RNA–Protein interactions for RNA: ENST00000475732.1

DMD-223, Transcript of dystrophin, human

TSL 5

Gene DMD, Length 669 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DMD-223	ENST00000475732	NGLY1	Q96IV0	654 aa		13.71	□□□□□ -0.21
DMD-223	ENST00000475732	CPD	O75976	1380 aa		13.71	□□□□□ -0.22
DMD-223	ENST00000475732	KIAA0232	Q92628	1395 aa		13.71	□□□□□ -0.22
DMD-223	ENST00000475732	PLCH1	Q4KWH8	1693 aa		13.7	□□□□□ -0.22
DMD-223	ENST00000475732	PRDM11	Q9NQV5	511 aa		13.7	□□□□□ -0.22
DMD-223	ENST00000475732	LTN1	O94822	1766 aa		13.7	□□□□□ -0.22
DMD-223	ENST00000475732	NFAT5	O94916	1531 aa		13.69	□□□□□ -0.22
DMD-223	ENST00000475732	FAM83G	A6ND36	823 aa		13.69	□□□□□ -0.22
DMD-223	ENST00000475732	DDX10	Q13206	875 aa	Known RBP	13.69	□□□□□ -0.22
DMD-223	ENST00000475732	NWD2	Q9ULI1	1742 aa		13.69	□□□□□ -0.22
DMD-223	ENST00000475732	ZBTB7C	A1YPR0	619 aa		13.68	□□□□□ -0.22
DMD-223	ENST00000475732	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.68	□□□□□ -0.22
DMD-223	ENST00000475732	AFF2	P51816	1311 aa		13.67	□□□□□ -0.22
DMD-223	ENST00000475732	MAP2	P11137	1827 aa	Known RBP	13.67	□□□□□ -0.22
DMD-223	ENST00000475732	CHRNA2	Q15822	529 aa		13.67	□□□□□ -0.22
DMD-223	ENST00000475732	ARHGEF25	Q86VW2	580 aa		13.67	□□□□□ -0.22
DMD-223	ENST00000475732	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.67	□□□□□ -0.22
DMD-223	ENST00000475732	SLIT2	O94813	1529 aa		13.66	□□□□□ -0.22
DMD-223	ENST00000475732	ZNF772	Q68DY9	489 aa	Predicted RBP	13.66	□□□□□ -0.22
DMD-223	ENST00000475732	MORC1	Q86VD1	984 aa		13.66	□□□□□ -0.22
DMD-223	ENST00000475732	USP21	Q9UK80	565 aa		13.66	□□□□□ -0.22
DMD-223	ENST00000475732	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.66	□□□□□ -0.22
DMD-223	ENST00000475732	AATK	Q6ZMQ8	1374 aa		13.66	□□□□□ -0.22
DMD-223	ENST00000475732	NPC1L1	Q9UHC9	1359 aa		13.66	□□□□□ -0.22
DMD-223	ENST00000475732	LMO7	Q8WWI1	1683 aa		13.66	□□□□□ -0.22
DMD-223	ENST00000475732	COL18A1	P39060	1754 aa		13.66	□□□□□ -0.22
DMD-223	ENST00000475732	RGPD5	Q99666	1765 aa		13.66	□□□□□ -0.22
DMD-223	ENST00000475732	CC2D1B	Q5T0F9	858 aa	Known RBP	13.65	□□□□□ -0.22
DMD-223	ENST00000475732	BTG4	Q9NY30	223 aa		13.65	□□□□□ -0.22
DMD-223	ENST00000475732	ABCC6	O95255	1503 aa		13.64	□□□□□ -0.23
DMD-223	ENST00000475732	BCL9L	Q86UU0	1499 aa		13.64	□□□□□ -0.23
DMD-223	ENST00000475732	FBLN1	P23142	703 aa		13.64	□□□□□ -0.23
DMD-223	ENST00000475732	NRAP	Q86VF7	1730 aa		13.64	□□□□□ -0.23
DMD-223	ENST00000475732	CAMTA1	Q9Y6Y1	1673 aa		13.63	□□□□□ -0.23
DMD-223	ENST00000475732	TNNT2	P45379	298 aa	Predicted RBP	13.63	□□□□□ -0.23
DMD-223	ENST00000475732	CNGB1	Q14028	1251 aa	Predicted RBP	13.63	□□□□□ -0.23
DMD-223	ENST00000475732	RRS1	Q15050	365 aa	Known RBP	13.63	□□□□□ -0.23
DMD-223	ENST00000475732	UNC5CL	Q8IV45	518 aa		13.63	□□□□□ -0.23
DMD-223	ENST00000475732	RGS17	Q9UGC6	210 aa	Predicted RBP	13.63	□□□□□ -0.23
DMD-223	ENST00000475732	MAP3K19	Q56UN5	1328 aa		13.63	□□□□□ -0.23
DMD-223	ENST00000475732	AMPH	P49418	695 aa		13.62	□□□□□ -0.23
DMD-223	ENST00000475732	TRPC5	Q9UL62	973 aa	Predicted RBP	13.62	□□□□□ -0.23
DMD-223	ENST00000475732	RTL1	A6NKG5	1358 aa		13.61	□□□□□ -0.23
DMD-223	ENST00000475732	EVA1C	P58658	441 aa		13.61	□□□□□ -0.23
DMD-223	ENST00000475732	IP6K1	Q92551	441 aa		13.61	□□□□□ -0.23
DMD-223	ENST00000475732	QTRT2	Q9H974	415 aa	Known RBP	13.61	□□□□□ -0.23
DMD-223	ENST00000475732	STRN4	Q9NRL3	753 aa		13.61	□□□□□ -0.23
DMD-223	ENST00000475732	AXIN2	Q9Y2T1	843 aa		13.61	□□□□□ -0.23
DMD-223	ENST00000475732	KIF24	Q5T7B8	1368 aa		13.6	□□□□□ -0.23
DMD-223	ENST00000475732	HOXC9	P31274	260 aa		13.6	□□□□□ -0.23
DMD-223	ENST00000475732	BLM	P54132	1417 aa	Predicted RBP	13.6	□□□□□ -0.23
DMD-223	ENST00000475732	COL5A2	P05997	1499 aa	Predicted RBP	13.6	□□□□□ -0.23
DMD-223	ENST00000475732	FLT4	P35916	1363 aa		13.59	□□□□□ -0.23
DMD-223	ENST00000475732	PEAK1	Q9H792	1746 aa		13.59	□□□□□ -0.23
DMD-223	ENST00000475732	ATRN	O75882	1429 aa		13.59	□□□□□ -0.23
DMD-223	ENST00000475732	VPS72	Q15906	364 aa		13.59	□□□□□ -0.23
DMD-223	ENST00000475732	POLK	Q9UBT6	870 aa		13.59	□□□□□ -0.23
DMD-223	ENST00000475732	EMILIN1	Q9Y6C2	1016 aa		13.59	□□□□□ -0.23
DMD-223	ENST00000475732	PPM1G	O15355	546 aa	Predicted RBP	13.58	□□□□□ -0.24
DMD-223	ENST00000475732	POTEA	Q6S8J7	498 aa		13.58	□□□□□ -0.24
DMD-223	ENST00000475732	CCDC9	Q9Y3X0	531 aa	Known RBP	13.58	□□□□□ -0.24
DMD-223	ENST00000475732	CSB-PGBD3	P0DP91	1061 aa		13.57	□□□□□ -0.24
DMD-223	ENST00000475732	GJD4	Q96KN9	370 aa	Predicted RBP	13.57	□□□□□ -0.24
DMD-223	ENST00000475732	WDR17	Q8IZU2	1322 aa		13.57	□□□□□ -0.24
DMD-223	ENST00000475732	INSR	P06213	1382 aa		13.57	□□□□□ -0.24
DMD-223	ENST00000475732	FAM208A	Q9UK61	1670 aa	Known RBP	13.56	□□□□□ -0.24
DMD-223	ENST00000475732	SMG6	Q86US8	1419 aa	Known RBP	13.56	□□□□□ -0.24
DMD-223	ENST00000475732	SPDYE2B	A6NHP3	402 aa		13.56	□□□□□ -0.24
DMD-223	ENST00000475732	SPDYE6	P0CI01	402 aa		13.56	□□□□□ -0.24
DMD-223	ENST00000475732	RXRB	P28702	533 aa		13.56	□□□□□ -0.24
DMD-223	ENST00000475732	RBM6	P78332	1123 aa	Known RBP	13.56	□□□□□ -0.24
DMD-223	ENST00000475732	SPDYE2	Q495Y8	402 aa		13.56	□□□□□ -0.24
DMD-223	ENST00000475732	HSP90AB2P	Q58FF8	381 aa		13.56	□□□□□ -0.24
DMD-223	ENST00000475732	LARP1	Q6PKG0	1096 aa	Known RBP	13.56	□□□□□ -0.24
DMD-223	ENST00000475732	ANKRD24	Q8TF21	1146 aa		13.56	□□□□□ -0.24
DMD-223	ENST00000475732	ERBB3	P21860	1342 aa		13.56	□□□□□ -0.24
DMD-223	ENST00000475732	CRB1	P82279	1406 aa		13.56	□□□□□ -0.24
DMD-223	ENST00000475732	PITPNM1	O00562	1244 aa		13.55	□□□□□ -0.24
DMD-223	ENST00000475732	TOM1L2	Q6ZVM7	507 aa		13.55	□□□□□ -0.24
DMD-223	ENST00000475732	SPATA31A5	Q5VU36	1347 aa		13.55	□□□□□ -0.24
DMD-223	ENST00000475732	SPATA31A7	Q8IWB4	1347 aa		13.55	□□□□□ -0.24
DMD-223	ENST00000475732	PARD3	Q8TEW0	1356 aa		13.55	□□□□□ -0.24
DMD-223	ENST00000475732	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.55	□□□□□ -0.24
DMD-223	ENST00000475732	GLI3	P10071	1580 aa		13.54	□□□□□ -0.24
DMD-223	ENST00000475732	RGPD2	P0DJD1	1756 aa		13.54	□□□□□ -0.24
DMD-223	ENST00000475732	MTHFS	P49914	203 aa		13.54	□□□□□ -0.24
DMD-223	ENST00000475732	RALBP1	Q15311	655 aa		13.54	□□□□□ -0.24
DMD-223	ENST00000475732	PIP4P2	Q8N4L2	257 aa		13.54	□□□□□ -0.24
DMD-223	ENST00000475732	LTV1	Q96GA3	475 aa	Predicted RBP	13.54	□□□□□ -0.24
DMD-223	ENST00000475732	SPATA31A1	Q5TZJ5	1347 aa		13.54	□□□□□ -0.24
DMD-223	ENST00000475732	PPP2R1A	P30153	589 aa		13.53	□□□□□ -0.24
DMD-223	ENST00000475732	NLRP2	Q9NX02	1062 aa		13.53	□□□□□ -0.24
DMD-223	ENST00000475732	USP35	Q9P2H5	1018 aa		13.53	□□□□□ -0.24
DMD-223	ENST00000475732	CARD10	Q9BWT7	1032 aa		13.52	□□□□□ -0.25
DMD-223	ENST00000475732	THRAP3	Q9Y2W1	955 aa	Known RBP	13.52	□□□□□ -0.25
DMD-223	ENST00000475732	TCP11L2	Q8N4U5	519 aa		13.51	□□□□□ -0.25
DMD-223	ENST00000475732	WNK3	Q9BYP7	1800 aa		13.5	□□□□□ -0.25
DMD-223	ENST00000475732	FAM98C	Q17RN3	349 aa	Known RBP	13.5	□□□□□ -0.25
DMD-223	ENST00000475732	BARGIN	Q6ZT62	677 aa		13.5	□□□□□ -0.25
DMD-223	ENST00000475732	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms