RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 MS4A1P11836 297 aa6.8□□□□□ -1.32
VPS13D-206ENST00000476045 C9orf84Q5VXU9 1444 aa6.8□□□□□ -1.32
VPS13D-206ENST00000476045 PCDHGC3Q9UN70 934 aa6.8□□□□□ -1.32
VPS13D-206ENST00000476045 FCF1Q9Y324 198 aaKnown RBP6.8□□□□□ -1.32
VPS13D-206ENST00000476045 PREX1Q8TCU6 1659 aa6.8□□□□□ -1.32
VPS13D-206ENST00000476045 ARID3CA6NKF2 412 aa6.79□□□□□ -1.32
VPS13D-206ENST00000476045 GDF9O60383 454 aa6.79□□□□□ -1.32
VPS13D-206ENST00000476045 UBTFP17480 764 aaKnown RBP6.79□□□□□ -1.32
VPS13D-206ENST00000476045 DIP2CQ9Y2E4 1556 aa6.78□□□□□ -1.32
VPS13D-206ENST00000476045 EHBP1L1Q8N3D4 1523 aa6.78□□□□□ -1.32
VPS13D-206ENST00000476045 ARHGEF12Q9NZN5 1544 aa6.78□□□□□ -1.32
VPS13D-206ENST00000476045 GFRA3O60609 400 aa6.78□□□□□ -1.32
VPS13D-206ENST00000476045 GUCA2AQ02747 115 aa6.78□□□□□ -1.32
VPS13D-206ENST00000476045 PDE4DQ08499 809 aa6.78□□□□□ -1.32
VPS13D-206ENST00000476045 RETREG3Q86VR2 466 aa6.78□□□□□ -1.32
VPS13D-206ENST00000476045 NUTM1Q86Y26 1132 aa6.78□□□□□ -1.32
VPS13D-206ENST00000476045 ABCA6Q8N139 1617 aa6.78□□□□□ -1.32
VPS13D-206ENST00000476045 SIGLEC1Q9BZZ2 1709 aa6.78□□□□□ -1.32
VPS13D-206ENST00000476045 MROH2AA6NES4 1674 aa6.77□□□□□ -1.32
VPS13D-206ENST00000476045 FDX1P10109 184 aa6.77□□□□□ -1.33
VPS13D-206ENST00000476045 DIXDC1Q155Q3 683 aa6.77□□□□□ -1.33
VPS13D-206ENST00000476045 ZNF697Q5TEC3 545 aa6.77□□□□□ -1.33
VPS13D-206ENST00000476045 BEGAINQ9BUH8 593 aa6.77□□□□□ -1.33
VPS13D-206ENST00000476045 SLC24A3Q9HC58 644 aa6.77□□□□□ -1.33
VPS13D-206ENST00000476045 PLEKHH2Q8IVE3 1493 aa6.77□□□□□ -1.33
VPS13D-206ENST00000476045 SETD1BQ9UPS6 1966 aaKnown RBP6.77□□□□□ -1.33
VPS13D-206ENST00000476045 SCAPERQ9BY12 1400 aa6.76□□□□□ -1.33
VPS13D-206ENST00000476045 AGLP35573 1532 aa6.76□□□□□ -1.33
VPS13D-206ENST00000476045 MOXD2PA6NHM9 499 aa6.76□□□□□ -1.33
VPS13D-206ENST00000476045 JUNDP17535 347 aa6.76□□□□□ -1.33
VPS13D-206ENST00000476045 TUSC1Q2TAM9 212 aa6.76□□□□□ -1.33
VPS13D-206ENST00000476045 PKD2L1Q9P0L9 805 aa6.76□□□□□ -1.33
VPS13D-206ENST00000476045 PDZRN3Q9UPQ7 1066 aa6.76□□□□□ -1.33
VPS13D-206ENST00000476045 ATP10AO60312 1499 aa6.76□□□□□ -1.33
VPS13D-206ENST00000476045 MLH3Q9UHC1 1453 aa6.76□□□□□ -1.33
VPS13D-206ENST00000476045 INO80Q9ULG1 1556 aaPredicted RBP6.76□□□□□ -1.33
VPS13D-206ENST00000476045 KIDINS220Q9ULH0 1771 aa6.75□□□□□ -1.33
VPS13D-206ENST00000476045 ADGBQ8N7X0 1667 aa6.75□□□□□ -1.33
VPS13D-206ENST00000476045 LMTK3Q96Q04 1460 aa6.75□□□□□ -1.33
VPS13D-206ENST00000476045 SPTLC1O15269 473 aa6.75□□□□□ -1.33
VPS13D-206ENST00000476045 RAPGEF3O95398 923 aa6.75□□□□□ -1.33
VPS13D-206ENST00000476045 RANGAP1P46060 587 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-206ENST00000476045 DESI1Q6ICB0 168 aa6.75□□□□□ -1.33
VPS13D-206ENST00000476045 RSBN1LQ6PCB5 846 aaPredicted RBP6.75□□□□□ -1.33
VPS13D-206ENST00000476045 TBC1D2Q9BYX2 928 aa6.75□□□□□ -1.33
VPS13D-206ENST00000476045 FAM135AQ9P2D6 1515 aa6.75□□□□□ -1.33
VPS13D-206ENST00000476045 YEATS2Q9ULM3 1422 aa6.75□□□□□ -1.33
VPS13D-206ENST00000476045 SAMD9LQ8IVG5 1584 aa6.74□□□□□ -1.33
VPS13D-206ENST00000476045 SUPT6HQ7KZ85 1726 aaKnown RBP6.74□□□□□ -1.33
VPS13D-206ENST00000476045 EFCAB2Q5VUJ9 269 aa6.74□□□□□ -1.33
VPS13D-206ENST00000476045 Q6ZNB5 142 aa6.74□□□□□ -1.33
VPS13D-206ENST00000476045 SYCP2Q9BX26 1530 aa6.74□□□□□ -1.33
VPS13D-206ENST00000476045 PLXNC1O60486 1568 aa6.74□□□□□ -1.33
VPS13D-206ENST00000476045 ATP7AQ04656 1500 aa6.73□□□□□ -1.33
VPS13D-206ENST00000476045 SPDYE5A6NIY4 337 aa6.73□□□□□ -1.33
VPS13D-206ENST00000476045 TIAM1Q13009 1591 aa6.73□□□□□ -1.33
VPS13D-206ENST00000476045 C3P01024 1663 aa6.72□□□□□ -1.33
VPS13D-206ENST00000476045 ZNF142P52746 1687 aaPredicted RBP6.72□□□□□ -1.33
VPS13D-206ENST00000476045 NDUFV2P19404 249 aa6.72□□□□□ -1.33
VPS13D-206ENST00000476045 TRIM32Q13049 653 aa6.72□□□□□ -1.33
VPS13D-206ENST00000476045 PRPF38BQ5VTL8 546 aaKnown RBP6.72□□□□□ -1.33
VPS13D-206ENST00000476045 SYMPKQ92797 1274 aaKnown RBP6.72□□□□□ -1.33
VPS13D-206ENST00000476045 CNTLNQ9NXG0 1405 aa6.72□□□□□ -1.33
VPS13D-206ENST00000476045 ARID4BQ4LE39 1312 aaPredicted RBP6.72□□□□□ -1.33
VPS13D-206ENST00000476045 CEP162Q5TB80 1403 aa6.71□□□□□ -1.34
VPS13D-206ENST00000476045 KIAA1107Q9UPP5 1409 aa6.71□□□□□ -1.34
VPS13D-206ENST00000476045 DGAT1O75907 488 aa6.71□□□□□ -1.34
VPS13D-206ENST00000476045 PTPRNQ16849 979 aa6.71□□□□□ -1.34
VPS13D-206ENST00000476045 MYSM1Q5VVJ2 828 aa6.71□□□□□ -1.34
VPS13D-206ENST00000476045 TOR4AQ9NXH8 423 aa6.71□□□□□ -1.34
VPS13D-206ENST00000476045 WNT7AO00755 349 aa6.7□□□□□ -1.34
VPS13D-206ENST00000476045 CD2BP2O95400 341 aaKnown RBP6.7□□□□□ -1.34
VPS13D-206ENST00000476045 MTMR2Q13614 643 aa6.7□□□□□ -1.34
VPS13D-206ENST00000476045 TRAF7Q6Q0C0 670 aa6.7□□□□□ -1.34
VPS13D-206ENST00000476045 MTUS2Q5JR59 1369 aa6.69□□□□□ -1.34
VPS13D-206ENST00000476045 WNT7BP56706 349 aa6.69□□□□□ -1.34
VPS13D-206ENST00000476045 CRIPAKQ8N1N5 446 aa6.69□□□□□ -1.34
VPS13D-206ENST00000476045 NUDT12Q9BQG2 462 aa6.69□□□□□ -1.34
VPS13D-206ENST00000476045 GPATCH8Q9UKJ3 1502 aaKnown RBP6.69□□□□□ -1.34
VPS13D-206ENST00000476045 ARHGEF5Q12774 1597 aa6.69□□□□□ -1.34
VPS13D-206ENST00000476045 MYO3AQ8NEV4 1616 aa6.68□□□□□ -1.34
VPS13D-206ENST00000476045 UHRF1BP1Q6BDS2 1440 aa6.68□□□□□ -1.34
VPS13D-206ENST00000476045 ZC3H13Q5T200 1668 aaKnown RBP6.68□□□□□ -1.34
VPS13D-206ENST00000476045 MAP3K1Q13233 1512 aa6.68□□□□□ -1.34
VPS13D-206ENST00000476045 C6orf229H3BNL8 230 aa6.68□□□□□ -1.34
VPS13D-206ENST00000476045 AVPP01185 164 aa6.68□□□□□ -1.34
VPS13D-206ENST00000476045 CCNYL3P0C7X3 344 aa6.68□□□□□ -1.34
VPS13D-206ENST00000476045 PRKCSHP14314 528 aaPredicted RBP6.68□□□□□ -1.34
VPS13D-206ENST00000476045 PRR7Q8TB68 274 aa6.68□□□□□ -1.34
VPS13D-206ENST00000476045 ATP1B4Q9UN42 357 aaPredicted RBP6.68□□□□□ -1.34
VPS13D-206ENST00000476045 CCNB3Q8WWL7 1395 aa6.68□□□□□ -1.34
VPS13D-206ENST00000476045 NPATQ14207 1427 aa6.67□□□□□ -1.34
VPS13D-206ENST00000476045 TRAPPC8Q9Y2L5 1435 aa6.67□□□□□ -1.34
VPS13D-206ENST00000476045 CCDC141Q6ZP82 1450 aa6.67□□□□□ -1.34
VPS13D-206ENST00000476045 TNFRSF10AO00220 468 aa6.67□□□□□ -1.34
VPS13D-206ENST00000476045 ZBTB24O43167 697 aaPredicted RBP6.67□□□□□ -1.34
VPS13D-206ENST00000476045 HRCP23327 699 aa6.67□□□□□ -1.34
VPS13D-206ENST00000476045 SKOR1P84550 965 aa6.67□□□□□ -1.34
VPS13D-206ENST00000476045 RIC3Q7Z5B4 369 aa6.67□□□□□ -1.34
VPS13D-206ENST00000476045 ZBTB3Q9H5J0 574 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms