RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 STAC3Q96MF2 364 aa15.32■□□□□ 0.04
CALD1-217ENST00000475772 SPATA31A5Q5VU36 1347 aa15.32■□□□□ 0.04
CALD1-217ENST00000475772 SPATA31A7Q8IWB4 1347 aa15.32■□□□□ 0.04
CALD1-217ENST00000475772 ARHGEF28Q8N1W1 1705 aaKnown RBP15.31■□□□□ 0.04
CALD1-217ENST00000475772 HRCP23327 699 aa15.31■□□□□ 0.04
CALD1-217ENST00000475772 SF3B2Q13435 895 aaKnown RBP15.31■□□□□ 0.04
CALD1-217ENST00000475772 NGDNQ8NEJ9 315 aaKnown RBP15.31■□□□□ 0.04
CALD1-217ENST00000475772 NUDT16Q96DE0 195 aaKnown RBP15.31■□□□□ 0.04
CALD1-217ENST00000475772 ATP7BP35670 1465 aa15.29■□□□□ 0.04
CALD1-217ENST00000475772 EIF3AQ14152 1382 aaKnown RBP15.29■□□□□ 0.04
CALD1-217ENST00000475772 CDK19Q9BWU1 502 aa15.29■□□□□ 0.04
CALD1-217ENST00000475772 A0A0G2JS52 829 aa15.28■□□□□ 0.04
CALD1-217ENST00000475772 TIE1P35590 1138 aa15.28■□□□□ 0.04
CALD1-217ENST00000475772 MYT1Q01538 1121 aa15.28■□□□□ 0.04
CALD1-217ENST00000475772 EN1Q05925 392 aaPredicted RBP15.28■□□□□ 0.04
CALD1-217ENST00000475772 THSD7AQ9UPZ6 1657 aa15.28■□□□□ 0.04
CALD1-217ENST00000475772 PSDA5PKW4 1024 aaPredicted RBP15.27■□□□□ 0.04
CALD1-217ENST00000475772 BAG6P46379 1132 aa15.27■□□□□ 0.04
CALD1-217ENST00000475772 CHRNA2Q15822 529 aa15.27■□□□□ 0.04
CALD1-217ENST00000475772 SPATA31A1Q5TZJ5 1347 aa15.26■□□□□ 0.03
CALD1-217ENST00000475772 POTEIP0CG38 1075 aa15.26■□□□□ 0.03
CALD1-217ENST00000475772 NUTM2GQ5VZR2 741 aa15.26■□□□□ 0.03
CALD1-217ENST00000475772 PRDM11Q9NQV5 511 aa15.26■□□□□ 0.03
CALD1-217ENST00000475772 ITSN1Q15811 1721 aa15.26■□□□□ 0.03
CALD1-217ENST00000475772 KIAA0232Q92628 1395 aa15.25■□□□□ 0.03
CALD1-217ENST00000475772 PLEKHG3A1L390 1219 aa15.25■□□□□ 0.03
CALD1-217ENST00000475772 ZC3H6P61129 1189 aaKnown RBP15.25■□□□□ 0.03
CALD1-217ENST00000475772 PDAP1Q13442 181 aaKnown RBP15.25■□□□□ 0.03
CALD1-217ENST00000475772 NBPF1Q3BBV0 1214 aa15.25■□□□□ 0.03
CALD1-217ENST00000475772 NBPF8Q3BBV2 869 aa15.25■□□□□ 0.03
CALD1-217ENST00000475772 BMP2KQ9NSY1 1161 aaPredicted RBP15.25■□□□□ 0.03
CALD1-217ENST00000475772 PHRF1Q9P1Y6 1649 aaKnown RBP15.25■□□□□ 0.03
CALD1-217ENST00000475772 POLR3AO14802 1390 aaPredicted RBP15.24■□□□□ 0.03
CALD1-217ENST00000475772 ACEP12821 1306 aa15.24■□□□□ 0.03
CALD1-217ENST00000475772 PSEN1P49768 467 aa15.24■□□□□ 0.03
CALD1-217ENST00000475772 DCBLD2Q96PD2 775 aa15.24■□□□□ 0.03
CALD1-217ENST00000475772 LRP5O75197 1615 aa15.24■□□□□ 0.03
CALD1-217ENST00000475772 RGPD1P0DJD0 1748 aa15.23■□□□□ 0.03
CALD1-217ENST00000475772 ASTLQ6HA08 431 aaPredicted RBP15.23■□□□□ 0.03
CALD1-217ENST00000475772 TNS1Q9HBL0 1735 aaKnown RBP15.23■□□□□ 0.03
CALD1-217ENST00000475772 TOPAZ1Q8N9V7 1692 aa15.22■□□□□ 0.03
CALD1-217ENST00000475772 TTLL13PA6NNM8 815 aa15.22■□□□□ 0.03
CALD1-217ENST00000475772 ATMINO43313 823 aaPredicted RBP15.22■□□□□ 0.03
CALD1-217ENST00000475772 EZH2Q15910 746 aaKnown RBP15.22■□□□□ 0.03
CALD1-217ENST00000475772 STRN4Q9NRL3 753 aa15.22■□□□□ 0.03
CALD1-217ENST00000475772 KIAA1210Q9ULL0 1709 aa15.21■□□□□ 0.03
CALD1-217ENST00000475772 DISP2A7MBM2 1401 aa15.21■□□□□ 0.03
CALD1-217ENST00000475772 CAMKK2Q96RR4 588 aa15.21■□□□□ 0.03
CALD1-217ENST00000475772 CAMTA1Q9Y6Y1 1673 aa15.2■□□□□ 0.02
CALD1-217ENST00000475772 TRIM37O94972 964 aa15.2■□□□□ 0.02
CALD1-217ENST00000475772 TMEM106CQ9BVX2 250 aa15.19■□□□□ 0.02
CALD1-217ENST00000475772 TAOK2Q9UL54 1235 aa15.19■□□□□ 0.02
CALD1-217ENST00000475772 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.18■□□□□ 0.02
CALD1-217ENST00000475772 ATN1P54259 1190 aaPredicted RBP15.18■□□□□ 0.02
CALD1-217ENST00000475772 R3HDM1Q15032 1099 aaKnown RBP15.18■□□□□ 0.02
CALD1-217ENST00000475772 LARP1Q6PKG0 1096 aaKnown RBP15.18■□□□□ 0.02
CALD1-217ENST00000475772 FAM196AQ6ZSG2 479 aa15.18■□□□□ 0.02
CALD1-217ENST00000475772 BARGINQ6ZT62 677 aa15.18■□□□□ 0.02
CALD1-217ENST00000475772 ABTB2Q8N961 1025 aa15.18■□□□□ 0.02
CALD1-217ENST00000475772 ZFP91Q96JP5 570 aaPredicted RBP15.18■□□□□ 0.02
CALD1-217ENST00000475772 USP35Q9P2H5 1018 aa15.18■□□□□ 0.02
CALD1-217ENST00000475772 LMO7Q8WWI1 1683 aa15.17■□□□□ 0.02
CALD1-217ENST00000475772 NRKQ7Z2Y5 1582 aa15.17■□□□□ 0.02
CALD1-217ENST00000475772 CABP2Q9NPB3 220 aa15.17■□□□□ 0.02
CALD1-217ENST00000475772 SSH2Q76I76 1423 aa15.17■□□□□ 0.02
CALD1-217ENST00000475772 USP19O94966 1318 aa15.17■□□□□ 0.02
CALD1-217ENST00000475772 CPDO75976 1380 aa15.16■□□□□ 0.02
CALD1-217ENST00000475772 EVA1CP58658 441 aa15.16■□□□□ 0.02
CALD1-217ENST00000475772 GCP02774 474 aa15.15■□□□□ 0.02
CALD1-217ENST00000475772 APBA3O96018 575 aa15.14■□□□□ 0.01
CALD1-217ENST00000475772 NLRP13Q86W25 1043 aa15.14■□□□□ 0.01
CALD1-217ENST00000475772 TCP11L2Q8N4U5 519 aa15.14■□□□□ 0.01
CALD1-217ENST00000475772 SRPK2P78362 688 aaKnown RBP15.13■□□□□ 0.01
CALD1-217ENST00000475772 PPIP5K1Q6PFW1 1433 aa15.13■□□□□ 0.01
CALD1-217ENST00000475772 PELP1Q8IZL8 1130 aaKnown RBP15.13■□□□□ 0.01
CALD1-217ENST00000475772 CENPJQ9HC77 1338 aaPredicted RBP15.13■□□□□ 0.01
CALD1-217ENST00000475772 PDE3BQ13370 1112 aa15.12■□□□□ 0.01
CALD1-217ENST00000475772 CABP1Q9NZU7 370 aa15.12■□□□□ 0.01
CALD1-217ENST00000475772 TRIM35Q9UPQ4 493 aa15.11■□□□□ 0.01
CALD1-217ENST00000475772 THRAP3Q9Y2W1 955 aaKnown RBP15.11■□□□□ 0.01
CALD1-217ENST00000475772 RREB1Q92766 1687 aa15.11■□□□□ 0.01
CALD1-217ENST00000475772 COL5A2P05997 1499 aaPredicted RBP15.1■□□□□ 0.01
CALD1-217ENST00000475772 COL18A1P39060 1754 aa15.1■□□□□ 0.01
CALD1-217ENST00000475772 NUP188Q5SRE5 1749 aa15.09■□□□□ 0.01
CALD1-217ENST00000475772 PARP4Q9UKK3 1724 aaKnown RBP15.09■□□□□ 0.01
CALD1-217ENST00000475772 L3MBTL2Q969R5 705 aa15.09■□□□□ 0.01
CALD1-217ENST00000475772 QRICH2Q9H0J4 1663 aa15.09■□□□□ 0.01
CALD1-217ENST00000475772 USP6P35125 1406 aa15.09■□□□□ 0.01
CALD1-217ENST00000475772 SBF2Q86WG5 1849 aa15.08■□□□□ 0.01
CALD1-217ENST00000475772 NLRP6P59044 892 aa15.08■□□□□ 0
CALD1-217ENST00000475772 AXIN2Q9Y2T1 843 aa15.08■□□□□ 0
CALD1-217ENST00000475772 BRD4O60885 1362 aaPredicted RBP15.08■□□□□ 0
CALD1-217ENST00000475772 PARD3Q8TEW0 1356 aa15.08■□□□□ 0
CALD1-217ENST00000475772 PEAK1Q9H792 1746 aa15.07■□□□□ 0
CALD1-217ENST00000475772 STK25O00506 426 aa15.07■□□□□ 0
CALD1-217ENST00000475772 SIN3AQ96ST3 1273 aa15.07■□□□□ 0
CALD1-217ENST00000475772 BCL11BQ9C0K0 894 aaPredicted RBP15.07■□□□□ 0
CALD1-217ENST00000475772 SLIT3O75094 1523 aa15.07■□□□□ 0
CALD1-217ENST00000475772 RGPD5Q99666 1765 aa15.06■□□□□ 0
CALD1-217ENST00000475772 PTF1AQ7RTS3 328 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 728.9 ms