RNA–Protein interactions for RNA: ENST00000476613.1

IRF1-209, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 523 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-209ENST00000476613 PDGFDQ9GZP0 370 aaPredicted RBP11.85□□□□□ -0.51
IRF1-209ENST00000476613 LRRC37A3O60309 1634 aa11.85□□□□□ -0.51
IRF1-209ENST00000476613 TOPAZ1Q8N9V7 1692 aa11.84□□□□□ -0.51
IRF1-209ENST00000476613 TXNRD1Q16881 649 aa11.84□□□□□ -0.51
IRF1-209ENST00000476613 ATF5Q9Y2D1 282 aaPredicted RBP11.84□□□□□ -0.51
IRF1-209ENST00000476613 ARHGEF28Q8N1W1 1705 aaKnown RBP11.83□□□□□ -0.52
IRF1-209ENST00000476613 GIGYF1O75420 1035 aaPredicted RBP11.82□□□□□ -0.52
IRF1-209ENST00000476613 MARCH10Q8NA82 808 aaPredicted RBP11.82□□□□□ -0.52
IRF1-209ENST00000476613 ARXQ96QS3 562 aa11.82□□□□□ -0.52
IRF1-209ENST00000476613 UTRNP46939 3433 aa11.82□□□□□ -0.52
IRF1-209ENST00000476613 TOM1L2Q6ZVM7 507 aa11.81□□□□□ -0.52
IRF1-209ENST00000476613 DCAF11Q8TEB1 546 aa11.81□□□□□ -0.52
IRF1-209ENST00000476613 WDR17Q8IZU2 1322 aa11.81□□□□□ -0.52
IRF1-209ENST00000476613 PTF1AQ7RTS3 328 aa11.8□□□□□ -0.52
IRF1-209ENST00000476613 SLIT3O75094 1523 aa11.8□□□□□ -0.52
IRF1-209ENST00000476613 KDM2AQ9Y2K7 1162 aa11.79□□□□□ -0.52
IRF1-209ENST00000476613 AKAP12Q02952 1782 aa11.79□□□□□ -0.52
IRF1-209ENST00000476613 WNK3Q9BYP7 1800 aa11.79□□□□□ -0.52
IRF1-209ENST00000476613 EXOC5O00471 708 aa11.78□□□□□ -0.52
IRF1-209ENST00000476613 GPR162Q16538 588 aa11.78□□□□□ -0.52
IRF1-209ENST00000476613 SLC16A10Q8TF71 515 aa11.78□□□□□ -0.52
IRF1-209ENST00000476613 CARD10Q9BWT7 1032 aa11.78□□□□□ -0.52
IRF1-209ENST00000476613 NLRP6P59044 892 aa11.77□□□□□ -0.53
IRF1-209ENST00000476613 COL18A1P39060 1754 aa11.77□□□□□ -0.53
IRF1-209ENST00000476613 PPIP5K1Q6PFW1 1433 aa11.77□□□□□ -0.53
IRF1-209ENST00000476613 KCNH5Q8NCM2 988 aa11.76□□□□□ -0.53
IRF1-209ENST00000476613 CCDC7Q96M83 1385 aa11.76□□□□□ -0.53
IRF1-209ENST00000476613 AXIN2Q9Y2T1 843 aa11.75□□□□□ -0.53
IRF1-209ENST00000476613 RAB3GAP2Q9H2M9 1393 aa11.75□□□□□ -0.53
IRF1-209ENST00000476613 USP6P35125 1406 aa11.75□□□□□ -0.53
IRF1-209ENST00000476613 CPSF1Q10570 1443 aaKnown RBP11.75□□□□□ -0.53
IRF1-209ENST00000476613 PAPPAQ13219 1627 aa11.75□□□□□ -0.53
IRF1-209ENST00000476613 SRPK2P78362 688 aaKnown RBP11.74□□□□□ -0.53
IRF1-209ENST00000476613 ARHGEF25Q86VW2 580 aa11.74□□□□□ -0.53
IRF1-209ENST00000476613 TNS2Q63HR2 1409 aa11.74□□□□□ -0.53
IRF1-209ENST00000476613 NHSQ6T4R5 1651 aa11.74□□□□□ -0.53
IRF1-209ENST00000476613 ZBTB7CA1YPR0 619 aa11.73□□□□□ -0.53
IRF1-209ENST00000476613 GRIN3BO60391 1043 aa11.73□□□□□ -0.53
IRF1-209ENST00000476613 ABCC6O95255 1503 aa11.73□□□□□ -0.53
IRF1-209ENST00000476613 POLD1P28340 1107 aa11.73□□□□□ -0.53
IRF1-209ENST00000476613 KIAA1210Q9ULL0 1709 aa11.73□□□□□ -0.53
IRF1-209ENST00000476613 COL24A1Q17RW2 1714 aa11.72□□□□□ -0.53
IRF1-209ENST00000476613 TRPM1Q7Z4N2 1603 aa11.72□□□□□ -0.53
IRF1-209ENST00000476613 SHANK3Q9BYB0 1731 aa11.72□□□□□ -0.53
IRF1-209ENST00000476613 CSB-PGBD3P0DP91 1061 aa11.71□□□□□ -0.53
IRF1-209ENST00000476613 SLC27A3Q5K4L6 730 aa11.71□□□□□ -0.53
IRF1-209ENST00000476613 ZNF692Q9BU19 519 aaPredicted RBP11.71□□□□□ -0.53
IRF1-209ENST00000476613 QSER1Q2KHR3 1735 aa11.71□□□□□ -0.54
IRF1-209ENST00000476613 AKT1S1Q96B36 256 aa11.7□□□□□ -0.54
IRF1-209ENST00000476613 CABP1Q9NZU7 370 aa11.7□□□□□ -0.54
IRF1-209ENST00000476613 PIK3C2AO00443 1686 aa11.69□□□□□ -0.54
IRF1-209ENST00000476613 CENPJQ9HC77 1338 aaPredicted RBP11.69□□□□□ -0.54
IRF1-209ENST00000476613 TRIM26Q12899 539 aaPredicted RBP11.69□□□□□ -0.54
IRF1-209ENST00000476613 ZNF827Q17R98 1081 aa11.69□□□□□ -0.54
IRF1-209ENST00000476613 CABP2Q9NPB3 220 aa11.69□□□□□ -0.54
IRF1-209ENST00000476613 TTC21AQ8NDW8 1320 aa11.68□□□□□ -0.54
IRF1-209ENST00000476613 LRRC4BQ9NT99 713 aa11.68□□□□□ -0.54
IRF1-209ENST00000476613 QRICH2Q9H0J4 1663 aa11.68□□□□□ -0.54
IRF1-209ENST00000476613 HSPA6P17066 643 aa11.67□□□□□ -0.54
IRF1-209ENST00000476613 ACSBG1Q96GR2 724 aa11.67□□□□□ -0.54
IRF1-209ENST00000476613 PNPLA7Q6ZV29 1317 aa11.66□□□□□ -0.54
IRF1-209ENST00000476613 TTC21BQ7Z4L5 1316 aa11.66□□□□□ -0.54
IRF1-209ENST00000476613 BTAF1O14981 1849 aa11.66□□□□□ -0.54
IRF1-209ENST00000476613 IL2RBP14784 551 aa11.66□□□□□ -0.54
IRF1-209ENST00000476613 PELP1Q8IZL8 1130 aaKnown RBP11.66□□□□□ -0.54
IRF1-209ENST00000476613 RGPD5Q99666 1765 aa11.66□□□□□ -0.54
IRF1-209ENST00000476613 KLHL34Q8N239 644 aa11.65□□□□□ -0.54
IRF1-209ENST00000476613 NFAT5O94916 1531 aa11.65□□□□□ -0.55
IRF1-209ENST00000476613 ERBB3P21860 1342 aa11.64□□□□□ -0.55
IRF1-209ENST00000476613 EVC2Q86UK5 1308 aa11.64□□□□□ -0.55
IRF1-209ENST00000476613 ATP10DQ9P241 1426 aa11.64□□□□□ -0.55
IRF1-209ENST00000476613 YBX3P16989 372 aaKnown RBP eCLIP11.64□□□□□ -0.55
IRF1-209ENST00000476613 HMGB2P26583 209 aaKnown RBP11.64□□□□□ -0.55
IRF1-209ENST00000476613 NBPF1Q3BBV0 1214 aa11.64□□□□□ -0.55
IRF1-209ENST00000476613 NLGN2Q8NFZ4 835 aa11.64□□□□□ -0.55
IRF1-209ENST00000476613 GPBP1L1Q9HC44 474 aaPredicted RBP11.64□□□□□ -0.55
IRF1-209ENST00000476613 TFCP2L1Q9NZI6 479 aa11.64□□□□□ -0.55
IRF1-209ENST00000476613 ADCY9O60503 1353 aa11.62□□□□□ -0.55
IRF1-209ENST00000476613 USP31Q70CQ4 1352 aa11.62□□□□□ -0.55
IRF1-209ENST00000476613 CEP350Q5VT06 3117 aa11.61□□□□□ -0.55
IRF1-209ENST00000476613 NLRP2Q9NX02 1062 aa11.61□□□□□ -0.55
IRF1-209ENST00000476613 CD2APQ9Y5K6 639 aa11.61□□□□□ -0.55
IRF1-209ENST00000476613 SOX12O15370 315 aa11.6□□□□□ -0.55
IRF1-209ENST00000476613 USP54Q70EL1 1684 aa11.59□□□□□ -0.55
IRF1-209ENST00000476613 ANKRD36BQ8N2N9 1353 aa11.59□□□□□ -0.55
IRF1-209ENST00000476613 KTN1Q86UP2 1357 aaKnown RBP11.58□□□□□ -0.56
IRF1-209ENST00000476613 ANKRD24Q8TF21 1146 aa11.58□□□□□ -0.56
IRF1-209ENST00000476613 TUBGCP6Q96RT7 1819 aa11.58□□□□□ -0.56
IRF1-209ENST00000476613 LY75O60449 1722 aa11.57□□□□□ -0.56
IRF1-209ENST00000476613 APLP1P51693 650 aa11.57□□□□□ -0.56
IRF1-209ENST00000476613 FLAD1Q8NFF5 587 aa11.57□□□□□ -0.56
IRF1-209ENST00000476613 GOLGB1Q14789 3259 aaKnown RBP11.57□□□□□ -0.56
IRF1-209ENST00000476613 COL23A1Q86Y22 540 aaPredicted RBP11.56□□□□□ -0.56
IRF1-209ENST00000476613 CCNL1Q9UK58 526 aaPredicted RBP11.56□□□□□ -0.56
IRF1-209ENST00000476613 PRIM1P49642 420 aaKnown RBP11.55□□□□□ -0.56
IRF1-209ENST00000476613 DDX54Q8TDD1 881 aaKnown RBP11.55□□□□□ -0.56
IRF1-209ENST00000476613 MON2Q7Z3U7 1717 aa11.55□□□□□ -0.56
IRF1-209ENST00000476613 NSD2O96028 1365 aa11.54□□□□□ -0.56
IRF1-209ENST00000476613 KIF3CO14782 793 aa11.54□□□□□ -0.56
IRF1-209ENST00000476613 MSH5O43196 834 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms