00000478075 FZD5Q13467 585 aa6.93□□□□□ -1.3
CALD1-218ENST00000478075 CBLBQ13191 982 aa6.92□□□□□ -1.3
CALD1-218ENST00000478075 RSPO4Q2I0M5 234 aaPredicted RBP6.92□□□□□ -1.3
CALD1-218ENST00000478075 AMPD1P23109 780 aa6.91□□□□□ -1.3
CALD1-218ENST00000478075 C4orf48Q5BLP8 95 aa6.91□□□□□ -1.3
CALD1-218ENST00000478075 LYPD8Q6UX82 237 aa6.91□□□□□ -1.3
CALD1-218ENST00000478075 GOLGA6L1Q8N7Z2 621 aa6.91□□□□□ -1.3
CALD1-218ENST00000478075 RELBQ01201 579 aa6.9□□□□□ -1.3
CALD1-218ENST00000478075 LINC00114Q6XXX2 140 aa6.9□□□□□ -1.3
CALD1-218ENST00000478075 EDARADDQ8WWZ3 215 aa6.9□□□□□ -1.3
CALD1-218ENST00000478075 CDV3Q9UKY7 258 aaKnown RBP6.9□□□□□ -1.3
CALD1-218ENST00000478075 SHISA8B8ZZ34 492 aa6.89□□□□□ -1.31
CALD1-218ENST00000478075 MTMR2Q13614 643 aa6.89□□□□□ -1.31
CALD1-218ENST00000478075 LAMC2Q13753 1193 aa6.89□□□□□ -1.31
CALD1-218ENST00000478075 NKAPLQ5M9Q1 402 aa6.89□□□□□ -1.31
CALD1-218ENST00000478075 NBPF14Q5TI25 921 aa6.89□□□□□ -1.31
CALD1-218ENST00000478075 RIPOR1Q6ZS17 1223 aa6.89□□□□□ -1.31
CALD1-218ENST00000478075 GTPBP3Q969Y2 492 aaKnown RBP6.89□□□□□ -1.31
CALD1-218ENST00000478075 FMNL2Q96PY5 1086 aa6.89□□□□□ -1.31
CALD1-218ENST00000478075 SUV39H2Q9H5I1 410 aa6.89□□□□□ -1.31
CALD1-218ENST00000478075 PCDHGC3Q9UN70 934 aa6.89□□□□□ -1.31
CALD1-218ENST00000478075 KCNV2Q8TDN2 545 aa6.88□□□□□ -1.31
CALD1-218ENST00000478075 TRIM52Q96A61 297 aa6.88□□□□□ -1.31
CALD1-218ENST00000478075 GPR37O15354 613 aa6.87□□□□□ -1.31
CALD1-218ENST00000478075 DYRK3O43781 588 aa6.87□□□□□ -1.31
CALD1-218ENST00000478075 PHF24Q9UPV7 400 aa6.87□□□□□ -1.31
CALD1-218ENST00000478075 DBN1Q16643 649 aa6.86□□□□□ -1.31
CALD1-218ENST00000478075 P3H3Q8IVL6 736 aa6.86□□□□□ -1.31
CALD1-218ENST00000478075 COL17A1Q9UMD9 1497 aaPredicted RBP6.85□□□□□ -1.31
CALD1-218ENST00000478075 F12P00748 615 aaPredicted RBP6.85□□□□□ -1.31
CALD1-218ENST00000478075 AGBL1Q96MI9 1066 aa6.85□□□□□ -1.31
CALD1-218ENST00000478075 CFHR5Q9BXR6 569 aa6.85□□□□□ -1.31
CALD1-218ENST00000478075 DYRK1BQ9Y463 629 aa6.85□□□□□ -1.31
CALD1-218ENST00000478075 MDM2Q00987 491 aaPredicted RBP6.84□□□□□ -1.31
CALD1-218ENST00000478075 PRSS36Q5K4E3 855 aa6.84□□□□□ -1.31
CALD1-218ENST00000478075 HYAL3O43820 417 aaPredicted RBP6.83□□□□□ -1.32
CALD1-218ENST00000478075 SPATA31C1P0DKV0 1188 aa6.83□□□□□ -1.32
CALD1-218ENST00000478075 RBM26Q5T8P6 1007 aaKnown RBP6.83□□□□□ -1.32
CALD1-218ENST00000478075 FOXD4L5Q5VV16 416 aaPredicted RBP6.83□□□□□ -1.32
CALD1-218ENST00000478075 SEMA3EO15041 775 aa6.82□□□□□ -1.32
CALD1-218ENST00000478075 SLCO4C1Q6ZQN7 724 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms