RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 KCTD15Q96SI1 283 aaPredicted RBP13.52□□□□□ -0.25
SMC5-203ENST00000475540 MYT1Q01538 1121 aa13.51□□□□□ -0.25
SMC5-203ENST00000475540 NBPF20Q3BBV1 942 aa13.51□□□□□ -0.25
SMC5-203ENST00000475540 FSHRP23945 695 aa13.5□□□□□ -0.25
SMC5-203ENST00000475540 EIF4G2P78344 907 aaKnown RBP eCLIP13.49□□□□□ -0.25
SMC5-203ENST00000475540 CTC1Q2NKJ3 1217 aa13.49□□□□□ -0.25
SMC5-203ENST00000475540 VAC14Q08AM6 782 aa13.48□□□□□ -0.25
SMC5-203ENST00000475540 AXIN1O15169 862 aa13.47□□□□□ -0.25
SMC5-203ENST00000475540 SMCPP49901 116 aaPredicted RBP13.46□□□□□ -0.25
SMC5-203ENST00000475540 NR3C2P08235 984 aa13.45□□□□□ -0.26
SMC5-203ENST00000475540 CCDC116Q8IYX3 515 aa13.45□□□□□ -0.26
SMC5-203ENST00000475540 CRIPAKQ8N1N5 446 aa13.45□□□□□ -0.26
SMC5-203ENST00000475540 CLUAP1Q96AJ1 413 aa13.45□□□□□ -0.26
SMC5-203ENST00000475540 WDR4P57081 412 aaKnown RBP13.44□□□□□ -0.26
SMC5-203ENST00000475540 DHX9Q08211 1270 aaKnown RBP13.44□□□□□ -0.26
SMC5-203ENST00000475540 AAASQ9NRG9 546 aa13.44□□□□□ -0.26
SMC5-203ENST00000475540 CAPN5O15484 640 aaPredicted RBP13.43□□□□□ -0.26
SMC5-203ENST00000475540 EMILIN1Q9Y6C2 1016 aa13.43□□□□□ -0.26
SMC5-203ENST00000475540 ST8SIA5O15466 376 aa13.42□□□□□ -0.26
SMC5-203ENST00000475540 RAB15P59190 212 aa13.42□□□□□ -0.26
SMC5-203ENST00000475540 INTS6LQ5JSJ4 861 aaKnown RBP13.42□□□□□ -0.26
SMC5-203ENST00000475540 SEPT12Q8IYM1 358 aa13.42□□□□□ -0.26
SMC5-203ENST00000475540 ESPNB1AK53 854 aa13.41□□□□□ -0.26
SMC5-203ENST00000475540 GIGYF1O75420 1035 aaPredicted RBP13.41□□□□□ -0.26
SMC5-203ENST00000475540 RNF20Q5VTR2 975 aa13.41□□□□□ -0.26
SMC5-203ENST00000475540 ZIC2O95409 532 aaPredicted RBP13.4□□□□□ -0.26
SMC5-203ENST00000475540 TIMP2P16035 220 aa13.4□□□□□ -0.26
SMC5-203ENST00000475540 SOX11P35716 441 aa13.4□□□□□ -0.26
SMC5-203ENST00000475540 SEMA3FQ13275 785 aa13.4□□□□□ -0.26
SMC5-203ENST00000475540 PPP1R26Q5T8A7 1209 aaPredicted RBP13.4□□□□□ -0.26
SMC5-203ENST00000475540 KLF16Q9BXK1 252 aaPredicted RBP13.4□□□□□ -0.26
SMC5-203ENST00000475540 PGPEP1Q9NXJ5 209 aa13.4□□□□□ -0.26
SMC5-203ENST00000475540 CEP126Q9P2H0 1117 aa13.4□□□□□ -0.26
SMC5-203ENST00000475540 A6NJR5 290 aa13.39□□□□□ -0.27
SMC5-203ENST00000475540 LCE2BO14633 110 aa13.39□□□□□ -0.27
SMC5-203ENST00000475540 CCDC125Q86Z20 511 aa13.39□□□□□ -0.27
SMC5-203ENST00000475540 PROSER2Q86WR7 435 aaPredicted RBP13.38□□□□□ -0.27
SMC5-203ENST00000475540 TRIM52Q96A61 297 aa13.38□□□□□ -0.27
SMC5-203ENST00000475540 ITPKCQ96DU7 683 aa13.38□□□□□ -0.27
SMC5-203ENST00000475540 ERVH48-1M5A8F1 160 aa13.36□□□□□ -0.27
SMC5-203ENST00000475540 ZFAND3Q9H8U3 227 aa13.36□□□□□ -0.27
SMC5-203ENST00000475540 FNBP4Q8N3X1 1017 aaPredicted RBP13.34□□□□□ -0.27
SMC5-203ENST00000475540 DACH1Q9UI36 760 aa13.34□□□□□ -0.27
SMC5-203ENST00000475540 SLFNL1Q499Z3 407 aa13.33□□□□□ -0.28
SMC5-203ENST00000475540 TMPRSS4Q9NRS4 437 aa13.33□□□□□ -0.28
SMC5-203ENST00000475540 ALG2Q9H553 416 aa13.31□□□□□ -0.28
SMC5-203ENST00000475540 ATP13A2Q9NQ11 1180 aa13.31□□□□□ -0.28
SMC5-203ENST00000475540 POM121CA8CG34 1229 aa13.29□□□□□ -0.28
SMC5-203ENST00000475540 ZNF784Q8NCA9 323 aaPredicted RBP13.29□□□□□ -0.28
SMC5-203ENST00000475540 PCDHB11Q9Y5F2 797 aa13.29□□□□□ -0.28
SMC5-203ENST00000475540 UPP2O95045 317 aa13.28□□□□□ -0.28
SMC5-203ENST00000475540 HDGFL1Q5TGJ6 251 aa13.28□□□□□ -0.28
SMC5-203ENST00000475540 RNF135Q8IUD6 432 aa13.28□□□□□ -0.28
SMC5-203ENST00000475540 ZMYND15Q9H091 742 aa13.28□□□□□ -0.28
SMC5-203ENST00000475540 CBLBQ13191 982 aa13.27□□□□□ -0.29
SMC5-203ENST00000475540 SCARF1Q14162 830 aa13.27□□□□□ -0.29
SMC5-203ENST00000475540 MRPL14Q6P1L8 145 aaKnown RBP13.27□□□□□ -0.29
SMC5-203ENST00000475540 PHTF2Q8N3S3 785 aa13.27□□□□□ -0.29
SMC5-203ENST00000475540 ESF1Q9H501 851 aaKnown RBP13.27□□□□□ -0.29
SMC5-203ENST00000475540 BMP1P13497 986 aa13.26□□□□□ -0.29
SMC5-203ENST00000475540 Q6ZVU0 165 aa13.26□□□□□ -0.29
SMC5-203ENST00000475540 MEIOBQ8N635 442 aa13.26□□□□□ -0.29
SMC5-203ENST00000475540 TRAK2O60296 914 aa13.25□□□□□ -0.29
SMC5-203ENST00000475540 TRIM46Q7Z4K8 759 aa13.25□□□□□ -0.29
SMC5-203ENST00000475540 SENP2Q9HC62 589 aa13.25□□□□□ -0.29
SMC5-203ENST00000475540 CYLDQ9NQC7 956 aa13.25□□□□□ -0.29
SMC5-203ENST00000475540 LILRA1O75019 489 aa13.24□□□□□ -0.29
SMC5-203ENST00000475540 CCDC85AQ96PX6 553 aaPredicted RBP13.24□□□□□ -0.29
SMC5-203ENST00000475540 TSEN34Q9BSV6 310 aaKnown RBP13.24□□□□□ -0.29
SMC5-203ENST00000475540 GMPR2Q9P2T1 348 aaKnown RBP13.24□□□□□ -0.29
SMC5-203ENST00000475540 ZNF787Q6DD87 383 aa13.23□□□□□ -0.29
SMC5-203ENST00000475540 CC2D2BQ6DHV5 1058 aa13.23□□□□□ -0.29
SMC5-203ENST00000475540 ADD1P35611 737 aaKnown RBP13.22□□□□□ -0.29
SMC5-203ENST00000475540 DOLKQ9UPQ8 538 aa13.22□□□□□ -0.29
SMC5-203ENST00000475540 BMP2P12643 396 aa13.21□□□□□ -0.29
SMC5-203ENST00000475540 ERVK-9P63128 1117 aa13.21□□□□□ -0.29
SMC5-203ENST00000475540 MAP7D1Q3KQU3 841 aa13.21□□□□□ -0.29
SMC5-203ENST00000475540 TSGA10IPQ3SY00 556 aa13.21□□□□□ -0.29
SMC5-203ENST00000475540 C6orf118Q5T5N4 469 aa13.21□□□□□ -0.29
SMC5-203ENST00000475540 LINC00528Q8N1L1 170 aa13.21□□□□□ -0.29
SMC5-203ENST00000475540 ADAMTS19Q8TE59 1207 aa13.21□□□□□ -0.29
SMC5-203ENST00000475540 KIFC2Q96AC6 838 aa13.21□□□□□ -0.29
SMC5-203ENST00000475540 ZFP42Q96MM3 310 aa13.21□□□□□ -0.29
SMC5-203ENST00000475540 PURBQ96QR8 312 aaKnown RBP13.21□□□□□ -0.29
SMC5-203ENST00000475540 C11orf95C9JLR9 678 aaPredicted RBP13.2□□□□□ -0.3
SMC5-203ENST00000475540 USP4Q13107 963 aa13.2□□□□□ -0.3
SMC5-203ENST00000475540 GLMNQ92990 594 aa13.2□□□□□ -0.3
SMC5-203ENST00000475540 CDCA7Q9BWT1 371 aaPredicted RBP13.2□□□□□ -0.3
SMC5-203ENST00000475540 CHIC2Q9UKJ5 165 aa13.2□□□□□ -0.3
SMC5-203ENST00000475540 ZNF777Q9ULD5 760 aaPredicted RBP13.2□□□□□ -0.3
SMC5-203ENST00000475540 POTECB2RU33 542 aa13.19□□□□□ -0.3
SMC5-203ENST00000475540 MYCP01106 439 aaPredicted RBP13.19□□□□□ -0.3
SMC5-203ENST00000475540 ADH1AP07327 375 aa13.19□□□□□ -0.3
SMC5-203ENST00000475540 C14orf37Q86TY3 774 aa13.19□□□□□ -0.3
SMC5-203ENST00000475540 PLPP7Q8NBV4 271 aa13.19□□□□□ -0.3
SMC5-203ENST00000475540 SIRT1Q96EB6 747 aa13.19□□□□□ -0.3
SMC5-203ENST00000475540 CALR3Q96L12 384 aaKnown RBP13.19□□□□□ -0.3
SMC5-203ENST00000475540 AGBL1Q96MI9 1066 aa13.19□□□□□ -0.3
SMC5-203ENST00000475540 SKIP12755 728 aa13.18□□□□□ -0.3
SMC5-203ENST00000475540 SCTRP47872 440 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms